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Sensitivity of fire weather indices, fuel sticks and satellite observations to fuel moisture content in Central European forests - Data
<p>This data repository contains datasets for destructively measured fuels of different types (FMC_insitu), meteorological data including 10-hour fuel stick measurements (FWS_30min) and calculated fire weather index components (FWS_FWI_24h) for four different sites in the Tharandt forest and Saxon Switzerland National Park in the Free State of Saxony (Germany) during the years 2022 (only DE-Tha) and 2023 (all four sites).</p> <p>The provided folders contain .csv files for each study site. Meteorological data in 30min for DE-Tha can be derived from the ICOS data portal (https://data.icos-cp.eu/portal/). For the remaining three sites (DE-BLB, DE-BWB, DE-SHW), past and recent data can be viewed via EMS Brno (e.g., http://www.emsbrno.cz/p.axd/en/Beech__Landberg.TU__DRESDEN.html). Upon request, the authors can share the data. </p> <p><strong>FMC_insitu</strong>: Destructively sampled fuel moisture content of different fuel types.</p> <p><strong>FWS_30min</strong>: Original measurements from the fire weather stations in 30 min time steps</p> <p><strong>FWS_FWI_24h</strong>: Measurements from fire weather stations in 24h time steps and the calculated fire weather index and its components. As requested for calculation of the FWI, meteorological variables are used at 13:00 (UTC), while PREC and PBC are the 24h sum prior to 13:00. </p> <p><strong>readme.txt</strong>: Description of repository content and the variables provided within the .csv files.</p> <p><strong>stations.csv</strong>: Contains the coordinates and a short description of the study sites. </p>
Deliverable 2.2: Biodiversity indicator database for focus regions (phylogenetic files)
<p>The files provided in this repository complements the previous version of the Deliverable 2.2: Biodiversity indicator database for focus regions (same DOI) by including:</p> <ul> <li>Phylodiversity maps</li> <li>Organized database in Excel</li> <li>Code for the results .txt</li> </ul>
Fig. 5. Maximum Likelihood tree for genus Thyridium with RPB2 dataset. Node numbers indicate bootstrap value above 70 in First report of seven unrecorded bambusicolous fungi in Korea
Fig. 5. Maximum Likelihood tree for genus Thyridium with RPB2 dataset. Node numbers indicate bootstrap value above 70%. Blue colored names indicate the strains isolated in this study. Type strains are indicated by "T".
Fig. 3. Maximum Likelihood tree for genus Macroconia with ITS dataset. Node numbers indicate bootstrap value above 70 in First report of seven unrecorded bambusicolous fungi in Korea
Fig. 3. Maximum Likelihood tree for genus Macroconia with ITS dataset. Node numbers indicate bootstrap value above 70%. Blue colored names indicate the strains isolated in this study. Type strains are indicated by "T".
Fig. 2 in Saproxylic weevils and edaphic beetles as indicators of environmental quality of relict forests in Piedmont lowlands (Coleoptera)
Fig. 2 – Map of Parco della Partecipanza, completely surrounded by agroecosystems. Map data: Google Earth, Maxar Technologies, used according to Google Earth Terms of Service.
Fig. 1 in Assessment of Odonate assemblages in the Agro Pontino (Latina, Central Italy) using two biotic indices (Insecta: Odonata)
Fig. 1 – Geographical location of the study area (Lazio, central Italy). On the right: geographical location within Italy
Fig. 1 in Saproxylic weevils and edaphic beetles as indicators of environmental quality of relict forests in Piedmont lowlands (Coleoptera)
Fig. 1 – The collecting sites. Map data: Google Earth, Maxar Technologies, used according to Google Earth Terms of Service.
Fig. 5 in Saproxylic weevils and edaphic beetles as indicators of environmental quality of relict forests in Piedmont lowlands (Coleoptera)
Fig. 5 – Some of the weevils collected in the research. a, Kyklioacalles navieresi (Boheman, 1837); b, Kyklioacalles aubei (Boheman, 1837); c, Acalles echinatus (Germar, 1824); d, Echinodera hypocrita (Boheman, 1837). From Stüben (2014-2020), used with permission.
