Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
1,353
datasets available to search
ShareScore release 0.9.0
Dataset results
1,353 results for “single-cell transcriptomics”
Atf3 controls transitioning in female mitochondrial cardiomyopathy as identified by single-cell transcriptomics [snRNA-seq]
GEO Series GSE242820. Mus musculus; Homo sapiens. 5 samples. Type: Expression profiling by high throughput sequencing.
Cell type purification by single-cell transcriptome-trained sorting
GEO Series GSE112438. Danio rerio; Homo sapiens. 73 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
Cell type inference in human lung tissue by domain adaptation of single-cell and spatial transcriptomic data
GEO Series GSE172416. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing; Other.
Single-cell transcriptomic analysis of blood T cells from healthy controls, MS patients and COVID-19 patients by 10X genomics
GEO Series GSE193770. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
Deciphering transcriptome alterations in bone marrow hematopoiesis at single-cell resolution in immune thrombocytopenia
GEO Series GSE196676. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Comprehensive Single-Cell Chromatin and Transcriptomic Profiling of Peripheral Immune Cells in Non-Segmental Vitiligo
GEO Series GSE282793. Homo sapiens. 22 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-Cell Epitope-Transcriptomics Reveal Lung Stromal and Immune Cell Response Kinetics to Nanoparticle-delivered RIG-I and TLR4 Agonists
GEO Series GSE220436. Mus musculus. 5 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic and Single-Cell Analysis Reveals Regulatory Networks and Cellular Heterogeneity in Mouse Sjögren’s Syndrome Salivary Glands
GEO Series GSE175649. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Dissecting the Transcriptomic Landscape of Circulating Mononuclear Phagocytes in Langerhans Cell Histiocytosis at Single-cell Level
GEO Series GSE151713. Homo sapiens. 38 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic profiling of the zebrafish inner ear reveals molecularly distinct hair cell and supporting cell subtypes
GEO Series GSE211728. Danio rerio. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Transcriptomic Profiling of Xenotransplanted Retinal Organoids Derived from the WA09 CRX-tdTomato Human Embryonic Stem Cell Line
GEO Series GSE285393. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
A reference single-cell regulomic and transcriptomic map of cynomolgus monkeys
GEO Series GSE196794. Macaca fascicularis. 28 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Resolving single-cell gene expression by pseudo-temporal integration of transcriptomic and proteomic datasets.
GEO Series GSE273172. Homo sapiens. 5 samples. Type: Expression profiling by high throughput sequencing.
Integrated single-cell transcriptomics and functional genomics reveal RAD51B as an essential gene in near-haploid leukemia
GEO Series GSE201080. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics of human iPSC differentiation dynamics reveal a core molecular network of Parkinson’s disease
GEO Series GSE183248. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Liver Single-Cell Transcriptome Analysis of Cell-specific Dysregulation of Liver Cell Biology Following Intravenous Administration of AAV Vectors
GEO Series GSE124560. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
Developmental single-cell transcriptomics in the Lytechinus variegatus sea urchin embryo
GEO Series GSE184538. Lytechinus variegatus. 19 samples. Type: Expression profiling by high throughput sequencing.
Temporally resolved single-cell transcriptomics defines immune dysfunction trajectories in glioblastoma
GEO Series GSE232040. Mus musculus. 167 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic analysis of human hepatocellular carcinoma
GEO Series GSE146115. Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome conservation in a comparative analysis of fresh and cryopreserved human skin tissue: pilot in localized scleroderma
GEO Series GSE160536. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.