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Figure 6 in The life history and host-searching behaviour of the aquatic parasitoid wasp Apsilops japonicus (Hymenoptera: Ichneumonidae), a parasitoid of the aquatic moth Neoshoenobia testacealis (Lepidoptera: Crambidae)
Figure 6. An Apsilops japonica female probing the leaf petiole underwater in a glass aquarium.
Figure 1 in The life history and host-searching behaviour of the aquatic parasitoid wasp Apsilops japonicus (Hymenoptera: Ichneumonidae), a parasitoid of the aquatic moth Neoshoenobia testacealis (Lepidoptera: Crambidae)
Figure 1. An Apsilops japonicus female on a floating leaf of yellow water lily in the study pond.
FIG. 4 in On the distinction of Atractocarpus heterophyllus (Montrouz.) Guillaumin & Beauvis. and A. bracteatus Schltr. & K.Krause (Rubiaceae): in search of the correct name for the type species of Atractocarpus Schltr. & K.Krause
FIG. 4. — Distribution map of Atractocarpus bracteatus Schltr. & K.Krause (■) and A. heterophyllus (Montrouz.) Guillaumin & Beauvis. (●) in New Caledonia.
Data from: Strategic pheromone signalling by mate searching females of the sexually cannibalistic spider Argiope bruennichi
<p class="MsoNoSpacing">Reproduction often requires finding a mating partner. To this end, females of many arthropods advertise their presence to searching males via volatile chemical signals. Such pheromones are considered low-cost signals, although this notion is based on little evidence and has recently been challenged. Even when utilizing comparatively low-cost signals, females should signal as little as possible to minimize costs while still ensuring mate attraction. Here we test the strategic-signalling hypothesis using <i>Argiope bruennichi</i>. In this orb-weaving spider, egg maturation commences with adult moult and females that do not attract a male in time will lay a large batch of unfertilized eggs approximately three weeks after maturation. Using GC-MS analyses, we show that virgin females enhance their signalling effort, i.e. pheromone quantity per unit body weight, with increasing age and approaching oviposition. We further demonstrate that pheromone release is condition dependent, suggesting the occurrence of physiological costs. Mate choice assays revealed that pheromone quantity is the only predictor of female attractiveness for males. In support of the strategic- signalling hypothesis, pheromone signals by female <i>A. bruennichi</i> become stronger with increased need as well as body weight, and might thus also qualify as an honest signal of female quality.</p>
SolSysELTs2022 Part II: Searching for life and habitability in our Solar System with ELTs
<p>Invited talk: presentation and video recording</p>
Search Smart export
<p>Search Smart export of academic database details.</p>
Videos of pre-service teachers' search strategies when sourcing educational information on the Internet
<p>This data is part of the study “Pre-service teachers’ search strategies when sourcing educational information on the Internet" (Zimmermann, Engel, Mayweg, 2022) and mainly consists of videos showing screen recordings of pre-service teachers sourcing for online educational information on the Internet.</p> <p>We provide</p> <p>a) 77 .mkv files entailing the videos showing participants' search behavior.</p> <p>b) a .sav file entailing the SPSS dataset, incl. variables describing the search behavior (e.g., rank on search engine result page of selected Web items) (see Zimmermann, Engel, & Mayweg, 2022).</p> <p>c) a PDF. document with a description of data collection and participants as well as the both corresponding publications:</p> <p>The related paper describing the search behavior, search strategies, and corresponding variables of the SPSS file:</p> <p>Zimmermann M., Engel, O., & Mayweg-Paus, E. (2022). Pre-service teachers’ search strategies when sourcing educational information on the Internet. Frontiers in Education, 7:976346. doi: 10.3389/feduc.2022.976346</p> <p>The related paper describing the broader experimental investigation during which the participants were asked to search for relevant online educational information:</p> <p>Zimmermann, M., & Mayweg-Paus, E. (2021). The role of collaborative argumentation in future teachers' selection of online information. Zeitschrift für Pädagogische Psychologie /German Journal of Pedagogical Psychology, 1–14. <a href="https://econtent.hogrefe.com/doi/10.1024/1010-0652/a000307">https://econtent.hogrefe.com/doi/10.1024/1010-0652/a000307</a></p>
