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4,144 results for “ITS barcode”
FIGURES 26–30 in Revision of the Nearctic species of Gimnomera Rondani (Diptera: Scathophagidae) with morphological phylogeny and DNA barcodes
FIGURES 26–30. Morphological features of Gimnomera. 26–27. View of anterior margin of postpronotum with dark spine-like setae or with light coloured setulae: 26. G. cerea (Coquillett); 27. G. terrywheeleri sp. nov.; 28. G. tibialis (Malloch), vein R1 with row of setulae; 29–30. Male sternite 5: 29. G. subvittata (Malloch); 30. G. vockerothi sp. nov..
FIGURES 21–22 in Revision of the Nearctic species of Gimnomera Rondani (Diptera: Scathophagidae) with morphological phylogeny and DNA barcodes
FIGURES 21–22. Gimnomera vockerothi sp. nov., female. 21. Colour patterns on the occiput; 22. Colour pattern on scutellum.
FIGURE 3 in Integrative taxonomy of some Iranian peregrine earthworm species using morphology and barcoding (Annelida: Megadrili)
FIGURE 3. ML tree of the studied species based on the 16S sequences. Nodes with Bayesian posterior probability and maximum likelihood bootstrap values. The red lines indicate the Iranian clades.
FIGURE 2 in Integrative taxonomy of some Iranian peregrine earthworm species using morphology and barcoding (Annelida: Megadrili)
FIGURE 2. ML tree of the studied species based on the COI sequences. Nodes with Bayesian posterior probability and maximum likelihood bootstrap values. The red lines indicate the Iranian clades.
Fig. 2 in Ten species in one: DNA barcoding reveals cryptic species in the neotropical skipper butterfly Astraptes fulgerator
Fig. 2. Last-instar caterpillars of 10 species in the A. fulgerator complex from the ACG. Interim names reflect the primary larval food plant and, in some cases, a color character of the adult.
Fig. 3 in Ten species in one: DNA barcoding reveals cryptic species in the neotropical skipper butterfly Astraptes fulgerator
Fig. 3. NJ tree based on Kimura-2-Parameter distances for COI DNA sequences from 466 individuals of the A. fulgerator complex from the ACG. Numbers in parentheses indicate the total sample size for each interim taxon, rectangles caricature caterpillar color patterns, and black backgrounds indicate groups of 10 conspecifics with identical sequences.
Fig. 1. Newly eclosed female A in Ten species in one: DNA barcoding reveals cryptic species in the neotropical skipper butterfly Astraptes fulgerator
Fig. 1. Newly eclosed female A. fulgerator (species LOHAMP, voucher code 02-SRNP-9770) from the ACG.
Genetic barcoding systematically comparing haploinsufficiency of key genes in del(5q) MDS reveals a central role for CSNK1A1 in clonal expansion
<p>R object with pre-processed single cell data of the manuscript "<strong>Genetic barcoding systematically comparing haploinsufficiency of key genes in del(5q) MDS reveals a central role for </strong><em>CSNK1A1</em><strong> in clonal expansion"</strong></p>
FIGURE 3 in First record of the West Nile virus bridge vector Culex modestus Ficalbi (Diptera Culicidae) in Belgium, validated by DNA barcoding
FIGURE 3. NJ tree based on COI sequences downloaded from BOLD, including Culex species recorded from Belgium (Boukraa et al. 2015) and sequences of Cx. modestus (Table 1). Bootstrap values are indicated above the branches. The blue square gives a zoom view of the un-collapsed tree.
FIGURE 2 in First record of the West Nile virus bridge vector Culex modestus Ficalbi (Diptera Culicidae) in Belgium, validated by DNA barcoding
FIGURE 2. The small vernal pond vegetated with common cattail (Typha latifolia) where the Cx. modestus larva was collected.
FIGURE 1 in First record of the West Nile virus bridge vector Culex modestus Ficalbi (Diptera Culicidae) in Belgium, validated by DNA barcoding
FIGURE 1. (A) Posterior part of the mounted Cx. modestus larva. Zoom on the diagnostic characteristic of the siphon, showing disarrayed insertion points of the ventral siphonal setae. (B) Posterior part of a mounted Cx. pipiens larva.
