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opencc-zeroSep 2019View details →

FIG. 1 in The modern ontological natures of the Cairina moschata (Linnaeus, 1758) duck. Cases from Perú, the northern hemisphere, and digital communities

FIG. 1. — Adult joque drake Cairina moschata (Linnaeus, 1758). Drawing by Jorge Gamboa after Ortiz de la Puente (1952).

opencc-by-4.0Mar 2020View details →

Replication Package for the paper: "Behind the Intents: An In-depth Empirical Study on Software Refactoring in Modern Code Review"

This is the replication package for the paper: "Behind the Intents: An In-depth Empirical Study on Software Refactoring in Modern Code Review", published at the 17th International Conference on Mining Software Repositories (MSR ’20).    It contains all the preliminary and final results of our empirical methodology. We highlight the manual classification of developers' intents behind code changes with refactoring operations. This might be used for further studies on developers' motivations when performing refactoring.    Feel free to use any part of this replication package in your study, please cite as: Matheus Paixão, Anderson Uchôa, Ana Carla Bibiano, Daniel Oliveira, Alessandro Garcia, Jens Krinke, and Emilio Arvonio. 2020. Behind the In-tents: An In-depth Empirical Study on Software Refactoring in Modern Code Review. In 17th International Conference on Mining Software Repositories (MSR ’20), October 5–6, 2020, Seoul, Republic of Korea. ACM, New York, NY,USA, 11 pages.

Fig. 11 in Erect bifoliate species of Microporella (Bryozoa, Cheilostomata), fossil and modern

Fig. 11 (opposite page). Microporella modesta sp. nov., Recent, Algeria. A–C. Holotype NHMUK 1869.10.6.6a (unbleached). A. General view of the branch tip. B. Group of autozooids at the branch tip. C. Close-up of the orifice with four oral spine bases, suboral mucro concealing the ascopore, and avicularium with the long, pointed mandible open. D–F. NHMUK 1869.10.6.6b. D. Group of zooids, mostly ovicellate. E. Close-up of ovicells. F. Close-up of an orifice and two aVicularia, the one on the left with intramural budding. G. NHMUK 1869.10.6.6c, ascopore. H. NHMUK 1869.10.6.6d, damaged zooid with two aVicularia on the left zooidal margin. Scale bars: A, D = 1 mm; B = 200 µm; C, F–H = 100 µm; E = 500 µm.

Fig. 13 in Erect bifoliate species of Microporella (Bryozoa, Cheilostomata), fossil and modern

Fig. 13. Geographical distribution of the nine bifoliate species of Microporella Hincks, 1877 known to date. Red circles indicate fossil occurrences, while black lozenges indicate living records. 1 = M. bifoliata, Miocene, Maryland, USA; 2 = M. tanyae sp. nov., Pliocene, Virginia, USA; 3 = M. hastigera (Busk, 1884), Recent, Azores, Central Atlantic; 4 = M. hyadesi (Jullien, 1888), Recent, Falklands Islands and Magellan Strait, South Atlantic; 5 = M. ordo Brown, 1952, Pleistocene (Wanganui Basin) to Recent (Spirits Bay) New Zealand; 6 = M. ordoides sp. nov., Recent, Campbell Plateau, New Zealand; 7 = M. lingulata sp. nov., Recent, Foveaux Strait, New Zealand; 8 = M. modesta sp. nov., Recent, Mediterranean off Algeria; 9 = M. sp. 1, Recent, Puysegur Bank, New Zealand.

Fig. 12 in Erect bifoliate species of Microporella (Bryozoa, Cheilostomata), fossil and modern

Fig. 12. Microporella sp. 1, BLEED 151, Recent, Puysegur Bank. A. General view of the branch fragment. B. Group of autozooids. C. Close-up of orifice, ascopore and aVicularium. D. Close-up of an autozooid with paired avicularia. E. Close-up of an autozooid with avicularium showing intramural budding. Scale bars: A = 1 mm; B = 500 µm; C–E = 150 µm.

Fig. 10 in Erect bifoliate species of Microporella (Bryozoa, Cheilostomata), fossil and modern

Fig. 10. Microporella lingulata sp. nov., paratypes, Recent, Foveaux strait, New Zealand. A–B. NIWA 144887. A. Group of ovicellate and non-ovicellate zooids. B. Close-up of an autozooid showing the reniform, cribrate ascopore. C–D. NIWA 144888. C. General view of the branch proximal tip including the ancestrular area. D. Close-up of damaged ancestrula and periancestrular zooids. E–F. NIWA 144889. E. Ovicellate zooids. F. Close-up of orifice, ascopore and aVicularium in an oVicellate zooid. Scale bars: A, C–E = 200 µm; B, F = 100 µm.

