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7,370 results for “supplementation”
Supplemental Materials for "Convective boundary mixing in main-sequence stars: theory and empirical constraints"
<p>MESA inlists and data products used for generating the figures of the review paper: "Convective boundary mixing in main-sequence stars: theory and empirical constraints".</p>
Image Supplement to Hounshell, "Lines, Points, Waves, Streams. Mapping Ethnographic Types in Swiss Hausforschung, 1880s–1950s"
<p><strong>General description</strong>: The images in this repository are provided as a color supplement to the figures printed in black and white or otherwise mentioned in the following article: Eric Hounshell, “Lines, Points, Waves, Streams. Mapping Ethnographic Types in Swiss <em>Hausforschung</em>, 1880s–1950s,” <em>Historische Anthropologie</em> 31:1 (2023), 130-164 [DOI forthcoming]. All images are credited to Jakob Hunziker (1827-1901).</p> <p><strong>Image References</strong>:</p> <p>Fig. 1: Die Verbreitung der Hausformen in der Schweiz, in: Jakob Hunziker, Das Schweizerhaus nach seinen landschaftlichen Formen und seiner geschichtlichen Entwicklung, Aarau 1914, volume 8.</p> <p>Fig. 2: Untitled, in: Folder AG54.198, Jakob Hunziker Nachlass, Staatsarchiv Aargau.</p> <p>Appendix 1: Bedachung, in: Folder AG54.198, Jakob Hunziker Nachlass, Staatsarchiv Aargau.</p> <p>Appendix 2: Untitled, in: Folder AG54.198, Jakob Hunziker Nachlass, Staatsarchiv Aargau.</p> <p>Appendix 3: Untitled, in: Folder AG54.198, Jakob Hunziker Nachlass, Staatsarchiv Aargau.</p>
Possible but Rare: Safe and Just Satisfaction of National Human Needs in Terms of Ecosystem Services - Supplemental Data
<p>This supplemental datasheet provides the country-level data used for calculation in the manuscript "Possible but Rare: Safe and Just Satisfaction of National Human Needs in Terms of Ecosystem Services." For a summary of the results and insights, check the main text. Please check the supplemental information to follow the detailed calculations using this data. </p>
Data supplement to "Overview of the Demonstration and Science Experiments (DSX) mission"
<p>Additional data supporting "Overview of the Demonstration and Science Experiments (DSX) mission", manuscript accepted to Journal of Geophysical Research.</p>
Supplemental package of a study on the use of qualitative surveys in software engineering researchers
<p>This package contains the list of analyzed papers in a meta-study on the use of qualitative surveys in software engineering research. It contains all the files obtained in queries to scientific databases, and the list of analyzed papers containing how they were classified according to the aspects analyzed.</p>
Supplemental data for: Endophyte genomes support greater metabolic gene cluster diversity compared with non-endophytes in Trichoderma
<p><em>Trichoderma</em> is a cosmopolitan genus with diverse lifestyles and nutritional modes, including mycotrophy, saprophytism, and endophytism. Previous research has reported greater metabolic gene repertoires in endophytic fungal species compared to closely-related non-endophytes. However, the extent of this ecological trend and its underlying mechanisms are unclear. Some endophytic fungi may also be mycotrophs and have one or more mycoparasitism mechanisms. Mycotrophic endophytes are prominent in certain genera like <em>Trichoderma</em>, therefore, the mechanisms that enable these fungi to colonize both living plants and fungi may be the result of expanded metabolic gene repertoires. Our objective was to determine what, if any, genomic features are overrepresented in endophytic fungi genomes in order to undercover the genomic underpinning of the fungal endophytic lifestyle. Here we compared metabolic gene cluster and mycoparasitism gene diversity across a dataset of thirty-eight <em>Trichoderma</em> genomes representing the full breadth of environmental <em>Trichoderma</em>'s diverse lifestyles and nutritional modes. We generated four new <em>Trichoderma endophyticum</em> genomes to improve the sampling of endophytic isolates from this genus. As predicted, endophytic <em>Trichoderma</em> genomes contained, on average, more total biosynthetic and degradative gene clusters than non-endophytic isolates, suggesting that the ability to create/modify a diversity of metabolites potential is beneficial or necessary to the endophytic fungi. Still, once the phylogenetic signal was taken into consideration, no particular class of metabolic gene cluster was independently associated with the <em>Trichoderma</em> endophytic lifestyle. Several mycoparasitism genes, but no chitinase genes, were associated with endophytic <em>Trichoderma</em> genomes. Most genomic differences between <em>Trichoderma</em> lifestyles and nutritional modes are difficult to disentangle from phylogenetic divergences among species, suggesting that <em>Trichoderma</em> genomes may be particularly well-equipped for lifestyle plasticity. We also consider the role of endophytism in diversifying secondary metabolism after identifying the horizontal transfer of the ergot alkaloid gene cluster to <em>Trichoderma</em>.</p>
