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7,370 results for “supplementation”
Supplemental Figure S1
<p><strong>Figure S1.</strong> <strong>Alignment of the IGH locus in the genome assembly of SHR-A3 (SHRSP_BbbUtx) with that of SHR-B2 (SHR_Utx).</strong></p> <p>The alignment was produced from recently deposited whole genome assemblies from the SHR-A3 and SHR-B2 lines. These assemblies used long read sequencing and scaffolding methods that are able to capture structural genetic variation such as is present in IGH The illustration was generated by the NIH/NCBI Comparative Genome Viewer tool (https://www.ncbi.nlm.nih.gov/genome/cgv/). Syntenic regions are shaded. Unshaded regions indicate lack of synteny and can include regions of structural duplication.</p>
Figure 1 in Checklist of the water mites (Acari, Hydrachnidia) of Iran: Second supplement and description of one new species
Figure 1. Map of Provinces of Iran.
Supplemental datasets for Chapter 2 of Thesis
<p>Dataset S01. Mutants with significant fitness differences identified from randomization tests, grouped according to function, metabolism, and direction of fitness differences.</p> <p>Dataset S02. Normalized transposon insertions reads that are curated to the central 90% of coding regions.</p> <p>Dataset S03. Mean relative fitness (W) of mutants from four biological replicates. P-values were calculated for 10000 permutations of randomization tests, and were adjusted using a Benjamini-Hochberg correction for multiple comparisons.</p>
Contents of Supplemental Table S15 of the gradient analysis of Mesotaenium endlicherianum
<p>Contents of the large Supplemental Table S15 of the study "Environmental gradients reveal stress hubs predating plant terrestrialization"</p>
Data set supplementing "Characteristics of Users and Nonusers of Symptom Checkers in Germany: Cross-Sectional Survey Study"
<p>This is the data set used to conduct the analyses in the article published by the Journal of Medical Internet Research under the title "Characteristics of Users and Nonusers of Symptom Checkers in Germany: Cross-Sectional Survey Study" (<a href="https://doi.org/10.2196/46231">https://doi.org/10.2196/46231</a>)</p> <p>This data set contains information collected of 1,084 respondents about their awareness, use, and usefulness of symptom checkers and several individual characteristics. </p>
Supplemental data for: Current ethics policies in 36 preprint servers
<p>Preprints, which are non–peer-reviewed articles, offer a rapid dissemination of information, and have gained traction in academic publishing, often serving as the publishing precursors of peer-reviewed journals. Given that many peer-reviewed journals, with often strict ethics policies, allow the prior publication of papers as preprints, we were interested in appreciating the ethics policies in place in preprint servers. We selected 36 preprint servers from the ASAPbio list to base our assessment. We found that that only 8% of analyzed preprint servers contained a dedicated section on the server's ethics policy. As documents that purportedly transmit scientific information, including data-based evidence, we believe that there is a need to fortify the stringency of ethics policies in preprint servers, even standardize them across ASAPbio-listed preprint servers.</p>
Supplemental Datasets for 'Multiplexed effector screening for recognition by endogenous resistance genes using positive defense reporters in wheat protoplasts'
<p>Supplemental Datasets:</p><p><strong>Number </strong></p><p><strong>File name </strong></p><p><strong>Description </strong></p><p>S1 </p><p>S1_Figure1_Data.csv </p><p>Luminescence data for Figure 1, protoplast time course experiment </p><p>S2 </p><p>S2_RNAseqSampleTable.csv </p><p>List of samples and treatment groups for RNAseq experiment </p><p>S3 </p><p>S3_LFC_1_genes.xlsx </p><p>Lists of Gabo/GaboSr50, Fielder and all cultivar genes upregulated by log fold threshold of 1 </p><p>S4 </p><p>S4_GOTerms_Table.xlsx </p><p>GO terms analysis Query tables and g:profiler results tables </p><p>S5 </p><p>S5_LFC2_genes.xlsx </p><p>Lists of Gabo/GaboSr50, Fielder and all cultivar genes upregulated by log fold threshold of 2 </p><p> </p><p>S6 </p><p>S6_Primers.xlsx </p><p>List of primers used </p><p>S7 </p><p>S7_PlasmidList.xlsx </p><p>List of plasmids used </p><p>S8 </p><p>S8_Figures3-5Data.xlsx </p><p>Luminescence data used for generating Figures 3 - 7</p><p>S9</p><p> </p><p>S9_Figures3-7Stat.xlsx</p><p> </p><p>Stats output for Figures 3 - 7</p><p> </p><p>S10</p><p> </p><p>S10_SuppFiguresData.xlsx</p><p> </p><p>Data for Supplementary Figures S1 and S2</p><p> </p>
