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6,569 results for “Long-term”
Long-term testing of alkaline electrolyser single cell using Raney Ni electrodes
<p>Chronopotentiometry and polarization curves of alkaline electrolyser single cell using Raney Ni electrodes.</p>
Evolved transcriptional responses and their trade-offs after long-term adaptation of Bemisia tabaci to a marginally-suitable host
<p>Scripts and data used in the work "Evolved transcriptional responses and their trade-offs after long-term adaptation of Bemisia tabaci to a marginally-suitable host".</p> <p><strong>Abstract: </strong>Although generalist insect herbivores can migrate and rapidly adapt to a broad range of host plants, they can face significant difficulties when accidentally migrating to novel and marginally-suitable hosts. What happens, at both the performance and transcriptional levels, if these marginally-suitable hosts must be used for multiple generations before migration to a suitable host can take place, largely remains unknown. In this study, we established multigenerational colonies of the whitefly <em>Bemisia tabaci</em>, a generalist phloem-feeding species, adapted to a marginally-suitable host (habanero pepper) or an optimal host (cotton). We used reciprocal host tests to estimate the differences in performance of the populations on both hosts under optimal (30 <sup>o</sup>C) and mild-stressful (24 <sup>o</sup>C) temperature conditions, and documented the associated transcriptomic changes. The habanero pepper-adapted population greatly improved its performance on habanero pepper but did not reach its performance level on cotton, the original host. It also showed reduced performance on cotton, relative to the non-adapted population, and an antagonistic effect of the lower-temperature stressor. The transcriptomic data revealed that most of the expression changes, associated with long-term adaptation to habanero pepper, can be categorized as “evolved” with no initial plastic response. Three molecular functions dominated: enhanced formation of cuticle structural constituents, enhanced activity of oxidation-reduction processes involved in neutralization of phytotoxins and reduced production of proteins from the cathepsin B family. Taken together, these findings indicate that generalist insects can adapt to novel host plants by modifying the expression of a relatively small set of specific molecular functions.</p>
Long-term dataset of stable isotopes in rainfall at the North American monsoon region in southern Sonora, Mexico
<p>This is an original data set where rainwater samples were collected with a rain bucked prepared to avoid isotopic fractionation following the indication from the International Atomic Energy Agency (IAEA). We use a rainfall collector containing mineral oil, and samples from the collector were extracted within a maximum of 24 hours from the rain event and sometimes soon after precipitation ceased. Isotope analyses were carried with laser spectroscopy using working standards calibrated against the accepted Vienna Standard Meteoric Oceanic Water (VSMOW) for international reference and comparison. We analyzed the isotopic composition of 138 rain samples collected a permanent location with the aid of a rain bucket containing mineral oil. Samples were collected soon after every rainfall event between July 2014 and December 2021. Rainfall was collected at one permanent location at a residential area in Ciudad Obregon, Sonora Mexico within the Cajeme municipality (27.511850, -109.956316) in the transition zone between the urban and agricultural area in the northeastern edge of the city.</p>
Evolution repeats itself in replicate long-term studies in the wild
<p>The extent to which evolution is repeatable remains debated. Here we study changes over time in the frequency of cryptic color-pattern morphs in 10 replicate long-term field studies of a stick-insect, each spanning at least a decade (across 30 years of total data). We find predictable 'up-and-down' fluctuations in stripe frequency in all populations, representing repeatable evolutionary dynamics based on standing genetic variation. A field experiment demonstrates that these fluctuations involve negative frequency-dependent natural selection (NFDS). These fluctuations rely on demographic and selective variability that pushes populations away from equilibrium, such that they can reliably move back towards it via NFDS. Finally, we show that the origin of new cryptic forms is associated with multiple structural genomic variants such that which mutations arise affects evolution at larger temporal scales. Thus, evolution from existing variation is predictable and repeatable, but mutation adds complexity even for traits evolving deterministically under natural selection.</p>
Technoeconomic dataset for long-term energy systems modelling in Ghana (2015-2065)
