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Supplementary material 2 from: Senderov V, Georgiev T, Penev L (2016) Online direct import of specimen records into manuscripts and automatic creation of data papers from biological databases . Research Ideas and Outcomes 2: e10617. https://doi.org/10.3897/rio.2.e10617
This spreadsheet contains the information about the specimen API's of GBIF, BOLD Systems, iDigBio, and PlutoF. It lists the endpoints and the documentation URLs in the sheet named "APIs". In the sheet named "Mappings" it lists how to map the non-DwC compliant APIs (BOLD and PlutoF) to DwC-terms.
Supplementary material 1 from: Talamas EJ, Pham H-T (2017) An online photographic catalog of Platygastroidea (Hymenoptera) in the Institute of Ecology and Biological Resources (Hanoi, Vietnam), with some taxonomic notes. In: Talamas EJ, Buffington ML (Eds) Advances in the Systematics of Platygastroidea. Journal of Hymenoptera Research 56: 225-239. https://doi.org/10.3897/jhr.56.10214
Platygastroidea in IEBR : Explanation note: A table lists the species of Platygastroidea, the author of the species, how many specimens are present in IEBR, including type status, and collecting unit identifiers for specimens that have been photographed.
Supplementary material 3 from: Senderov V, Georgiev T, Penev L (2016) Online direct import of specimen records into manuscripts and automatic creation of data papers from biological databases . Research Ideas and Outcomes 2: e10617. https://doi.org/10.3897/rio.2.e10617
This archive contains XSLT transformations from EML v. 2.1.1 and v. 2.1.0 to Pensoft data paper format.
Supplementary material 1 from: Báthori F, Pfliegler WP, Zimmerman C-U, Tartally A (2017) Online image databases as multi-purpose resources: discovery of a new host ant of Rickia wasmannii Cavara (Ascomycota, Laboulbeniales) by screening AntWeb.org. Journal of Hymenoptera Research 61: 85-94. https://doi.org/10.3897/jhr.61.20255
Online image databases as multi-purpose resources: Rickia wasmannii Cavara (Ascomycota, Laboulbeniales) on a new host ant from a new country by screening AntWeb.org :
Impact of Learning Satisfaction on Achievement Perception in Adult Online Education
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Online Appendix
<div> <p>Simulation data used for the article "On the Limited Observability of Energy Community Members: An Uncertainty-Aware Near-Optimal Bilevel Programming Approach" submitted for peer-review", May 2024.</p> <p> </p> </div>
Dataset - No Reference Image Quality assessment Scores for Humanities Online Repositories
<p>The dataset contains data on No-Reference Image Quality Assessment (NR-IQA) scores for online repositories in the humanities.</p>
Online Auctions Dataset
<h2>Content</h2> <p>The datasets contain eBay auction information on Cartier wristwatches, Palm Pilot M515 PDAs, Xbox game consoles, and Swarowski beads.</p> <p><strong>auction.csv</strong> includes 9 variables:</p> <ul> <li> <p><strong>auctionid</strong>: unique identifier of an auction</p> </li> <li> <p><strong>bid</strong>: the proxy bid placed by a bidder</p> </li> <li> <p><strong>bidtime</strong>: the time in days that the bid was placed, from the start of the auction</p> </li> <li> <p><strong>bidder</strong>: eBay username of the bidder</p> </li> <li> <p><strong>bidderrate</strong>: eBay feedback rating of the bidder</p> </li> <li> <p><strong>openbid</strong>: the opening bid set by the seller</p> </li> <li> <p><strong>price</strong>: the closing price that the item sold for (equivalent to the second highest bid + an increment)</p> </li> <li> <p><strong>item</strong>: auction item</p> </li> <li> <p><strong>auction_type</strong></p> </li> </ul> <p><strong>swarovski.csv</strong> includes 5 variables:</p> <ul> <li> <p><strong>Seller</strong></p> </li> <li> <p><strong>Bidder</strong></p> </li> <li> <p><strong>Weight</strong></p> </li> <li> <p><strong>Bidder.Volume</strong></p> </li> <li> <p><strong>Seller.Volume</strong></p> </li> </ul> <h2>Acknowledgements</h2> <p>The original dataset can be found <a href="http://www.modelingonlineauctions.com/datasets" target="_blank" rel="nofollow noopener noreferrer">here</a>.</p> <h2>Inspiration</h2> <p>Some ideas worth exploring:</p> <ul> <li>For each item, what is the relationship between bids, bid time, and the closing price? Does this differ by length of the auction, opening bid, or by bidder rating?</li> </ul>
Dataset: Bengali Online Comments
<p>This dataset contains almost 16,000 Bengali comments collected manually, each annotated with labels indicating different categories of content: troll, sexual, religious, threat, and non-bully. The data is organized in an Excel file. Designed for NLP tasks such as content classification, moderation, and toxicity detection, this dataset is particularly useful for applications in social media monitoring, automated content moderation, and the analysis of user-generated content in Bengali, enabling the detection and filtering of potentially harmful or inappropriate comments.</p>
Data for "Improving semantic video retrieval models by training with a relevance-aware online mining strategy"