Fig. 7. Microporella ordo Brown, 1952 in Erect bifoliate species of Microporella (Bryozoa, Cheilostomata), fossil and modern

Fig. 7. Microporella ordo Brown, 1952, Recent, Spirits Bay, New Zealand. A–C. NIWA 144880. A. General view of a branch fragment. B. Group of ovicellate and non-ovicellate zooids. C. Close-up of two autozooids, that on the right with preserVed filigree sieVe plate. D. NIWA 144881, transversal view of the bifoliate branch showing multiporous septula. E–F. NIWA 144882. E. Group of unbleached autozooids showing opercula and thin, pointed avicularian mandibles. F. Close-up of the ascopore and the aVicularian mandible. Scale bars: A = 1 mm; B, D–E = 200 µm; C = 100 µm; F = 50 µm.

Fig. 6 in Erect bifoliate species of Microporella (Bryozoa, Cheilostomata), fossil and modern

Fig. 6. Microporella hyadesi (Jullien, 1888), Recent, Discovery Expedition. A–D. NHMUK 1990.10.22.14. A. General view of a branch fragment. B. Group of zooids, one ovicellate, at the growing edge of the branch. Note the growing edge intermediate between a smooth and a stepped edge. C. Closeup of the orifice, ascopore and adVentitious aVicularia. Note also the borehole patched by an aVicularium (top centre). D. Group of zooids showing seVeral repared boreholes and sealed orifices. E–F. NHMUK 1990.10.10.25. E. Aberrant autozooid with smooth, non-pseudoporous frontal shield. F. Close-up of three ovicellate zooids, the ovicell on the left showing teratology. G. NHMUK 1990.10.31.12, autozooids with adventitious avicularia preserving triangular mandibles. Scale bars: A–B = 1 mm; C, E–G = 200 µm; D = 400 µm.

Fig. 3 in Erect bifoliate species of Microporella (Bryozoa, Cheilostomata), fossil and modern

Fig. 3. Microporella tanyae sp. nov., holotype, NHMUK PI BZ 8890, Pliocene, Yorktown Formation, Virginia, USA. A. Group of ovicellate and non-ovicellate zooids. B. Close-up of an ovicell. C. Closeup of an autozooid. D. Close-up of the ascopore and avicularium with intramural buds. Scale bars: A = 400 µm; B–C = 200 µm; C = 200 µm; D = 40 µm.

Fig. 5 in Erect bifoliate species of Microporella (Bryozoa, Cheilostomata), fossil and modern

Fig. 5. Microporella hastigera (Busk, 1884), paralectotype, NHMUK 1887.12.9.549a (bleached), Recent, Challenger Expedition, St. 75. A. Group of zooids at branch bifurcation. B. Close-up of two ovicellate zooids with coalescent ovicells. C. Close-up of an orifice with four oral spine bases distally, ascopore and avicularium. D. Close-up of the ascopore. E. OVicellate zooid with sealed orifice. F. Closeup of an orifice with three oral spine bases distally. Scale bars: A–B = 400 µm; C = 100 µm; D = 40 µm; E = 200 µm; F = 50 µm.

Fig. 2 in Erect bifoliate species of Microporella (Bryozoa, Cheilostomata), fossil and modern

Fig. 2. Colony of Microporella tanyae sp. nov. USNM 387373, Pliocene, Yorktown Formation, Krause Pit, lower York County, Virginia, USA (Edgar Campbell Col.).

Fig. 1 in Erect bifoliate species of Microporella (Bryozoa, Cheilostomata), fossil and modern

Fig. 1. Microporella bifoliata Ulrich & Bassler, 1904, Miocene, Choptank Formation, Maryland, USA. A–B. Lectotype USNM 68592A. A. General view of the branch fragment. B. Group of zooids, mostly ovicellate. C–D. Paralectotype USNM 68592B. C. Group of autozooids. D. Close-up of an autozooid. Scale bars: A = 1 mm; B–C = 200 µm; D = 100 µm.

Fig. 4 in Erect bifoliate species of Microporella (Bryozoa, Cheilostomata), fossil and modern

Fig. 4. Microporella hastigera (Busk, 1884), lectotype, NHMUK 1887.12.9.547 (unbleached), Recent, Challenger Expedition, St. 75. A. Group of zooids at the branch tip. B. Close-up of autozooids. C–E. Close-ups of the ascopore and adventitious avicularium with the lanceolate mandible either closed (C, E) or open (D). Scale bars: A = 500 µm; B = 200 µm; C–D = 50 µm; E = 100 µm.