<div> <p>Technoeconomic data and assumptions for energy systems modelling in Ghana, including capital cost, fixed cost, variable cost, power plants' characteristics (e.g. list of existing power plants in Ghana, operational life, efficiency, capacity factors), fuels' prices and emission intensities, power demand/consumption/generation, residual capacity, fossil fuels' reserves, and renewable energy potentials in 2015-2065. This document is complementary to CCG Starter Data Kit for Ghana (Allington et al., 2023) as it updates it to ensure the OSeMOSYS models are closer to the Ghanaian context.</p> </div>
Short-term heat waves have long-term consequences for parents and offspring in stickleback
<p>Extreme temperature events, such as heat waves, can have lasting effects on the behavior, physiology, and reproductive success of organisms. Here we examine the impact of short-term exposure to a simulated heat wave on condition, parental care, and reproductive success in a population of threespine stickleback (Gasterosteus aculeatus), a small fish with exclusive paternal care, currently experiencing regular heat waves. Males were either exposed to a simulated heat wave (23°C) for five days or held at an ideal temperature (18°C). All males had offspring that were raised at 18°C. We found that while mass and body condition were unaffected in males exposed to a heat wave, cortisol responses were dampened across the nesting cycle compared to control males. In addition, heat wave males had longer latency for eggs to hatch, lower hatching success, and were unable to parent at the same level as control males. Offspring of heat wave males had lower body condition, affecting swimming performance. Altogether, our results highlight the long-term impact that even short-term events can have on reproductive success, parental behavior, and subsequent generations, providing insight into population responses to rapid environmental change.</p>
Data from: Long-term severe hypoxia adaptation induces non-canonical EMT and a novel Wilms Tumor 1 (WT1) isoform
<p>The majority of cancer deaths are caused by solid tumors, where the four most prevalent cancers (breast, lung, colorectal and prostate) account for more than 60% of all cases (1). Tumor cell heterogeneity driven by variable cancer microenvironments, such as hypoxia, is a key determinant of therapeutic outcome. We developed a novel culture protocol, termed the Long-Term Hypoxia (LTHY) time course, to recapitulate the gradual development of severe hypoxia seen in vivo to mimic conditions observed in primary tumors. Cells subjected to LTHY underwent a non-canonical epithelial to mesenchymal transition (EMT) based on miRNA and mRNA signatures as well as displayed EMT-like morphological changes. Concomitant to this, we report production of a novel truncated isoform of WT1 transcription factor (tWt1), a non-canonical EMT driver, with expression driven by a yet undescribed intronic promoter through hypoxia-responsive elements (HREs). We further demonstrated that tWt1 initiates translation from an intron-derived start codon, retains proper subcellular localization and DNA binding. A similar tWt1 is also expressed in LTHY-cultured human cancer cell lines as well as primary cancers and predicts long-term patient survival. Our study not only demonstrates the importance of culture conditions that better mimic those observed in primary cancers, especially with regards to hypoxia, but also identifies a novel isoform of WT1 which correlates with poor long-term survival in ovarian cancer.</p>
Data from: Is adaptation associated with long-term persistence beyond a geographic range limit?
<p>Adaptation to new habitats might facilitate species' range shifts in response to climate change. In 2005, we transplanted experimental populations of coastal dune plant <em>Camissoniopsis cheiranthifolia </em>into four sites within and one site beyond its poleward range limit. Beyond-range transplants had high fitness and often delayed reproduction. To test for adaptation associated with experimental range expansion, we transplanted descendants from beyond and within-range populations after 10 generations <em>in situ</em> into two sites within the range, one at the range edge, and two sites beyond the range. We expected to detect adaptation to beyond-range conditions due to substantial genetic variation within experimental populations and environmental variation among sites. However, individuals from beyond-range experimental populations were not fitter than those from within the range when planted at either beyond-range site, indicating no adaptation to the beyond-range site or beyond-range environments in general. Beyond-range descendants also did not suffer lower fitness within the range. Although reproduction was again delayed beyond the range, late reproduction was not favored more strongly beyond than within the range, and beyond-range descendants did not delay reproduction more than within-range descendants. Persistence in beyond-range environments may not require adaptation, which could allow a rapid response to climate change.</p>
Long-term changes in taxonomic and functional composition of European marine fish communities