<p>This repository contains all the data available for the publication:</p> <p><a href="https://doi.org/10.1016/j.cviu.2024.104035">Alex Falcon, Giuseppe Serra, and Oswald Lanz. <em>Improving semantic video retrieval models by training with a relevance-aware online mining strategy</em>. <strong>Computer Vision and Image Understanding</strong>. 2024.</a></p> <p>Code is available at: <a href="https://github.com/aranciokov/ranp/">https://github.com/aranciokov/ranp/</a></p> <p>The data includes:</p> <ul> <li>pre-extracted features (ordered_feature_*.zip files)</li> <li>annotations, such as pre-extracted semantic graphs, glove checkpoints, class annotations, etc (annotations_*.zip files)</li> <li>train/val/test, when available, split information (public_split_*.zip) files</li> <li>pretrained models for HGR and EAO (details in the github repo)</li> </ul>
Functional profiles of 14 strains of Salinicola using EggNOG online service
<p>Functional profiles of 14 Salinicola strains using the EggNOG online service (http://eggnog-mapper.embl.de).</p> <p>The zip file contains tsv and xlsx files generated using eggNOG to classify the gene-encoding proteins according to the next EggNOG categories:</p> <p>*Information Storage and Processing*<br>A) RNA processing and modification <br>B) Chromatin structure and dynamics<br>J) Translation, ribosomal structure and biogenesis<br>K) Transcription<br>L) Replication, recombination and repair <br>*Cellular processes and signaling*<br>D) Cell cycle control, cell division, chromosome partitioning <br>M) Cell wall/membrane/envelope biogenesis <br>N) Cell motility <br>O) Posttranslational modification, protein turnover, chaperones <br>T) Signal transduction mechanisms <br>U) Intracellular trafficking, secretion, and vesicular transport <br>V) Defense mechanisms <br>*Metabolism*<br>C) Energy production and conversion <br>E) Amino acid transport and metabolism <br>F) Nucleotide transport and metabolism<br>G) Carbohydrate transport and metabolism <br>H) Coenzyme transport and metabolism <br>I) Lipid transport and metabolism <br>P) Inorganic ion transport and metabolism <br>Q) Secondary metabolites biosynthesis, transport and catabolism <br>*Poorly characterized<br>S) Function unknown </p> <div> <pre>-. .-. .-. .-. .-. .-. . ||\|||\ /|||\|||\ /|||\|||\ /| |/ \|||\|||/ \|||\|||/ \|||\|| ~ `-~ `-` `-~ `-` `-~ `- </pre> </div> <p>Profiles generated on 3 June 2024</p> <p> </p>
Dataset Klöckner_et_al 2024 paper (Understanding users of online energy efficiency counselling: Comparison to representative samples in Norway)
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Examining the mediating role of damage control and cooperation on the relationship between self-image and behavioral impulsivity in online social media among adolescents
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Artificial datasets for "Online Conformance Checking Using Behavioural Patterns"
<p>Dataset containing artificial datasets for the stress test of the online conformance prototype and for the correlation of the results of the online conformance checker with state of the art technique.</p> <p><strong>Stress test log</strong></p> <p>We randomly generated a BPMN model containing 64 activities and 26 gateways. The model was then used to simulate an event stream of 2 million events.</p> <p><strong>Correlation logs</strong></p> <p>We generated 12 random process models with number of activities according to a triangular distribution with lower bound 10, mode 20, and upper bound 30. We did not include duplicate labels, a probability of 0.2 for addition of silent activities, moreover, the probability of control-flow operator insertion was: 0.45 for sequence, 0.2 for parallel and xor-split operators, 0.05 for an inclusive-or operator and 0.1 for loop constructs. Incremental noise levels (both on a trace- and event-level) were introduced in the logs. Probability of trace- and event-level noises ranged from 0.1 to 0.5 with steps of 0.1.</p>
A brief online transdiagnostic measure: psychometric properties of the Overall Anxiety Severity and Impairment Scale (OASIS) among Spanish patients with emotional disorders
<p>This dataset contains demographic and clinical data about 583 patients with anxiety and depressive disorders that participated in a study whose objective is to examine the psychometric properties of the online version of the Overall Anxiety Severity and Impairment Scale in Spanish clinical population. </p>
Comportamento do Consumidor de Canais Cruzados: Efeitos nas Compras Online e Offline
<p>This data support the paper "Comportamento do Consumidor de Canais Cruzados: Efeitos nas Compras Online e Offline" published by Revista de Administração Contemporânea.</p>
FIGURE 78 in Historical review, catalog of type specimens and online database of the ichthyology collection of the Instituto de Ciencias Naturales of the Universidad Nacional de Colombia (ICN-MHN)
FIGURE 78. Holotype of Mesonauta egregius ICN-MHN 1686 (scale bar = 1 cm). Photo by Jorge García Melo.
FIGURE 77 in Historical review, catalog of type specimens and online database of the ichthyology collection of the Instituto de Ciencias Naturales of the Universidad Nacional de Colombia (ICN-MHN)
FIGURE 77. Holotype of Cichlasoma microlepis ICN-MHN 95 (scale bar = 1 cm). Photo by Jorge García Melo.
FIGURE 75 in Historical review, catalog of type specimens and online database of the ichthyology collection of the Instituto de Ciencias Naturales of the Universidad Nacional de Colombia (ICN-MHN)
FIGURE 75. Paratype of Opistognathus fenmutis ICN-MHN 2486 (scale bar = 1 cm). Photo by Jorge García Melo.
FIGURE 74 in Historical review, catalog of type specimens and online database of the ichthyology collection of the Instituto de Ciencias Naturales of the Universidad Nacional de Colombia (ICN-MHN)
FIGURE 74. Holotype of Halichoeres malpelo ICN-MHN 1784 (scale bar = 1 cm). Photo by Jorge García Melo.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.