Data Supplement for "Wettability Gradient-Driven Droplets with an Applied External Force"
<p>Data set and python code to recreate the figures of "Wettability Gradient-Driven Droplets with an Applied External Force".</p>
Gcoupler supplement data
<p><strong>RNA-sequencing analysis to gain an unbiased view of the mode of action of metabolites in attenuating Ste2 (GPCR)-mediated pheromone-induced cell death in yeast </strong></p>
Data from: Supplementation of seasonal natural resources with year-round anthropogenic resources by coyotes in natural fragments within a high-density urban area
<p>Coyotes (<em>Canis latrans</em>) in urban landscapes provide important food web functions and ecological services but can also trigger human-wildlife conflict when their diet includes anthropogenic resources or domestic pets. As adaptable omnivores, coyotes adjust their diet to their environment, routinely switching among food items to accommodate spatial and seasonal differences in availability. To evaluate coyotes' potential impacts within the food web of urban Long Beach, California where human-wildlife conflict involving coyotes may occur, we analyzed 115 scat samples collected once every two weeks from two open space fragments inside the urban matrix. We hypothesized that differences in scat composition would correlate with seasonal and site differences, with greater use of anthropogenic resources during the dry season supplementing lower prey availability, and greater consumption of wild mammal prey during the wet season when rabbits and small mammals reproduce. We found coyote diet was predominately composed of natural prey and vegetation year-round. Mammals made up more of the coyote diet in the wet season than the dry, while arthropods and vegetation occurred more in dry season scats. Coyotes relied on rabbits as their main prey year-round across all sites. Domestic cats (<em>Felis catus</em>) were the third most common individual prey species found in coyote scats; we did not find evidence of domestic dog (<em>Canis lupus familiaris</em>) consumption. The overall frequency of mammalian remains did not differ across sites but did differ across sites for other prey types. While there is a potential for human-wildlife conflict in coyote's consumption of feral or domestic cats, coyotes may also be providing an ecological service by reducing cats in natural habitat fragments.</p>
Data and Supplemental Materials for "Unraveling the Geologic History of Miranda's Inverness Corona"
<p>This set of materials contains:</p> <p>(1) Topographic Profiles 1-8 (or A-H) with associated codes for FFT analysis</p> <p>(2) Modulated Transfer Function (MTF) filter applied to Voyager 2 images for processing</p> <p>(3) ArcPro Map Package containing the geologic map of Inverness Corona and basemap images</p> <p> </p>
ClinPrior supplemental files
<p>A vcf file with 66,800 SNVs or small INDELs pathogenic variants present in 3,356 different disease-associated genes obtained from the ClinVar database (December 2019); and a txt file with the <span>439,379 HPO-geneID associations used in ClinPrior gene-prioritization tool obtained from OMIM, Orphanet and DisGeNET databases</span>.</p>
Artifact supplement for 'Search and Explore: Symbiotic Policy Synthesis in POMDPs'
<p>Artifact supplement for 'Search and Explore: Symbiotic Policy Synthesis in POMDPs' (CAV 2023).<br> <br> This repository includes:<br> - the Docker image containing the software used in the experiments along with the investigated benchmarks and original log files<br> - a guide for replicating the experiments presented in the publication<br> - two versions of the paper: the initial submission and the final version with the revised experiments</p>
Online supplement to manuscript: "Ability of ChatGPT to generate competent radiology reports for distal radius fracture by use of RSNA template items and integrated AO classifier." Current problems in diagnostic radiology (2023).