<p>Evidence of large-scale biodiversity degradation in marine ecosystems has been reported worldwide, yet most research has focused on few species of interest or on limited spatiotemporal scales. Here we assessed the spatial and temporal changes in the taxonomic and functional composition of fish communities in European seas over the last 25 years (1994-2019). We then explored how these community changes were linked to environmental gradients and fishing pressure. We show that the spatial variation in fish species composition is more than two times higher than the temporal variation, with a marked spatial continuum in taxonomic composition and a more homogenous pattern in functional composition. The regions warming the fastest are experiencing an increasing dominance and total abundance of r-strategy fish species (lower age of maturity). Conversely, regions warming more slowly show an increasing dominance and total abundance of K-strategy species (high trophic level and late reproduction). Among the considered environmental variables, sea surface temperature, surface salinity, and chlorophyll-a most consistently influenced communities' spatial patterns, while bottom temperature and oxygen had the most consistent influence on temporal patterns. Changes in communities' functional composition were more closely related to environmental conditions than taxonomic changes. Our study demonstrates the importance of integrating community-level species traits across multi-decadal scales and across a large region to better capture and understand ecosystem-wide responses and provides a different lens on community dynamics that could be used to support sustainable fisheries management.</p>
Conditioning, short-term and long-term memory tests of Drosophila melanogaster grown with and without predators
<p>Conditioning (i.e., associative learning) and memory tests were performed following the methods of previous studies. We used samples of 10 adult flies (males only), raised in standard conditions and aged 6-7 days. The conditioning procedure consisted of 5 training sessions separated by 20-minute intervals (i.e., spaced protocol). During associative conditioning, flies were first exposed for 30 seconds (s) to one odorant simultaneously with a mechanical shock of 2000 rpm vibration pulses of 1 s duration, delivered every 5 s by a test tube shaker (Heidolph Instruments, Schwabach, Germany). This period was followed by a 60 s rest period (no odor and no shock). Then, for 30 s, another odorant was delivered without shock. The training session ended with a second rest period of 60 s. 3-octanol and 4-methylcyclohexanol (both 0.6 mL/L of paraffin) were used as odorants. Each fly group was chosen to be conditioned randomly to either 3-octanol or 4-methylcyclohexanol. The results of the final trial (the fifth out of 5 trials, referred to as the “conditioning” group hereafter) of associative conditioning were used to characterize the learning of fruit flies. </p> <p>We tested 1 h (short-term memory, STM) and 24 h memory (LTM) retention after associative conditioning. During the memory retention assay, the flies walked to the choice point of a T-maze, in which they were exposed to two converging currents of air, one carrying 3-octanol and the other 4-methylcyclohexanol, and then allowed to choose between the two odors for 60 s. The memory score was calculated as the difference in the proportion of individuals choosing 3-octanol between flies conditioned to avoid 4-methylcyclohexanol and those conditioned to avoid 3-octanol.</p>
Long-term wastewater monitoring of SARS-CoV-2 viral loads and variants at the major international passenger hub Amsterdam Schiphol Airport: a valuable addition to COVID-19 surveillance
<p>Datasets used for the manuscript: <em>Long-term wastewater monitoring of SARS-CoV-2 viral loads and variants at the major international passenger hub Amsterdam Schiphol Airport: a valuable addition to COVID-19 surveillance</em></p> <p><em>pandemic_daily_passenger_counts.tsv</em>: An overview of daily passenger arrival counts at Amsterdam Schiphol Airport per continent of origin during the study period 16-02-2020 - 04-09-2022</p> <p><em>pre-pandemic_daily_passenger_averages.tsv: </em>An overview of mean daily passenger arrival counts at Amsterdam Schiphol Airport in the pre-pandemic period 2017-2019.</p> <p><em>viral_load_data.tsv: </em>Sample metadata (sample identifier, sampling date, flow, average # particles per ml, and flow-corrected viral-load) for samples taken at the wastewater treatment plant of Amsterdam Schiphol Airport.</p> <p><em>wastewater_variant_frequencies.tsv: </em>SARS-CoV-2 lineage estimates in samples taken at the wastewater treatment plant of Amsterdam Schiphol Airport, analyzed using whole-genome tiled amplicon sequencing.</p> <p> </p> <p> </p> <p> </p>
Effect of long-term physical disability and aging on extracellular matrix biogenesis in human skeletal muscle
<p>Supplemental Table for a study <strong>Effect of long-term physical disability and aging on extracellular matrix biogenesis in human skeletal muscle</strong></p>
Data from: Socio-ecological drivers of long-term ecosystem carbon stock trend: An assessment with the LUCCA model of the French case
Open the record for dataset details and reuse information.
