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Figure 3 from: Long S, Liu L, Pi Y, Wu Y, Lin Y, Zhang X, Long Q, Kang Y, Kang J, Wijayawardene NN, Wang F, Shen X, Li Q (2021) New contributions to Diatrypaceae from karst areas in China. MycoKeys 83: 1-37. https://doi.org/10.3897/mycokeys.83.68926
Figure 3 Pseudodiatrype hainanensis (GMB0054, holotype) A stromata on host substrate B, C stromata on host D transverse section through ascostroma E vertical section through ascostroma F culture on PDAG section through the ascostroma H ostiolar canal I peridium J–M ascospores N–P asci. Scale bars: 40 μm (G); 10 μm (H–P).
Figure 8 from: Long S, Liu L, Pi Y, Wu Y, Lin Y, Zhang X, Long Q, Kang Y, Kang J, Wijayawardene NN, Wang F, Shen X, Li Q (2021) New contributions to Diatrypaceae from karst areas in China. MycoKeys 83: 1-37. https://doi.org/10.3897/mycokeys.83.68926
Figure 8 Eutypa cerasi (GMB0048, holotype) A stromata on host substrate B, C close-up of stroma D transverse section through ascostroma E vertical section through ascostroma F culture on PDAG section through the ascostroma H peridium I–K ascospores L–N asci. Scale bars: 20 μm (G); 10 μm (H–N).
Figure 7 from: Long S, Liu L, Pi Y, Wu Y, Lin Y, Zhang X, Long Q, Kang Y, Kang J, Wijayawardene NN, Wang F, Shen X, Li Q (2021) New contributions to Diatrypaceae from karst areas in China. MycoKeys 83: 1-37. https://doi.org/10.3897/mycokeys.83.68926
Figure 7 Neoeutypella baoshanensis (GMB0052) A stromata on host substrate B close-up of stromata C transverse section through ascostroma D vertical section through ascostroma E pigments in KOH F culture on PDAG section through the ascostroma H ostiolar canal I, J ascospores K–M asci. Scale bars: 20 μm (G); 10 μm (H–M).
Figure 1 from: Long S, Liu L, Pi Y, Wu Y, Lin Y, Zhang X, Long Q, Kang Y, Kang J, Wijayawardene NN, Wang F, Shen X, Li Q (2021) New contributions to Diatrypaceae from karst areas in China. MycoKeys 83: 1-37. https://doi.org/10.3897/mycokeys.83.68926
Figure 1 Phylogram generated from Maximum Likelihood (RAxML) analyses, based on ITS-β-tubulin matrix. ML bootstrap supports (≥ 70%) and Bayesian posterior probability (≥ 0.90) are indicated as ML/BYPP. The tree is rooted to Kretzschmaria deusta (CBS 826.72) and Xylaria hypoxylon (CBS 122620). Ex-type strains are in red. Newly generated strains are in black bold.
The impact of long-term non-pharmaceutical interventions on COVID-19 epidemic dynamics and control: the value and limitations of early models
<p>Mathematical models of epidemics are important tools for predicting epidemic dynamics and evaluating interventions. Yet, because early models are built on limited information, it is unclear how long they will accurately capture epidemic dynamics. Using a stochastic SEIR model of COVID-19 fitted to reported deaths, we estimated transmission parameters at different time points during the first wave of the epidemic (March–June, 2020) in Santa Clara County, California. Although our estimated basic reproduction number (R0) remained stable from early April to late June (with an overall median of 3.76), our estimated effective reproduction number (RE) varied from 0.18 to 1.02 in April before stabilizing at 0.64 on 27 May. Between 22 April and 27 May, our model accurately predicted dynamics through June; however, the model did not predict rising summer cases after shelter-in-place orders were relaxed in June, which, in early July, was reflected in cases but not yet in deaths. While models are critical for informing intervention policy early in an epidemic, their performance will be limited as epidemic dynamics evolve. This paper is one of the first to evaluate the accuracy of a nearly epidemiological compartment model over time to understand the value and limitations of models during unfolding epidemics.</p>
FIGURE 1 in Three new species of Collembola (Arthropoda: Hexapoda) from Central Brazilian shallow caves: side effects of long term application of environmental law on conservation
FIGURE 1. Arrhopalites glabrofasciatus sp. nov.: habitus of female mounted in slide.