Supplemental Figure S1
<p>Cell cycle arrest analysis from Flow Jo software. Briefly, A549 cells were treated with FWGP (20 ug/mL) and incubated for 24 and 48 hours. Cells were fixed with ethanol and stained with propidium iodide before acquisition via BD Fortessa flow cytometry. Watson Pragmatic model was used to determine cell cycle percentages. </p>
Supplemental networks of cowords of the paper Measuring the impact of Big Data in the scientific research in Agriculture and allied fields
<p>Supplemental networks of cowords of the paper Measuring the impact of Big Data in the scientific research in Agriculture and allied fields.</p>
Data from: Silicon supplementation and jasmonate activation synergistically increase phenolic defences against a legume herbivore
<p>The accumulation of silicon (Si) is widely reported to have anti-herbivore defensive properties in grasses. There is emerging, but fragmentary, evidence that Si could play a similar role in legumes. Here, we sought to understand the effects of Si supplementation on anti-herbivore defensive properties in lucerne (<em>Medicago sativa</em>), especially in relation to other potential defences (i.e. phenolics) and the phytohormone that regulates anti-herbivore defences, jasmonic acid or jasmonate (JA), which is also linked to Si accumulation. We determined how growth, root nodulation and chemistry (carbon, nitrogen and phenolic concentrations) of four genotypes of lucerne responded to Si supplementation, with and without the application of JA, and we used feeding assays to determine the subsequent effects on the feeding success of adult Sitona discoideus weevils. Si supplementation increased plant mass and root nodulation of <em>M. sativa</em> by 61% and 227%, respectively, and reduced relative consumption (RC) and frass production by S. discoideus by 38% and 30%, respectively. Si supplementation had no effect on foliar nitrogen concentrations, most likely due to the dilution effects of increased plant growth and foliar carbon. Phenolic concentrations were negatively correlated with leaf RC; RC also decreased by 34% when JA was applied to plants. When Si was combined with JA application, phenolics were significantly enhanced, demonstrating the potential to stimulate multiple anti-herbivore properties in M. sativa. The novel findings suggest that Si accumulation may play a more important role in legume resistance to herbivorous animals than previously thought. The ubiquity of soil Si and its emerging functional role in plant biology, including plant–animal interactions, suggest that these patterns could be common amongst legumes.</p>
Supplement to: Early Cretaceous climate for the southern Tethyan Ocean: insights from the geochemical and paleoecological analyses of extinct cephalopods
<p>One file (excel) containing XRPD results and Table S1-S6 with details of the clumped isotope, stable carbon isotope, and trace elements analyses that refers to the manuscript.</p>
Supplement to: Early Cretaceous climate for the southern Tethyan Ocean: insights from the geochemical and paleoecological analyses of extinct cephalopods
<p>One file (excel) containing XRPD results and Table S1-S6 with details of the clumped isotope, stable carbon isotope, and trace elements analyses that refers to the manuscript.</p>
Supplemental Material: Computational Experiments in Computer Science Research: A literature survey
<p>This laboratory package contains supplemental material from the study: "Supplemental Material: Computational Experiments in Computer Science Research: A literature survey". The supplementary material contains:<br> 1. The list of the 26 primary studies.<br> 2. The .xlsx file of the dataset used to analyze the RQ.<br> 3. The list of figures published in the scientific article.</p>
Supplemental Material to Article "Quantification of process-induced effects on fatigue life of short-glass-fiber-filled adhesive used in wind turbine rotor blades"