Polyandry and non-random fertilisation maintain long-term genetic diversity in an isolated island population of adders (Vipera berus)
<p>Conservation genetic theory suggests that small and isolated populations should be subjected to reduced genetic diversity i.e., heterozygosity and allelic diversity. Our 34 years study of an isolated island population of adders (<em>Vipera berus</em>) in southern Sweden challenges this notion. Despite a lack of gene flow and a yearly mean estimated reproductive adult population size of only 65 adult adders (range 12 to 171), the population has been able to maintain high levels of heterozygosity and allelic diversity similar to that observed in two mainland populations. Even a 14-year major "bottleneck" i.e., a reduction in adult adder numbers, encompassing at least four adder generations, did not result in any reduction in the island adders' heterozygosity and allelic diversity. Female adders are polyandrous, and fertilisation is non-random, which our empirical data and modelling suggest underpinning the island adders' ability to maintain a high level of heterozygosity. Our empirical results and subsequent modelling suggest that the positive genetic effects of polyandry in combination with non-random fertilisation, often overlooked in conservation genetic analyses, deserve greater consideration when predicting long-term survival of small and isolated populations.</p>
Long-term triaxial testing of Opalinus Clay, P-orientation, sandy facies
<p>This data set describes a long-term (> 4 yr) rock mechanics experiment of Opalinus Clay (sandy facies) using a triaxial apparatus. The sample is consolidated and fully saturated. The bedding orientation is parallel to the main axis of the sample (P-orientation). Confining stress, axial stress and pore pressure are changed multiple times in order to investigate dilatancy, pressure diffusion coefficients and Young's modulus.</p>
Long-term data reveal fitness costs of anthropogenic prey depletion for a subordinate competitor, the African wild dog (Lycaon pictus
<p>Within carnivore guilds, dominant competitors (e.g., lions, <em>Panthera leo</em>) are limited primarily by the density of prey, while subordinate competitors (e.g., African wild dogs, <em>Lycaon pictus</em>) have been limited by the density of dominant competitors. Historically, the fitness and population density of subordinate competitors have not been tightly linked to prey density. However, populations of large herbivores have declined substantially across sub-Saharan Africa due to human impacts, and where prey depletion is severe, fitness costs for competitive subordinates may begin to outweigh the benefits of competitive release. Using long-term intensive monitoring of African wild dogs in Zambia's Luangwa Valley Ecosystem (LVE), we tested the effects of prey depletion on survival and reproduction. Our study area included four contiguous regions that varied in protection, prey density, and lion density. We fit Bayesian Cormack-Jolly-Seber and closed-capture models to estimate effects on survival and population density, and generalized linear models to estimate effects on reproductive success. We found that the LVE is a stronghold for wild dogs, with an estimated median density of 4.0 individuals/100 km<sup>2</sup>. Despite this high density, survival and reproduction differed among regions, and both components of fitness were substantially reduced in the region with the lowest prey density. Anthropogenic prey depletion is becoming an important limiting factor for African wild dogs. If prey depletion (or any other form of habitat degradation) becomes severe enough that its fitness costs outweigh the benefits of competitive release, such changes can fundamentally alter the balance between limiting factors for competitively subordinate species.</p>
Long-term ecological studies' practices and goals for trainees