Semi-supervised learning for sensitive open modification spectral library searching - dataset PXD009476
<p>This is the analysis results of ANN-SoLo + Rescoring as an integrated module. ANN-SoLo spectral library search engine is a tool for efficient open modification searching. ANN-SoLo uses a cascade search strategy to optimally identify both unmodified and modified peptides: in the first stage a standard search is performed to identify unmodified peptides, after which the remaining unidentified spectra are submitted to second stage during which an open search is performed to additionally identify modified peptides. We have augmented this approach by natively integrating PSM rescoring into ANN-SoLo using the mokapot Python framework for semi-supervised learning for peptide detection.</p> <p>The repository includes the results and search database used to analyze a human glycoproteomics dataset that was acquired from human kidney tissue, serum, and T cells to study O-linked glycosylation. Samples were trypsin-digested and separated into 24 fractions after enrichment of intact glycopeptides and release of O-linked glycopeptides. Next, the data was acquired on a Fusion Lumos mass spectrometer with an Easy-nLC 1200 system or a Q-Exactive HF mass spectrometer with a Waters NanoAcquity UPLC. From this dataset, four raw files derived from kidney tissue samples were retrieved from PRIDE (project PXD009476) and converted to MGF files using ThermoRawFileParser (version 1.7.2).</p> <p>The four files are available both in RAW and MGF format below. </p> <p> </p> <ul> <li>Arab, Issar, William E. Fondrie, Kris Laukens, and Wout Bittremieux. "<strong>Semisupervised Machine Learning for Sensitive Open Modification Spectral Library Searching</strong>." Journal of Proteome Research 22, no. 2 (2023): 585-593. <a title="DOI URL" href="https://doi.org/10.1021/acs.jproteome.2c00616">doi.org/10.1021/acs.jproteome.2c00616</a></li> </ul>
References to expert knowledge in Google Android, Google Search (Shopping) and Google Search (AdSense) decisions
<p>The dataset includes references to expert knowledge identified in Google Android, Google Search (Shopping), and Google Search (AdSense) decisions issued by the Commission. It is divided into types of sources invoked in the decisions (to what type of source they refer).</p>
Optimizing Performance and Energy Across Problem Sizes Through a Search Space Exploration and Machine Learning - dataset
<p>Dataset used for a journal submission at JPDC.</p>
Dataset used for: Breeding migrations by bighorn sheep males: searching for mates increases vulnerability to hunting
<p>In some species where male mating success largely depends on intrasexual competition, males can adopt migratory orresident strategies to seek breeding opportunities. The resulting mixture of resident and migrant tactics within a population can have important ecological, genetic and evolutionary consequences at the metapopulation level. Bighorn sheep <em>Ovis canadensis</em> males establish a linear dominance hierarchy that influences their mating tactics. Some males perform breeding migrations during the pre-rut and rut to seek mating opportunities, but little is known about these seasonal movements. We analysed presence/absence data for 62 marked bighorn males during six mating seasons (20-32 males/year) in the Sheep River Provincial Park, Alberta, Canada, where hunting was not allowed. On average, about half of males left their natal population to rut elsewhere. The proportion of males leaving (yearly range 15% - 69%) increased as the number of resident mature males increased and the populational sex ratio decreased, with fewer females during the pre-rut. Among those leaving the park, 24% did so in October, while the trophy sheep hunting season was open. Detailed monitoring of breeding migrations in protected populations could inform management strategies to limit evolutionary impacts of hunting.</p>