Data from: Plant DNA barcodes and the influence of gene flow
Success of species assignment using DNA barcodes has been shown to vary among plant lineages due to a wide range of different factors. In this study, we confirm the theoretical prediction that gene flow influences species assignment with simulations and a literature survey. We show that the genome experiencing the highest gene flow is, in the majority of the cases, the best suited for species delimitation. Our results clearly suggest that, for most angiosperm groups, plastid markers will not be the most appropriate for use as DNA barcodes. We therefore advocate shifting the focus from plastid to nuclear markers to achieve an overall higher success using DNA barcodes.
FIGURE 10 in DNA barcodes and morphology reveal two new species of Monodiamesa Kieffer (Diptera: Chironomidae: Prodiamesinae) in Tibetan Plateau
FIGURE 10. Monodiamesa bathyphila (Japanese population). Photos: (A–B) hypopygium. (Prodiamesa chuzenigra, from NMNS, No: 052:001); (C–D) hypopygium. (illustrated by Masaru Yamamoto). Scale bar: A–D, 100 μm.
FIGURE 9 in DNA barcodes and morphology reveal two new species of Monodiamesa Kieffer (Diptera: Chironomidae: Prodiamesinae) in Tibetan Plateau
FIGURE 9. Monodiamesa tibetica (Holotype, from Nankai University). Photos: (A–B) hypopygium, dorsal view, ventral view; (C) superior volsella; (D) median volsella; (E) basal median lobe. Scale bar: A–B, 50 μm; C–E, 25 μm.
FIGURE 7 in DNA barcodes and morphology reveal two new species of Monodiamesa Kieffer (Diptera: Chironomidae: Prodiamesinae) in Tibetan Plateau
FIGURE 7. Monodiamesa bonalpicola sp. n., female. Photos: (A) hypopygium, ventral view. Illustration. (B) antenna; (C) S VIII; (D) hypopygium, ventral view. Scale bar: A, 50μm; B–E, 100 μm.
FIGURE 8 in DNA barcodes and morphology reveal two new species of Monodiamesa Kieffer (Diptera: Chironomidae: Prodiamesinae) in Tibetan Plateau
FIGURE 8. Monodiamesa bonalpicola sp. n., immatures. Photos: (A–B) pharate, P/M, lateral view, dorsal view; (C) pupa, pedes spurii B; (D) pupa, segment VIII; (E) larva, procercus. (F) larva, head capsule, ventral view. Illustration: (G) larva, mentum. Scale bar: A–B, 50 μm; C–D, 20μm; E–G, 50 μm.
FIGURE 6 in DNA barcodes and morphology reveal two new species of Monodiamesa Kieffer (Diptera: Chironomidae: Prodiamesinae) in Tibetan Plateau
FIGURE 6. Monodiamesa bonalpicola sp. n., male. Photos: (A) hypopygium; (B) basal median lobe; (C) hind tibial comb. Illustration: (D) hypopygium, dorsal view; (E) hypopygium, ventral view. Scale bar: A–E, 50 μm.
FIGURE 2 in DNA barcodes and morphology reveal two new species of Monodiamesa Kieffer (Diptera: Chironomidae: Prodiamesinae) in Tibetan Plateau
FIGURE 2. Neighbor-joining tree based on the 146 COI barcodes of Prodiamesinae. Only bootstrap support (1000 replicates)> 70% are shown on the branches.
FIGURE 4 in DNA barcodes and morphology reveal two new species of Monodiamesa Kieffer (Diptera: Chironomidae: Prodiamesinae) in Tibetan Plateau
FIGURE 4. Monodiamesa secunditibetica sp. n., female. Photos: (A) hypopygium, ventral view. Illustration: (B) antenna; (C) S VIII; (D) dorsomesal lobe, apodeme and ventrolateral lobe; (E) hypopygium, ventral view. Scale bar: A–B, 100 μm; C–E, 50 μm.
FIGURE 3 in DNA barcodes and morphology reveal two new species of Monodiamesa Kieffer (Diptera: Chironomidae: Prodiamesinae) in Tibetan Plateau
FIGURE 3. Monodiamesa secunditibetica sp. n., male. Photos: (A) hypopygium; (B) clypeus; (C) MVo; (D) basal median lobe. Illustration: (E) hypopygium, dorsal view; (F) hypopygium, ventral view. Scale bar: A–B, 100 μm; C–F, 50 μm.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.