Fig. 3 in Variation In The Nucleolar Organiser Regions Of The Long-Tailed Giant Rats (Rodentia, Muridae, Genus Leopoldamys) In Malaysia
Fig. 3. Leopoldamys sabanus (from Janda Baik, Pahang) with a contrasting orange stripe on the flank demarcationg the dark dorsum and pale venter.
Figure 8 from: Pi YH, Long SH, Wu YP, Liu LL, Lin Y, Long QD, Kang JC, Kang YQ, Chang CR, Shen XC, Wijayawardene NN, Zhang X, Li QR (2021) A taxonomic study of Nemania from China, with six new species. MycoKeys 83: 39-67. https://doi.org/10.3897/mycokeys.83.69906
Figure 8 Nemania lishuicola (GMB0065, holotype) A type material B stromata on the surface of host C pigments in 10% KOHD transverse sections of stromata E longitudinal sections of stromata F ascospore with indehiscent perispore in 10% KOHG–I asci with ascospores J ascus apical apparatus (stained in Melzer's Reagent) K, L colonies on PDA (K-upper, L-lower) M–P ascospores. Scale bars: 0.5 mm (B, D, E); 10 μm (F–J, M–P).
Figure 7 from: Pi YH, Long SH, Wu YP, Liu LL, Lin Y, Long QD, Kang JC, Kang YQ, Chang CR, Shen XC, Wijayawardene NN, Zhang X, Li QR (2021) A taxonomic study of Nemania from China, with six new species. MycoKeys 83: 39-67. https://doi.org/10.3897/mycokeys.83.69906
Figure 7 Nemania feicuiensis (GMB0059, holotype) A type material B, C stromata on the surface of host D transverse sections of stromata E longitudinal sections of stromata F–H asci with ascospores I pigments in 10% KOHJ ascospore with indehiscent perispore in 10% KOHK ascus apical apparatus (stained in Melzer's Reagent) L, M ascospores N, O colonies on PDA (N-upper, O-lower). Scale bars: 0.5 mm (C–E); 10 μm (F–H, J–M).
Figure 6 from: Pi YH, Long SH, Wu YP, Liu LL, Lin Y, Long QD, Kang JC, Kang YQ, Chang CR, Shen XC, Wijayawardene NN, Zhang X, Li QR (2021) A taxonomic study of Nemania from China, with six new species. MycoKeys 83: 39-67. https://doi.org/10.3897/mycokeys.83.69906
Figure 6 Nemania diffusa (GMB0072) A specimen B, C stromata on the surface of host D transverse sections of stromata E longitudinal sections of stromata F–H asci with ascospores I pigments in 10% KOHJ ascospore with indehiscent perispore in 10% KOHK ascus apical apparatus (stained in Melzer's Reagent) L, M ascospores N, O colonies on PDA (N-upper, O-lower). Scale bars: 0.5 mm (C–E); 10 μm (F–H, J–M).
Figure 9 from: Pi YH, Long SH, Wu YP, Liu LL, Lin Y, Long QD, Kang JC, Kang YQ, Chang CR, Shen XC, Wijayawardene NN, Zhang X, Li QR (2021) A taxonomic study of Nemania from China, with six new species. MycoKeys 83: 39-67. https://doi.org/10.3897/mycokeys.83.69906
Figure 9 Nemania rubi (GMB0064, holotype) A type material B, C stromata on surface of host D transverse sections of stromata E longitudinal section of stromata F–H asci with ascospores I pigments in 10% KOHJ ascospore with indehiscent perispore in 10% KOHK ascus apical apparatus (stained in Melzer's Reagent) L, M ascospores N, O colonies on PDA (N-upper, O-lower). Scale bars: 0.5 mm (C–E); 10 μm (F–H, J–M).
