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9,302 results for “DETECT”
BRAIN Journal-New Computer Assisted Diagnostic to Detect Alzheimer Disease-Figure 18. Accuracy of classification using the three methods, KNN, SVM and our method, for normal subjects
<p>We present three figures representing the accuracy of the classification using the three methods, KNN, SVM and our method for normal, MCI and Alzheimer subjects. </p>
BRAIN Journal-New Computer Assisted Diagnostic to Detect Alzheimer Disease-Figure 17. The results of calculating the Hausdorff distances
<p>The results of calculating the Hausdorff distances, Dice, PSNR, MSSD for the four methods<br> (Caselles Chan & Vese, Lanktom, our method) and the ground truth about a Normal subject following the<br> Corpus Calosum segmentation. </p> <p> </p>
BRAIN Journal-New Computer Assisted Diagnostic to Detect Alzheimer Disease-Figure 16. Results of calculating the Hausdorff distances
<p>Results of calculating the Hausdorff distances, Dice, PSNR, MSSD between the four methods (Caselles Chan & Vese, Lanktom, our method) and the ground truth about a subject Normal following segmentation of the Corpus Calosum.</p>
BRAIN Journal-New Computer Assisted Diagnostic to Detect Alzheimer Disease-Figure 15. The results of calculating the Hausdorff distances
<p>The results of calculating the Hausdorff distances, Dice, PSNR, MSSD for the four methods (Caselles Chan & Vese, Lanktom, our method) and the ground truth about a Normal subject following the Corpus Calosum segmentation.</p>
BRAIN Journal-New Computer Assisted Diagnostic to Detect Alzheimer Disease-Figure 14. A comparison between the results
<p> A comparison between the results. Each column shows the superposition of the corresponding results: Caselle (yellow curve), Chan & Vese (curve blue) Lankton (red curve), our method (purple line) and the ground truth (Curve Green) for a normal subject, MCI and AD.</p>
BRAIN Journal-New Computer Assisted Diagnostic to Detect Alzheimer Disease-Figure 13.The results of the Corpus Calosum segmentation.
<p> The results of the Corpus Calosum segmentation. The six lines present in order: image zoom on the hippocampus area, manually segmented image, the result of the Caselle method , the result of the Chan&Vese method, the result of the Lankton method, the result of our method. Column 1 shows a healthy subject, column 2 MCI (primary stage), and the third column corresponds to an Alzheimer's subject (advanced stage). </p>
BRAIN Journal-New Computer Assisted Diagnostic to Detect Alzheimer Disease-Figure 12. Results of calculating the Hausdorff distances
<p>The figure shows the calculation results of the four distances: Dice, PSNR, Hausdorff and MSS using the four methods (Caselles Chan & Vese, Lankton, our method), compared with the ground truth on three samples.</p>
BRAIN Journal-New Computer Assisted Diagnostic to Detect Alzheimer Disease-Figure 11. Results of calculating the Hausdorff distance
<p>The figure shows the calculation results of the four distances: Dice, PSNR, Hausdorff and MSS using the four methods (Caselles Chan & Vese, Lankton, our method), compared with the ground truth on three samples.</p> <p> Results of calculating the Hausdorff distances, Dice, PSNR, MSSD between the four methods (Caselles Chan & Vese, Lanktom, our method) .and the ground truth about a MCI subject following segmentation of the hippocampus.</p>
BRAIN Journal-New Computer Assisted Diagnostic to Detect Alzheimer Disease-Figure 10. The results of calculating the Hausdorff distances, Dice, PSNR, MSSD between the four methods
<p>The figure shows the calculation results of the four distances: Dice, PSNR, Hausdorff and MSS using the four methods (Caselles Chan & Vese, Lankton, our method), compared with the ground truth on three samples.</p> <p>The results of calculating the Hausdorff distances, Dice, PSNR, MSSD between the four methods (Caselles, Chan & Vese, Lanktom, and our method) and the ground truth about a subject Normal following the segmentation of the hippocampus</p> <p> </p>
BRAIN Journal-New Computer Assisted Diagnostic to Detect Alzheimer Disease-Figure 9. A comparison between the results
<p>In figure 9 we present a comparison between the manual segmentation, Caselle, Chan&vese, Lankton and our method. </p> <p>A comparison between the results. Each column shows the superposition of the corresponding results: Caselle (yellow curve), Chan & Vese (curve blue), Lankton (red curve), our method (purple curve), and the ground truth (Green Curve) for a normal subject, MCI and AD.</p>
BRAIN Journal-New Computer Assisted Diagnostic to Detect Alzheimer Disease-Figure 8. The results of the segmentation of the hippocampus.