<p>This set supplements the figure data to the article "Quantification of process-induced effects on fatigue life of short-glass-fiber-filled adhesive used in wind turbine rotor blades", DOI: xxx</p>
Supplemental material for: Multiple routes to color convergence in a radiation of Neotropical poison frogs
<p>Convergent evolution is defined as the independent evolution of similar phenotypes in different lineages. Its existence underscores the importance of external selection pressures in evolutionary history, revealing how functionally similar adaptations can evolve in response to persistent ecological challenges through a diversity of evolutionary routes. However, many examples of convergence, particularly among closely related species, involve parallel changes in the same genes or developmental pathways, raising the possibility that homology at deeper mechanistic levels is an important facilitator of phenotypic convergence. Using the genus <em>Ranitomeya</em>, a young, color-diverse radiation of Neotropical poison frogs, we set out to (1) provide a phylogenetic framework for this remarkable group, (2) leverage this framework to determine if color phenotypes are convergent, and (3) to characterize the underlying coloration mechanisms to test whether color convergence occurred through the same or different physical mechanisms. We generated a phylogeny for <em>Ranitomeya</em> using ultraconserved elements and investigated the physical mechanisms underlying bright coloration, focusing on skin pigments. Using phylogenetic comparative methods, we identified several instances of color convergence, involving several gains and losses of carotenoid and pterin pigments. We also found a compelling example of nonparallel convergence, where, in one lineage, red coloration evolved through the red pterin pigment drosopterin, and in another lineage, through red ketocarotenoids. Additionally, in another lineage, "reddish" coloration evolved predominantly through structural color mechanisms. Our study demonstrates that, even within a radiation of closely related species, convergent evolution can occur through both parallel and nonparallel mechanisms, challenging the assumption that similar phenotypes among close relatives evolve through the same mechanisms.</p>
Reproductive output and telomere dynamics following calcium supplementation in wild Tree Swallows (Tachycineta bicolor)
<p>This data was the result of an experiment investigating whether biologically relevant differences in reproductive investment influence fitness in a wild bird species. We employed calcium supplementation to experimentally modify reproductive output in Tree Swallow mothers and offspring and we used telomere dynamics during the breeding season as a proxy for fitness. <span>To confirm that calcium supplementation positively impacts reproductive parameters at our study site, we initiated a 4-year trial of calcium supplementation with our Tree Swallow study population. In the following two breeding seasons, we used calcium supplementation to experimentally alter reproductive output and measured telomere length in mothers immediately before egg-laying and shortly before fledging to determine the direct relationship between reproductive investment and telomere shortening in this species. </span>Our study includes one hundred eighty-eight nests initiated and monitored over six breeding seasons. </p>
ggCaller Supplemental Code
<p>Datasets, analysis scripts and source code used in the ggCaller manuscript.</p>
Split Inalienable Coding in Linguistic Wallacea: Typology, origins, spread – supplemental materials
<p>Supplemental materials for the paper: 'Split Inalienable Coding in Linguistic Wallacea: Typology, origins, spread'.</p>
Supplemental materials for studying GPU programming with Stack Overflow posts
<p>It includes the data used in our study of GPU programming and the complete results obtained from the study.</p>
Supplemental data for "Transcriptomic Profiling of the Bovine Endosalpinx and Endometrium to Identify Putative Embryokines"
<p>Supplemental data for paper describing expression of genes encoding for cell-signaling ligands in the oviduct and endometrium of cows. </p>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.