<p>Online supplement to manuscript: </p> <p>Bosbach, Wolfram A., Jan F. Senge, Bence Nemeth, Siti H. Omar, Milena Mitrakovic, Claus Beisbart, András Horváth, Johannes Heverhagen, and Keivan Daneshvar. "Ability of ChatGPT to generate competent radiology reports for distal radius fracture by use of RSNA template items and integrated AO classifier." <em>Current problems in diagnostic radiology</em> (2023). <a href="https://doi.org/10.1067/j.cpradiol.2023.04.001">doi.org/10.1067/j.cpradiol.2023.04.001</a></p>
Supplemental Figures for Hageman and Vinn, 2023
<p>Supplemental Figures 1 and 2 for Hageman and Vinn, 2023</p>
Dataset supplementing " X. Zhang, B. Ojha, H. Bichlmaier, I. Hartmann and H. Kohler; Extensive Gaseous Emissions Reduction of Firewood-Fueled Low Power Fireplaces by a Gas Sensor-Based Advanced Combustion Airflow Control System and Catalytic Post-Oxidation, Sensors, 2023"
<p>Dataset supplementing " X. Zhang, B. Ojha, H. Bichlmaier, I. Hartmann and H. Kohler; Extensive Gaseous Emissions Reduction of Firewood-Fueled Low Power Fireplaces by a Gas Sensor-Based Advanced Combustion Airflow Control System and Catalytic Post-Oxidation, Sensors, 2023"</p>
Supporting data and analysis for," A spatially anchored transcriptomic atlas of the human kidney papilla identifies significant immune injury in patients with stone disease", Supplemental 3DTC figures
<p>This deposit contains the supporting records of analysis for 3D cytometry presented in, " A spatially anchored transcriptomic atlas of the human kidney papilla identifies significant immune injury in patients with stone disease". doi: https://doi.org/10.1101/2022.06.22.497218 found in supplemental figures.</p> <p>Contents:</p> <p>1) a collection of .zip files contains the 3D tissue cytometry files for tissue analyzed in the manuscript doi: https://doi.org/10.1101/2022.06.22.497218. This collection includes the individual analyses by figures in the supplemental figure data for 3D tissue cytometry. The main figure data is found at: 10.5281/zenodo.7653239 and 10.5281/zenodo.7900973.</p> <p>2) a collection of zip files containing the RNAScope image files shown in: Figures S1,S4 and S5. The main RNAScope figure data is found at: 10.5281/zenodo.7653239</p> <p>Please address any concerns or questions to the authors listed in the deposit or manuscript, doi: https://doi.org/10.1101/2022.06.22.497218</p>
Supplemental Files to "Mining biodiversity databases establishes a global baseline of cosmopolitan Insecta mOTUs: a case study on Platygastroidea (Hymenoptera) with consequences for biological control programs"
<p>These are supplemental files to the manuscript, "Mining biodiversity databases establishes a global baseline of cosmopolitan Insecta mOTUs: a case study on Platygastroidea (Hymenoptera) with consequences for biological control programs". Supplements contain excel spreadsheets, DNA alignments, Newick tree files, FigTree files, and csv files.</p>
Supplemental Data File for Resetting Archaeological Interpretations of Pre-Contact Indigenous Agriculture: Maize Isotopic Evidence from Three Ancestral Mohawk Iroquoian Villages
<p>Supplemental data tables for the paper "Resetting Archaeological Interpretations of Pre-Contact Indigenous Agriculture: Maize Isotopic Evidence from Three Ancestral Mohawk Iroquoian Villages" revised manuscript submitted for peer review.</p>
Supplemental data for "Investigating the Impact of Irrigation on Malaria Vector Larval Habitats and Transmission using a Hydrology-based Model"
<p>Supplemental data for "Investigating the Impact of Irrigation on Malaria Vector Larval Habitats and Transmission using a Hydrology-based Model"</p>
Supplemental data for: Visualization of rank-citation curves for fast detection of possible manipulations with the h-index of the university
<p>This dataset consists of papers of universities in the top 30 Scopus Ranking of Ukrainian Universities (May 2023). The data was obtained from Scopus using the search query "AF-ID (“university name”) AND PUBYEAR < 2023 AND PUBYEAR > 2002". Rank-citation curves were also generated for the publications of each university. In this analysis, the rank of publications was plotted along the horizontal axis, while the corresponding citation counts were depicted on the left axis. All types of documents were included in the dataset.</p>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.