A geometric morphometric approach to the study of sexual dimorphism in the modern human frontal bone

Code and data to replicate the results reported in the paper "A geometric morphometric approach to the study of sexual dimorphism in the modern human frontal bone"

opencc-by-4.0Jun 2020View details →

Building the city: from slums to a modern metropolis

This replication package contains the data and code necessary to reproduce the results in the paper “Building the City: from slums to a modern metropolis”, as well as, a readme file that gives instructions on how to use the code and access the data.

opencc-by-4.0Aug 2020View details →

Replication Package for the paper: "How Does Modern Code Review Impact Software Design Degradation? An In-depth Empirical Study"

This is the replication package for the paper: "How Does Modern Code Review Impact Software Design Degradation? An In-depth Empirical Study", published at the 36th International Conference on Software Maintenance and Evolution (ICSME' 20).   It contains all the preliminary and final results of our empirical methodology. We highlight the manual classification of design-related and design-unrelated reviews, according to the developers’ intent of improving the structural design of the system. This might be used for further studies on the impact of design discussions on the structural quality of design.   Feel free to use any part of this replication package in your study, please cite as: Anderson Uchôa, Caio Barbosa, Willian Oizumi, Publio Blenílio, Rafael Lima, Alessandro Garcia, and Carla Bezerra. How Does Modern Code Review Impact Software Design Degradation? An In-depth Empirical Study. Proceedings of the 36th International Conference on Software Maintenance and Evolution (ICSME), Adelaide, Australia, September 2020.

Figure 3 from: Kotvitska A, Prokopenko O (2020) Determination of social and economic accessibility of drugs for treatment of Parkinson's disease on the basis of modern approaches. Pharmacia 67(4): 215-221. https://doi.org/10.3897/pharmacia.67.e46586

Figure 3 The dynamics of the indicator of the availability of foreign and domestic medicines for the pensioners.

Figure 2 from: Kotvitska A, Prokopenko O (2020) Determination of social and economic accessibility of drugs for treatment of Parkinson's disease on the basis of modern approaches. Pharmacia 67(4): 215-221. https://doi.org/10.3897/pharmacia.67.e46586

Figure 2 The dynamics of the indicator of the availability of foreign and domestic medicines for the working population.

Figure 1 from: Kotvitska A, Prokopenko O (2020) Determination of social and economic accessibility of drugs for treatment of Parkinson's disease on the basis of modern approaches. Pharmacia 67(4): 215-221. https://doi.org/10.3897/pharmacia.67.e46586

Figure 1 Algorithm for conducting studies to determine the social and economic affordability of medicines for the treatment of PD.

Study of terminological subsystems of modern school textbooks in Russian with the help of word embedding models Word2Vec and neural networks

The aim of the project is to analyse the inventory and functioning of scientific terms and special lexemes in textbooks for secondary schools of the Russian Federation with the help of modern methods of natural language processing and deep learning. The number of terms from different fields of knowledge that a pupil should learn during secondary school studies has never been evaluated. According to the preliminary evaluations made on the basis of the Model Basic Curriculum for General and Secondary Education in 2015 only the subject "Russian language" presupposes that a pupil finishing the 11th grade of secondary school should be able to understand, recognise and use about 1000 terms and terminological combinations. Thus, taking into account the number of school subjects, the total number of special vocabulary units studied in general education schools is measured in thousands. At the same time, the comparative characteristics of the inventory and functioning of terms in textbooks for different school subjects are not studied and remain unknown. The correlation between the terminological density of the text in school textbooks for different subjects and the place occupied by these subjects in the curriculum is not clear. The traditional way of compiling lists of scientific terms is simply by gleaning them from special texts and writing down manually. If this method is reliable in terms of intellectualisation of selection principles, it cannot be applied to large data sets and does not reflect either the frequency of use of terms, or the specificity of their syntagmatic connections, or the systemic relationship between terms. The current project is aimed at filling this gap by means of 1) creating a full-text corpus of school textbooks for 5–11 classes included in the Federal List compiled by the Ministry of Education, 2) automatic extraction, stratification, and mapping of terms with the help of distribution semantics algorithms, 3) creation and training of a deep neural network capable of predicting the subject, level of education and educational topic given a group of vector representations of terms as input. The results of the research can be of fundamental interest in the perspective of terminology science development and also have practical applications in the creation of different types of educational literature. Funding: The reported study was funded by RFBR, project number 19-29-14032