<p>We created a survey for the other authors in the 2024 <em>Ecology Letters</em> special issue on very long-term ecological studies about their practices and goals for trainees. We received 27 responses from researchers around the world studying a broad range of organisms across ecosystems. In more than half of the responding programs, undergraduate students collect, curate, and analyze data, as well as develop research questions, present at conferences, and contribute to writing scientific papers. Unlike our program, which primarily recruits from one university, other long-term studies often target a variety of institutions (79% of respondents). About half reported targeted recruitment of students from marginalized identities and a similar proportion paid students for their work. Students were slightly more likely to collaborate with a cohort of other students (3.8 in 1-5 Likert scale) and have peer cohort building activities (3.6 in 1-5 Likert scale). When asked to rank the helpful characteristics of long-term studies to undergraduate students, top choices included "links between research, internship, classes", "extensive professional networks", "rich data", and "robust logistics". The rank of "paid salaries" was split, with about a third of the programs ranking it least helpful to students but the other third of programs ranking it either as the first or second most helpful attribute of long-term programs. Based on comments related to funding, the low salary ranking might be associated with student funding opportunities available through university grants or independent fellowships. Overall, this suggests the most impactful transformation long-term studies can make is to advocate for paying trainees in future grant proposals.</p>
Hydrologic data from long-term research catchments at the Santa Rita and Jornada Experimental Ranges
<p>This datasets contains ecohydrological data collected for the research catchments at the Santa Rita Experimental Range (SRER, 31.817° N, -110.851° W) in southern of Arizona and the Jornada Experimental Range (JER, 32.585° N, -106.603° W) in southern New Mexico. The SRER catchment correspond to a mesquite savanna of the Sonoran Desert and the JER catchment is a mixed shrubland of the Chihuahuan Desert.</p> <p>Dataset includes the following ecohydrological variables at a daily scale:</p> <ul> <li>Year of measurement.</li> <li>Day of year (DOY) of measurement.</li> <li>Precipitation (<em>P</em>).</li> <li>Evapotranspiration (<em>ET</em>).</li> <li>Runoff (<em>Q</em>).</li> <li>Soil moisture (<em>SM</em>).</li> <li>Net Radiation (<em>R<sub>n</sub></em>).</li> <li>Sensible heat flux (<em>H</em>).</li> <li>Latent heat flux (<em>λET</em>).</li> <li>Gross primary production (<em>GPP</em>).</li> <li>Ecosystem respiration (<em>R<sub>eco</sub></em>).</li> <li>Net ecosystem exchange (<em>NEE</em>).</li> <li>Air Temperature (<em>Tair</em>).</li> <li>Relative Humidity (<em>RH</em>).</li> <li>Vapour Pressure Deficit (<em>VPD</em>).</li> </ul> <p>Please cite the next data note together with the dataset:</p> <p>Vivoni, E. R., Perez-Ruiz, E. R., Keller, Z. T., Escoto, E. A., Templeton, R. C., Templeton, N. P., Anderson, C. A., Schreiner-McGraw, A. P., Mendez-Barroso, L. A., Robles-Morua, A., Scott, R. L., Archer, S. R., Peters, D. P. C. 2021. Long-term Research Catchments to Investigate Shrub Encroachment in the Sonoran and Chihuahuan Deserts: Santa Rita and Jornada Experimental Ranges. <em>Hydrological Processes</em>. 35: e14031. <a href="https://urldefense.com/v3/__http://doi.org/10.1002/hyp.14031__;!!IKRxdwAv5BmarQ!OTbdNyLUWzTumWFs0u8j8dW3TT9O3UzM6XrcR-ReiWzf7vxHHKdNTKy8wR27fiHR$">http://doi.org/10.1002/hyp.14031</a></p> <p>This new version incudes three new variables (<em>Tair</em>, <em>RH</em> and <em>VPD</em>), and some carbon and water fluxes were updated to match data used in publications 1 and 2.</p> <p>Related publications:</p> <ol> <li>Perez-Ruiz, E.R., Vivoni, E.R., and Sala, O.E. 2022. <a href="https://esajournals.onlinelibrary.wiley.com/doi/10.1002/ecs2.4189" target="_blank" rel="noreferrer noopener">Seasonal Carryover of Water and Effects on Carbon Dynamics in a Dryland Ecosystem</a>. <em>Ecosphere.</em> 13(7): e4189.</li> <li>Vivoni, E.R., Perez-Ruiz, E.R., Scott, R.L., Naito, A.T., Archer, S.R., Biederman, J.A., and Templeton, N.P. 2022. <a href="http://www.sciencedirect.com/science/article/pii/S0168192321004494" target="_blank" rel="noreferrer noopener">A Micrometeorological Flux Perspective on Brush Management in a Shrub-encroached Sonoran Desert Grassland</a>. <em>Agricultural and Forest Meteorology</em>. 