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779
datasets available to search
ShareScore release 0.9.0
Dataset results
779 results for “CTCF”
T cell-intrinsic cGAS-CTCF regulation maintains regulatory T cell development and function
GEO Series GSE301763. Mus musculus. 30 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other; Expression profiling by high throughput sequencing.
Atypical modes of CTCF binding facilitate tissue-specific and neuronal activity-dependent gene expression states [CTCF_ChIP-seq]
GEO Series GSE235970. Mus musculus. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Atypical modes of CTCF binding facilitate tissue-specific and neuronal activity-dependent gene expression states [SMC1_ChIP-seq]
GEO Series GSE235971. Mus musculus. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
[E-MTAB-223] ChIP-seq for FOXA1, ER and CTCF in breast cancer cell lines
GEO Series GSE25710. Homo sapiens. 53 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide mapping of CTCF binding in asynchronous and mitotic cells
GEO Series GSE102019. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Aire regulates chromatin looping by evicting CTCF from domain boundaries and favoring accumulation of cohesin on super-enhancers [CUT&Tag]
GEO Series GSE180936. Mus musculus. 4 samples. Type: Other.
Affinity-seq of mouse and human ZFY proteins and mouse CTCF
GEO Series GSE111772. Homo sapiens; Mus musculus. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ENCODE: CTCF ChIP-chip of retinoic acid-stimulated HL60 cells at 4 timepoints (NCBIv34)
GEO Series GSE2791. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by genome tiling array.
Interplay between CTCF-binding and CTCF-lacking regulatory elements in generating an architectural stripe at the Igh locus
GEO Series GSE280719. Mus musculus. 16 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
CTCF-mediated cis-regulatory chromatin insulation enforces a central B-cell tolerance checkpoint [Micro-C-TALE]
GEO Series GSE313783. Mus musculus. 4 samples. Type: Other.
Hexavalent chromium disrupts chromatin organization and accessibility to CTCF sites in promoters of differentially expressed genes [MNase-Seq]
GEO Series GSE104565. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Senescent cells cluster CTCF on nuclear speckles to sustain their splicing program [e-CLIP]
GEO Series GSE269857. Homo sapiens. 8 samples. Type: Other.
Dissection of a CTCF topological boundary uncovers principles of enhancer-oncogene regulation
GEO Series GSE241927. Homo sapiens. 65 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
The CTCF paralog CTCFL disrupts cohesin at active promoters. [human]
GEO Series GSE67094. Homo sapiens. 6 samples. Type: Expression profiling by array.
Active enhancers strengthen TAD insulation by bRNA mediated CTCF enrichment at the TAD boundaries
GEO Series GSE180659. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The WNT-dependent gating of MYC requires non-canonical functions of a distal CTCF binding site
GEO Series GSE182556. Homo sapiens. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
CTCF deletion alters the pluripotency and DNA methylation profile of human iPSCs (methylation)
GEO Series GSE247427. Homo sapiens. 3 samples. Type: Methylation profiling by array.
The landscape of H3K9me2 and CTCF in mice GV oocytes
GEO Series GSE182557. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
T cell-intrinsic cGAS-CTCF regulation maintains regulatory T cell development and function [Hi-C]
GEO Series GSE301663. Mus musculus. 8 samples. Type: Other.
3D genome organization by CTCF prevents exTreg differentiation to control autoimmunity peripheral tolerance and immunotherapy outcomes [Hi-C]
GEO Series GSE274543. Mus musculus. 8 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.