Figure 5 from: Pi YH, Long SH, Wu YP, Liu LL, Lin Y, Long QD, Kang JC, Kang YQ, Chang CR, Shen XC, Wijayawardene NN, Zhang X, Li QR (2021) A taxonomic study of Nemania from China, with six new species. MycoKeys 83: 39-67. https://doi.org/10.3897/mycokeys.83.69906
Figure 5 Nemania cyclobalanopsina (GMB0062, holotype) A type material B, C stromata on the surface of host D transverse sections of stromata E longitudinal sections of stromata F–H asci with ascospores I pigments in 10% KOHJ ascospore with indehiscent perispore in 10% KOHK ascus apical apparatus (stained in Melzer's Reagent) L, M ascospores N, O colonies on PDA (N-upper, O-lower). Scale bars: 0.5 mm (C–E); 10 μm (F–H, J–M).
Figure 3 from: Pi YH, Long SH, Wu YP, Liu LL, Lin Y, Long QD, Kang JC, Kang YQ, Chang CR, Shen XC, Wijayawardene NN, Zhang X, Li QR (2021) A taxonomic study of Nemania from China, with six new species. MycoKeys 83: 39-67. https://doi.org/10.3897/mycokeys.83.69906
Figure 3 Nemania caries (GMB0070) A type material B, C stromata on the surface of host D transverse sections of stromata E longitudinal section of stroma F–H asci with ascospores I pigments in 10% KOHJ ascospore with indehiscent perispore in 10% KOHK ascus apical apparatus (stained in Melzer's Reagent) L, M ascospores N, O Colonies on PDA (N-upper, O-lower). Scale bars: 0.5 mm (C–E); 10 μm (F–H, J–M).
Figure 4 from: Pi YH, Long SH, Wu YP, Liu LL, Lin Y, Long QD, Kang JC, Kang YQ, Chang CR, Shen XC, Wijayawardene NN, Zhang X, Li QR (2021) A taxonomic study of Nemania from China, with six new species. MycoKeys 83: 39-67. https://doi.org/10.3897/mycokeys.83.69906
Figure 4 Nemania changningensis (GMB0056, holotype) A type material B, C stromata on the surface of host D transverse sections of stromata E longitudinal section of stroma F–H asci with ascospores I pigments in 10% KOHJ, K asci apical apparatus (stained in Melzer's Reagent) L, M ascospores N, O colonies on PDA (N-upper, O-lower). Scale bars: 0.5 mm (C–E); 10 μm (F–H, J–M).
Figure 2 from: Pi YH, Long SH, Wu YP, Liu LL, Lin Y, Long QD, Kang JC, Kang YQ, Chang CR, Shen XC, Wijayawardene NN, Zhang X, Li QR (2021) A taxonomic study of Nemania from China, with six new species. MycoKeys 83: 39-67. https://doi.org/10.3897/mycokeys.83.69906
Figure 2 Nemania camelliae (GMB0068, holotype) A type material B, C stromata on the surface of host D transverse section of stroma E longitudinal section of stroma F–H asci with ascospores I pigments in 10% KOHJ ascospore with indehiscent perispore in 10% KOHK ascus apical apparatus (stained in Melzer's Reagent) L, M ascospores N, O colonies on PDA (N-upper, O-lower). Scale bars: 0.5 mm (C–E); 10 μm (F–H, J–M).
Figure 1 from: Pi YH, Long SH, Wu YP, Liu LL, Lin Y, Long QD, Kang JC, Kang YQ, Chang CR, Shen XC, Wijayawardene NN, Zhang X, Li QR (2021) A taxonomic study of Nemania from China, with six new species. MycoKeys 83: 39-67. https://doi.org/10.3897/mycokeys.83.69906
Figure 1 RAxML tree based on analysis of a combined dataset of ITS, α-actin, rpb2 and β-tubulin sequences from taxa of Nemania and related genera. Bayesian posterior probability (PP) ≥ 0.90 is marked at the node and the maximum likelihood bootstrap support (BS) values greater than ≥ 75%; a dash ("-") indicates a value < 0.90 (PP) or < 75% (BS). The strain number is indicated after the species name. The here-studied strains are in bold and new species are indicated in red.