Fig. 3. Tallies within each Tennessee county indicate the total buprestid species recorded from specimen label records spanning 1934 in Seasonal flight activity and distribution of metallic woodboring beetles (Coleoptera: Buprestidae) collected in North Carolina and Tennessee
Fig. 3. Tallies within each Tennessee county indicate the total buprestid species recorded from specimen label records spanning 1934 to 2013. When presented across Tennessee, species yields indicate areas of greatest and least collection activity and highlight regions of future collection interest. This figure is displayed in color online at http://purl.fcla.edu/fcla/entomologist/browse
Fig. 2. Tallies within each North Carolina county indicate the total buprestid species recorded from specimen label records spanning 1901 in Seasonal flight activity and distribution of metallic woodboring beetles (Coleoptera: Buprestidae) collected in North Carolina and Tennessee
Fig. 2. Tallies within each North Carolina county indicate the total buprestid species recorded from specimen label records spanning 1901 to 2013. When presented across North Carolina, species yields indicate areas of greatest and least collection activity and highlight regions of future collection interest. This figure is displayed in color online at http://purl.fcla.edu/fcla/entomologist/browse
Fig. 7 in New skeleton from the early Oligocene of Germany indicates a stem-group position of diomedeoidid birds
Fig. 7. Relationships between crown group Procellariiformes and the Diomedeoididae. The two nodes are characterized by the characters: 1, cotyla scapularis of coracoid shallow; 2, mandibular symphysis short; processus supracondylaris dorsalis large; legs short (note that the Hydrobatinae are intermediate in the last two characters mentioned).
Supplement code and data for "A global multi-indicator assessment of the environmental impact of livestock products"
<p>This data and code supplements the publication "A global multi-indicator assessment of the environmental impact of livestock products" by Giorgio A. Bidoglio, Florian Schwarzmueller, Thomas Kastner available here: https://doi.org/10.1016/j.gloenvcha.2024.102853<br><br></p> <p>Version 1.1 add the code to the visualization tool available online at https://livestockimpactassessment.shinyapps.io/multi-indicator_impact_assessment_of_livestock_products/</p>
◂Fig. 5 Gametogenesis in male and female Veneriserva pygoclava. A–D Semi-thin histological sections of female Veneriserva pygoclava, stained with toluidine blue. A Cross-section of a female Veneriserva. B Close-up of large mature oocytes without discernible nurse cells. C Developing oocytes attached to mesenteries (mes), and oogonia proliferating from the ventral side of the dorsal blood vessel (bv). D Details of vitellogenic oocytes and nurse cells. Arrowheads indicate brownstained yolk platelets and yolk bodies. E Live sperm cells captured in a light micrograph. F–G Cross-sections of male Veneriserva. Note the absence of a gut in the cross-sections. Abbreviations—ac acicula, acr acrosome, bv blood vessel, coe coelomic cavity, mes mesentery, nc nurse cell, nn nurse cell nucleus, nu sperm cell nucleus, Oo oocyte, on oocyte nucleus, sp spermatogonia, vnc ventral nerve cord in Hardly Venus's servant-morphological adaptations of Veneriserva to an endoparasitic lifestyle and its phylogenetic position within Dorvilleidae (Annelida)
◂Fig. 5 Gametogenesis in male and female Veneriserva pygoclava. A–D Semi-thin histological sections of female Veneriserva pygoclava, stained with toluidine blue. A Cross-section of a female Veneriserva. B Close-up of large mature oocytes without discernible nurse cells. C Developing oocytes attached to mesenteries (mes), and oogonia proliferating from the ventral side of the dorsal blood vessel (bv). D Details of vitellogenic oocytes and nurse cells. Arrowheads indicate brownstained yolk platelets and yolk bodies. E Live sperm cells captured in a light micrograph. F–G Cross-sections of male Veneriserva. Note the absence of a gut in the cross-sections. Abbreviations—ac acicula, acr acrosome, bv blood vessel, coe coelomic cavity, mes mesentery, nc nurse cell, nn nurse cell nucleus, nu sperm cell nucleus, Oo oocyte, on oocyte nucleus, sp spermatogonia, vnc ventral nerve cord