313: 108763.</li> <li>Schreiner-McGraw, A.P., and Vivoni, E.R. 2018. <a href="http://agupubs.onlinelibrary.wiley.com/doi/10.1029/2018WR022842">On the Sensitivity of Hillslope Runoff and Channel Transmission Losses in Arid Piedmont Slopes.</a> <em>Water Resources Research</em>. 54(7): 4498-4518.</li> <li>Schreiner-McGraw, A.P., and Vivoni, E.R. 2017. <a href="http://onlinelibrary.wiley.com/doi/10.1002/ecs2.2000/full">Percolation Observations in an Arid Piedmont Watershed and Linkages to Historical Conditions in the Chihuahuan Desert.</a> <em>Ecosphere</em>. 8(11): e02000, <a href="http://dx.doi.org/10.1002/ecs2.2000">http://dx.doi.org/10.1002/ecs2.2000</a></li> <li>Anderson, C.A., and Vivoni, E.R. 2016. <a href="http://onlinelibrary.wiley.com/wol1/doi/10.1002/2015WR018016/abstract">Impact of Land Surface States within the Flux Footprint on Daytime Land-Atmosphere Coupling in Two Semiarid Ecosystems of the Southwestern U.S.</a> <em>Water Resources Research.</em> 52: 4785-4800.</li> <li>Schreiner-McGraw, A.P., Vivoni, E.R., Mascaro, G., and Franz, T.E. 2016. <a href="http://www.hydrol-earth-syst-sci.net/20/329/2016/hess-20-329-2016.html">Closing the Water Balance with Cosmic-ray Soil Moisture Measurements and Assessing Their Relation with Evapotranspiration in Two Semiarid Watersheds.</a> <em>Hydrology and Earth System Sciences</em>. 20: 329-345.</li> <li>Pierini, N.A., Vivoni, E.R., Robles-Morua, A., Scott, R.L., and Nearing, M.A. 2014. <a href="http://onlinelibrary.wiley.com/doi/10.1002/2014WR015781/abstract">Using Observations and a Distributed Hydrologic Model to Explore Runoff Threshold Processes Linked with Mesquite Encroachment in the Sonoran Desert.</a> <em>Water Resources Research</em>. 50(10): 8191–8215.</li> <li>Templeton, R.C., Vivoni, E.R., Méndez-Barroso, L.A., Pierini, N.A., Anderson, C.A., Rango, A., Laliberte, A.S., and Scott, R.L. 2014. <a href="http://www.sciencedirect.com/science/article/pii/S0022169413008718">High-Resolution Characterization of a Semiarid Watershed: Implications on Evapotranspiration Estimates.</a> <em>Journal of Hydrology</em>. 509: 306-319.</li> <li>Vivoni, E.R., Rango, A., Anderson, C.A., Pierini, N.A., Schreiner-McGraw, A., Saripalli, S., and Laliberte, A.S. 2014. <a href="http://www.esajournals.org/doi/abs/10.1890/ES14-00217.1">Ecohydrology with Unmanned Aerial Vehicles.</a> <em>Ecosphere</em>. 5(10): art130. <a href="http://dx.doi.org/10.1890/ES14-00217.1">http://dx.doi.org/10.1890/ES14-00217.1</a></li> </ol> <p> </p>
Assessment of the Effectiveness of Coarse Resolution Fire Products in Monitoring Long-term Changes in Fire Regime within Protected Areas in South Africa
<p>The dataset includes fire histrory (shapefiles with data perimeters for 2003-2020) within 3 protected areas in South Africa, Blyde, Manyeleti, and Songimvelo.</p>
Observed changes in significant wave heights derived from long-term homogenized measurements offshore mainland Portugal
<p>The data set contains statistical estimators of significant height acquired over the last 40 years by wave stations operating on the Portuguese coast; Monthly Mean, Monthly Maximum and the monthly 99, 95, 90, 50 , 10 percentiles</p> <p>The data was calculated based on long-term homogenized 3h series of in-situ significant wave height</p> <p>These buoys have been maintained by the Instituto Hidrografico and constitute one of the longest time series of wave data.</p> <p>Each file correspond to a particular wave station. All files are in ASCII and have the same 9 column format. The heading identify the variables</p> <p>Leixoes_corr_monthly_percentiles.txt - Data acquired by Leixoes buoy: Location 41º 19.00' N 8º 59.00' W, depth app 100 m</p> <p>Sines_corr_monthly_percentiles.txt - Data acquired by Sines buoy: Location 37º 55.27' N 8º 55.73 ' W, depth app 100 m</p> <p>Faro_coor_monthly_percentiles.txt - Data acquired by Faro buoy: Location 36º 54.28' N 7º 53.90' W, depth app 100 m</p> <p> </p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.