FIGURE 3 in The long-tongued Cretaceous scorpionfly Parapolycentropus Grimaldi and Rasnitsyn (Mecoptera: Pseudopolycentropodidae): New data and interpretations
FIGURE 3. Photomicrographs of Parapolycentropus sp., a small, possibly new species. A. Small aggregation (swarm?) of 3 males, JZC Bu433; B. Detail of one male in aggregation. C. Female, JZC Bu1329.
Figs. 54–59. 54, 55 in Oocytes, Eggs, and Ovarioles of Some Long-Tongued Bees (Hymenoptera: Apoidea)
Figs. 54–59. 54, 55. SEM micrographs of anterior pole (frontal view) and posterior end (lateral view) of mature oocyte of Melecta albifrons albovaria, showing chorionic ornamentation. 56–58. SEM micrographs of dried egg of Melecta species. 56. Anterior end of egg with micropylar area identified by large rectangle. 57. Closeup of micropylar area of fig. 58; note unexplained apparent absence of pores. 58. Closeup of area of chorion identified by smaller rectangle in fig. 58, showing grooves bordering polygons. 59. Anterior end of mature oocyte of Thyreomelecta kirghisia, showing polygonal pattern around micropyle and farther back, anterolateral view.
Figs. 62–65 in Oocytes, Eggs, and Ovarioles of Some Long-Tongued Bees (Hymenoptera: Apoidea)
Figs. 62–65. SEM micrographs of mature oocyte of Xeromelecta californica. 62. Anterior end showing polygonal pattern around micropylar area, lower left corner. 63. Posterior end of oocyte. 64. Chorionic patterning between near posterior end. 65. Chorionic patterning at extreme posterior end. Figs. 64 and 65 to same scale.
Health care-related economic burden of polycystic ovary syndrome in the United States: Pregnancy-related and long-term health consequences - supplemental data
<p><b>Context: </b>Polycystic ovary syndrome (PCOS) is the most common endocrine disorder of reproductive-aged women, affecting approximately 5-20% of women of reproductive age. A previous estimate noted that the economic burden of PCOS approximates $3.7 billion annually in 2020 USD when considering only the costs of the initial diagnosis and of reproductive endocrine morbidities, not considering the costs of pregnancy-related and long-term morbidities.</p> <p><span><span><span><span><span><span><span><span><b>Objective: </b>To estimate the excess prevalence and economic burden of pregnancy-related and long-term health morbidities attributable to PCOS.</span></span></span></span></span></span></span></span></p> <p><span><span><span><span><span><span><span><span><b>Data Sources: </b>PubMed, EmBase and Cochrane Library.</span></span></span></span></span></span></span></span></p> <p><span><span><span><span><span><span><span><span><b>Study Selection: </b>Studies in which the diagnosis of PCOS was consistent with the Rotterdam, National Institutes of Health (NIH), or Androgen Excess & PCOS (AE-PCOS) Society criteria, or that used electronic medical record diagnosis codes, or diagnosis based on histopathologic sampling were eligible for inclusion. Studies that included an outcome of interest and a control group of non-PCOS patients who were matched or controlled for body mass index (BMI) were included. </span></span></span></span></span></span></span></span></p> <p><span><span><span><span><span><span><span><span><b>Data Extraction: </b>Two investigators working independently extracted data on study characteristics and outcomes. </span></span></span></span></span></span></span></span></p> <p><span><span><span><span><span><span><span><span><b>Data Synthesis: </b>Data was pooled using random-effects meta-analysis. The I <sup>2 </sup>statistic was used to assess inter-study heterogeneity. The quality of selected studies was assessed using the Newcastle-Ottawa Scale.</span></span></span></span></span></span></span></span></p> <p><span><span><span><span><span><span><span><span><b>Results: </b>The additional total healthcare-related economic burden due to pregnancy-related and long-term morbidities associated with PCOS in the United States is estimated to be $4.3 billion annually in 2020 USD.</span></span></span></span></span></span></span></span></p>
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.