◂Fig. 4 Gynoecium of C. crenata %yellow frames), C. cf. grandicalyx %blue frames) and C. sinensis %pink frames; A–R light microscopy; TS in horizontal orientation). A Secantial section. B, C TS %note cellular organisation). D Secantial section. E, F TS %note cellular organisation). G Secantial section of young gynoecium showing cellular organisation. H–J TS %note lacking cellular organisation, localisation in K–M). K–M LS at different levels from outside to inside of the same specimen %note strongly stained peripheral tissue; asterisks indicate tissue illustrated in H–J). N TS %note dehiscence lines of the prospective endocarp). O, P TS showing transmission tissue and dorsal bundles at top of style. Q vascularisation at base of gynoecium %note strongly stained peripheral tissue). R Vascularisation at base of flower %LS, longisection; TS, transverse section; db, dorsal bundle; dl, dehiscent line; ep, epidermis; lb, lateral bundle; tt, transmission tissue; ut, peripheral tissue; vb, ventral bundle; vs, ventral slit) in Observations on flower and fruit anatomy in dioecious species of Cordia (Cordiaceae, Boraginales) with evolutionary interpretations
◂Fig. 4 Gynoecium of C. crenata %yellow frames), C. cf. grandicalyx %blue frames) and C. sinensis %pink frames; A–R light microscopy; TS in horizontal orientation). A Secantial section. B, C TS %note cellular organisation). D Secantial section. E, F TS %note cellular organisation). G Secantial section of young gynoecium showing cellular organisation. H–J TS %note lacking cellular organisation, localisation in K–M). K–M LS at different levels from outside to inside of the same specimen %note strongly stained peripheral tissue; asterisks indicate tissue illustrated in H–J). N TS %note dehiscence lines of the prospective endocarp). O, P TS showing transmission tissue and dorsal bundles at top of style. Q vascularisation at base of gynoecium %note strongly stained peripheral tissue). R Vascularisation at base of flower %LS, longisection; TS, transverse section; db, dorsal bundle; dl, dehiscent line; ep, epidermis; lb, lateral bundle; tt, transmission tissue; ut, peripheral tissue; vb, ventral bundle; vs, ventral slit)
◂Fig. 3 Gynoecium of C. crenata %yellow frames), C. cf. grandicalyx %blue frames) and C. sinensis %pink frames; A, B stack shot images; C–K light microscopy; G polarised light; TS in horizontal orientation). A, B Anthetic female flower, calyx and corolla partly removed. B LS of gynoecium. C LS of functionally female flower %note strongly stained peripheral tissue of corolla, anther and gynoecium). D LS of gynoecium. E, F TS of functionally female flower %note strongly stained, peripheral tissue). G TS of functionally female flower %note crystal deposition). H LS of ovule %note stalked embryo sac). J TS of functionally male flower with non-functional ovules. K LS of functionally male flower %style lacking, original position indicated by an asterisk) %LS, longisection; TS, transverse section; a,anther; bs, basal septum; c, calyx; car, carpel; co, corolla; db, dorsal bundles; es, embryo sac; fs, false septum; lb, lateral bundles; o, ovule; stg, stigma; sty, style; t, trichomes; tt, transmission tissue; ut, peripheral, strongly stained tissue; vb, ventral bundles; vs, ventral slit) in Observations on flower and fruit anatomy in dioecious species of Cordia (Cordiaceae, Boraginales) with evolutionary interpretations
◂Fig. 3 Gynoecium of C. crenata %yellow frames), C. cf. grandicalyx %blue frames) and C. sinensis %pink frames; A, B stack shot images; C–K light microscopy; G polarised light; TS in horizontal orientation). A, B Anthetic female flower, calyx and corolla partly removed. B LS of gynoecium. C LS of functionally female flower %note strongly stained peripheral tissue of corolla, anther and gynoecium). D LS of gynoecium. E, F TS of functionally female flower %note strongly stained, peripheral tissue). G TS of functionally female flower %note crystal deposition). H LS of ovule %note stalked embryo sac). J TS of functionally male flower with non-functional ovules. K LS of functionally male flower %style lacking, original position indicated by an asterisk) %LS, longisection; TS, transverse section; a,anther; bs, basal septum; c, calyx; car, carpel; co, corolla; db, dorsal bundles; es, embryo sac; fs, false septum; lb, lateral bundles; o, ovule; stg, stigma; sty, style; t, trichomes; tt, transmission tissue; ut, peripheral, strongly stained tissue; vb, ventral bundles; vs, ventral slit)