<p>The results show the hippocampus segmentation using both Caselle, Chan&Vese, Lankton and our method. </p> <p>The results of the segmentation of the hippocampus. The six lines present: image zoom on the hippocampus area, manually segmented image, the result of the Caselle method, the result of the Chan&Vese method, the result of the Lankton method, the result of our method. Column 1 shows a healthy subject, column 2 shows a MCI (primary stage) and the third column corresponds to an Alzheimer's subject (advanced stage)</p>
BRAIN Journal-New Computer Assisted Diagnostic to Detect Alzheimer Disease-Figure 7. Training for classification
<p>AMED measures the average distance while HD measures the maximum distance between the two vectors. The aim of our method is to classify the test subject in three classes (N, MCI or AD), so for each vector element E we look for the four nearest neighbors. </p>
BRAIN Journal-New Computer Assisted Diagnostic to Detect Alzheimer Disease-Figure 5. Improvement using variation
<p>In the figures below a constraint of the variation is used in order to show the limits. The contour may include more areas surrounding the hippocampus, which are not homogeneous with the desired area. Through the confidence interval of variation and priori knowledge can overcome these limitations. </p>
BRAIN Journal-New Computer Assisted Diagnostic to Detect Alzheimer Disease-Figure 6. Improvement using Surface
<p>In the figures below, a constraint of the surface is used to show the limits. The contour may include the hippocampus and more areas surrounding it, which are homogeneous with the desired area. Through the surface of the confidence interval and priori knowledge can overcome these limitations. </p>
BRAIN Journal-New Computer Assisted Diagnostic to Detect Alzheimer Disease-Figure 2. Three Corpus Calosum: Normal, MCI, AD
<p>The three figures above present the Corpus Callosum relating to three topics: Normal Topic by MCI (Mild Cognitive Impairment), Alzheimer’s topic. Secondly, we will present our clustering method to classify the test subject between 3 classes: N (Normal), MCI (Mild Cognitive Impairment), and AD (Alzheimer's disease). </p>
BRAIN Journal-New Computer Assisted Diagnostic to Detect Alzheimer Disease-Figure 1. Three hippocampus: Normal, MCI, AD
<p>In this context is our work: performing a diagnostic computer-aided system for detecting Alzheimer's disease. Like any diagnostic system, our system contains three parts: preprocessing, segmentation and classification. Initially, we will present a new segmentation method to segment the Hippocampus and Corpus Callosum regardless of the patient's condition. </p>
BRAIN Journal-New Computer Assisted Diagnostic to Detect Alzheimer Disease-Figure 4. Training
<p> A. Segmentation It seeks to establish a model that describes the shape and typical fluctuations. This requires first the preparation of a learning base to reflect the possible variations in shape of the structure. The preparation of the training set Each shape will be modeled by a vector X, built by concatenating the coordinates of the characteristic points placed on its outline: X=(X1, X2,…...Xn) (1) The training set can be modeled by a set of vectors: {Xi} Where i = 1. . N {N number of sample images} and {Si} surface, {Vi} standard deviation of the Area. The principle of this step is be illustrated by the figure below. </p>
BRAIN Journal-New Computer Assisted Diagnostic to Detect Alzheimer Disease-Figure 3.Proposed Computer Assisted Diagnosis
<p>The figure below presents our proposed Computer Assisted Diagnosis. Our CAD includes 3 steps: Preprocessing, Segmentation and Classification. For the step of preprocessing, we used the NLMS (Non Local Means) to improve the quality of image. For the step of segmentation: we have a learning phase to extract the different shapes and to determine the average shape. Our proposed automatic method is based on the deformable model. For the step of classification, we present a new supervised method to distinguish between Normal, MCI and AD. The figure below presents our proposed system.</p>
BRAIN Journal-New Computer Assisted Diagnostic to Detect Alzheimer Disease-Figure 4. Training
<p>Each shape will be modeled by a vector X, built by concatenating the coordinates of the characteristic points placed on its outline: X=(X1, X2,…...Xn) (1) The training set can be modeled by a set of vectors: {Xi} Where i = 1. . N {N number of sample images} and {Si} surface, {Vi} standard deviation of the Area. The principle of this step is be illustrated by the figure below. </p>
Experiments for detection of Plasmodium berghei infected Anopheles stephensi mosquitoes using near-infrared spectroscopy
<p> </p> <p><strong>Experiments for detection of <em>Plasmodium berghei</em> infected <em>Anopheles stephensi</em> mosquitoes using near-infrared spectroscopy</strong></p> <p>This dataset contains near-infrared spectroscopy (NIRS) measurements on <em>Plasmodium berghei</em> infected <em>Anopheles stephensi</em> mosquitoes reared in the lab together with either oocyst counts or sporozoite counts, correponding to the two experiments undertaken:</p> <ul> <li>Experiment 1 (oocysts), file "NIRSdata2017_Lab_AnSteph_PlasmBerg_oocysts.txt"</li> <li>Experiment 2 (sporozoites), file "NIRSdata2017_Lab_AnSteph_PlasmBerg_sporozoites.txt"</li> </ul> <p>For further details on the experimental setup see: P.M. Esperança, A.M. Blagborough, D.F. Da, F.E. Dowell, T.S. Churcher (2018) "Detection of <em>Plasmodium berghei</em> infected <em>Anopheles stephensi</em> using near-infrared spectroscopy". <em>Parasites and Vector</em>, <strong>11</strong>:377. <a href="https://doi.org/10.1186/s13071-018-2960-z">https://doi.org/10.1186/s13071-018-2960-z</a>.</p> <p>The structure of the data files is as follows:</p> <ul> <li>column 1 (<strong>Scan_ID</strong>): scan identifier</li> <li>column 2 (<strong>Mosquito_ID</strong>): mosquito identifier</li> <li>column 3 (<strong>Replication</strong>): replication identifier</li> <li>column 4 (<strong>Oocysts</strong> or <strong>Sporozoites</strong>): response variable <ul> <li>for the Experiment 1, the oocyst count<em> </em>on a level-scale</li> <li>for the Experiment 2, the sporozoite count on a log-scale: 0 (no sporozoites), 1 (1–10), 2 (11–100), 3 (101–1000), 4 (>1000)</li> </ul> </li> <li>columns 5 to 2155 (<strong>x350</strong> to <strong>x2500</strong>): NIRS absorbance measurements for wavelengths in the range 350 to 2500 nanometers</li> </ul> <p> </p>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.