◂Fig.15 Scanning electron micrographs (SEM) showing transverse rows of dentition on Dinaride Zospeum and Iberozospeum radulae; (a) Z. pretneri, (NMBE 553290), Gornja Cerovačka pećina, Croatia, transverse rows of teeth on long, slender basal plates (bp), rachidian (r) and lateral teeth (l), arrows indicate medial grooves on mesocones of individual teeth; (b) Z. isselianum, NMBE 553389, Turjeva jama, Slovenia, ibid.; (c) Iberozospeum sp. (RMNH.MOL.234,116), Cueva a Sul, straight transverse rows of small, seemingly bi-cuspid lateral teeth (l) with reduced mesocones on compact basal plates; (d) ibid., close up view of rachidian teeth (r), lateral fang-like teeth (l) and transitional teeth (t); (e) I. vasconicum, (AJC 1848), Cueva Ermita de Sandaili, rachidian teeth (r) flanked by 4-cuspid lateral teeth (l), C. ibazoricum-like in form; (f) Iberozospeum sp. (RMNH. MOL.234108), Cueva la Torcona, lateral teeth showing reduced mesocones (me) flanked by long, fang-like endo- and ectocones (e), rachidian tooth (r) (flipped over in upper righthand corner of image); (g) I. zaldivarae (AJC 1876a), Cueva de Las Paúles, transverse rows of teeth showing varying cusp lengths; (h) ibid., close up view (left to right) of marginal (m) and transitional teeth (t) on short, compact basal plates (bp). — Magnification varies for each perspective, see scale bars; all Figs taken by M. Ruppel, (ret.) Goethe University Frankfurt am Main in Molecular investigation and description of Iberozospeum n. gen., including the description of one new species (Eupulmonata, Ellobioidea, Carychiidae)
◂Fig.15 Scanning electron micrographs (SEM) showing transverse rows of dentition on Dinaride Zospeum and Iberozospeum radulae; (a) Z. pretneri, (NMBE 553290), Gornja Cerovačka pećina, Croatia, transverse rows of teeth on long, slender basal plates (bp), rachidian (r) and lateral teeth (l), arrows indicate medial grooves on mesocones of individual teeth; (b) Z. isselianum, NMBE 553389, Turjeva jama, Slovenia, ibid.; (c) Iberozospeum sp. (RMNH.MOL.234,116), Cueva a Sul, straight transverse rows of small, seemingly bi-cuspid lateral teeth (l) with reduced mesocones on compact basal plates; (d) ibid., close up view of rachidian teeth (r), lateral fang-like teeth (l) and transitional teeth (t); (e) I. vasconicum, (AJC 1848), Cueva Ermita de Sandaili, rachidian teeth (r) flanked by 4-cuspid lateral teeth (l), C. ibazoricum-like in form; (f) Iberozospeum sp. (RMNH. MOL.234108), Cueva la Torcona, lateral teeth showing reduced mesocones (me) flanked by long, fang-like endo- and ectocones (e), rachidian tooth (r) (flipped over in upper righthand corner of image); (g) I. zaldivarae (AJC 1876a), Cueva de Las Paúles, transverse rows of teeth showing varying cusp lengths; (h) ibid., close up view (left to right) of marginal (m) and transitional teeth (t) on short, compact basal plates (bp). — Magnification varies for each perspective, see scale bars; all Figs taken by M. Ruppel, (ret.) Goethe University Frankfurt am Main
◂Fig. 6 A molecular phylogeny of 56 systematically representative Peridiniaceae, including 42 accessions assignable to P. cinctum from various geographic regions. Maximum likelihood tree (– ln = 21,884.93), as inferred from a rRNA nucleotide alignment (1137 parsimony-informative sites) and with strain number information. Numbers on branches are ML bootstrap (above) and Bayesian support values (below) for the clusters (asterisks indicate maximal support values, values under 50 and 0.90, respectively, are not shown). Clades are indicated (CZE Czech Republic, E East, GER Germany, HET Heterocapsaceae, N North, PPE Protoperidiniaceae, POL Poland, rbn ribotype n, S South, SWE Sweden, UKR Ukraine, W West) in Bumps on the back: An unusual morphology in phylogenetically distinct Peridinium aff. cinctum (= Peridinium tuberosum; Peridiniales, Dinophyceae)
◂Fig. 6 A molecular phylogeny of 56 systematically representative Peridiniaceae, including 42 accessions assignable to P. cinctum from various geographic regions. Maximum likelihood tree (– ln = 21,884.93), as inferred from a rRNA nucleotide alignment (1137 parsimony-informative sites) and with strain number information. Numbers on branches are ML bootstrap (above) and Bayesian support values (below) for the clusters (asterisks indicate maximal support values, values under 50 and 0.90, respectively, are not shown). Clades are indicated (CZE Czech Republic, E East, GER Germany, HET Heterocapsaceae, N North, PPE Protoperidiniaceae, POL Poland, rbn ribotype n, S South, SWE Sweden, UKR Ukraine, W West)
◂Fig. 1 Morphology of thecate and coccoid cells, with labelled thecal plates. a–c, i, m Light microscopy, d–h, k–l scanning electron microscopy. a Ventral view of strain GeoM*788; b dorsal view of strain GeoM*793; c apical view of strain GeoK*044; d ventral view of strain GeoK*037; e dorsal view of strain GeoM*788; f apical view of strain GeoK*024, with the dehiscence of epithecal opening indicated by a blue line; g antapical view of strain GeoK*044; h leftlateral view of strain GeoM*866; i motile cell of strain GeoK*037; k–m coccoid cells showing variability in shape and size of strains k GeoM*866, l GeoM*793 and m GeoK*024. Abbreviations: n′: apical plate, n′′: precingular plate, n′′′: postcingular plate, n′′′′: antapical plate, na: anterior intercalary plate, nC: cingular plate, Sa: anterior sulcal plate, Sd: right sulcal plate, Sp: posterior sulcal plate. Ss: left sulcal plate. Scale bar: 10 µm. UA: 15 kV in Morphological and molecular variability of Peridinium volzii Lemmerm. (Peridiniaceae, Dinophyceae) and its relevance for infraspecific taxonomy
◂Fig. 1 Morphology of thecate and coccoid cells, with labelled thecal plates. a–c, i, m Light microscopy, d–h, k–l scanning electron microscopy. a Ventral view of strain GeoM*788; b dorsal view of strain GeoM*793; c apical view of strain GeoK*044; d ventral view of strain GeoK*037; e dorsal view of strain GeoM*788; f apical view of strain GeoK*024, with the dehiscence of epithecal opening indicated by a blue line; g antapical view of strain GeoK*044; h leftlateral view of strain GeoM*866; i motile cell of strain GeoK*037; k–m coccoid cells showing variability in shape and size of strains k GeoM*866, l GeoM*793 and m GeoK*024. Abbreviations: n′: apical plate, n′′: precingular plate, n′′′: postcingular plate, n′′′′: antapical plate, na: anterior intercalary plate, nC: cingular plate, Sa: anterior sulcal plate, Sd: right sulcal plate, Sp: posterior sulcal plate. Ss: left sulcal plate. Scale bar: 10 µm. UA: 15 kV
◂Fig. 4 A molecular tree of 51 systematically representative Peridiniaceae, including all 28 accessions assignable to P. volzii. Maximum Likelihood tree (–ln = 22,017.62), as inferred from a rRNA nucleotide alignment (1,129 parsimony-informative sites) and with strain number information. Numbers on branches are ML bootstrap (above) and Bayesian support values (below) for the clusters (asterisks indicate maximal support values, values under 50 and 0.90, respectively, are not shown). Clades are indicated (abbreviations: HET, Heterocapsaceae; PPE, Protoperidiniaceae) in Morphological and molecular variability of Peridinium volzii Lemmerm. (Peridiniaceae, Dinophyceae) and its relevance for infraspecific taxonomy
◂Fig. 4 A molecular tree of 51 systematically representative Peridiniaceae, including all 28 accessions assignable to P. volzii. Maximum Likelihood tree (–ln = 22,017.62), as inferred from a rRNA nucleotide alignment (1,129 parsimony-informative sites) and with strain number information. Numbers on branches are ML bootstrap (above) and Bayesian support values (below) for the clusters (asterisks indicate maximal support values, values under 50 and 0.90, respectively, are not shown). Clades are indicated (abbreviations: HET, Heterocapsaceae; PPE, Protoperidiniaceae)
Figure 1 in Newly registered tracks of Raccoon dogs (Nyctereutes procyonoides) indicate the presence of resident population in the region of Bolata dere (NE Bulgaria)
Figure 1. Schematic map of Bolata bay. The red dot indicates the position of the footprints of a Raccoon dog found on 16.04.2015. Abbreviations: N. p. tracks – Nyctereutes procyonoides tracks; r.n. - road north, r.s.- road south. Scale bar – 60 m.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.