SAT-Boosted Tabu Search for Coloring Massive Graphs - Experiments
<p>The experimental data for the paper of the same name.</p>
Supplementary table to "A search for locked ORCIDs reveals a batch of odd accounts"
<p>Supplementary table for: https://doi.org/10.1007/s12262-023-03779-z</p>
CodeSearchNet Challenge: Evaluating the State of Semantic Code Search
<p>The dataset for CodeSearchNet. See https://github.com/github/CodeSearchNet and https://arxiv.org/abs/1909.09436 for more.</p>
The NANOGrav Search for Signals from New Physics: MCMC chains
<p>MCMC chains for the GWB analyses performed in the paper "<em>The NANOGrav 15 yr Data Set: Search for Signals from New Physics</em>". </p> <p>The data is provided in pickle format. Each file contains a NumPy array with the MCMC chain (with burn-in already removed), and a dictionary with the model parameters' names as keys and their priors as values. You can load them as</p> <pre><code class="language-python">with open ('path/to/file.pkl', 'rb') as pick: temp = pickle.load(pick) params = temp[0] chain = temp[1]</code></pre> <p>The naming convention for the files is the following:</p> <ul> <li><strong>igw</strong>: inflationary Gravitational Waves (GWs)</li> <li>sigw: scalar-induced GWs <ul> <li><strong>sigw_box</strong>: assumes a box-like feature in the primordial power spectrum.</li> <li><strong>sigw_delta</strong>: assumes a delta-like feature in the primordial power spectrum.</li> <li><strong>sigw_gauss</strong>: assumes a Gaussian peak feature in the primordial power spectrum.</li> </ul> </li> <li>pt: cosmological phase transitions <ul> <li><strong>pt_bubble</strong>: assumes that the dominant contribution to the GW productions comes from bubble collisions.</li> <li><strong>pt_sound</strong>: assumes that the dominant contribution to the GW productions comes from sound waves.</li> </ul> </li> <li>stable: stable cosmic strings <ul> <li><strong>stable-c</strong>: stable strings emitting GWs only in the form of GW bursts from cusps on closed loops.</li> <li><strong>stable-k</strong>: stable strings emitting GWs only in the form of GW bursts from kinks on closed loops.</li> <li><strong>stable</strong>-<strong>m</strong>: stable strings emitting monochromatic GW at the fundamental frequency.</li> <li><strong>stable-n</strong>: stable strings described by numerical simulations including GWs from cusps and kinks.</li> </ul> </li> <li>meta: metastable cosmic strings <ul> <li><strong>meta</strong>-<strong>l</strong>: metastable strings with GW emission from loops only.</li> <li><strong>meta-ls</strong> metastable strings with GW emission from loops and segments.</li> </ul> </li> <li><strong>super</strong>: cosmic superstrings.</li> <li>dw: domain walls <ul> <li><strong>dw-sm</strong>: domain walls decaying into Standard Model particles.</li> <li><strong>dw-dr</strong>: domain walls decaying into dark radiation.</li> </ul> </li> </ul> <p>For each model, we provide four files. One for the run where the new-physics signal is assumed to be the only GWB source. One for the run where the new-physics signal is superimposed to the signal from Supermassive Black Hole Binaries (SMBHB), for these files "_bhb" will be appended to the model name. Then, for both these scenarios, in the "compare" folder we provide the files for the hypermodel runs that were used to derive the Bayes' factors.</p> <p>In addition to chains for the stochastic models, we also provide data for the two deterministic models considered in the paper (ULDM and DM substructures). For the ULDM model, the naming convention of the files is the following (all the ULDM signals are superimposed to the SMBHB signal, see the discussion in the paper for more details)</p> <ul> <li><strong>uldm_e</strong>: ULDM Earth signal.</li> <li>uldm_p: ULDM pulsar signal <ul> <li><strong>uldm_p_cor</strong>: correlated limit</li> <li><strong>uldm_p_unc</strong>: uncorrelated limit</li> </ul> </li> <li>uldm_c: ULDM combined Earth + pulsar signal direct coupling <ul> <li><strong>uldm_c_cor</strong>: correlated limit</li> <li><strong>uldm_c_unc</strong>: uncorrelated limit</li> </ul> </li> <li>uldm_vecB: vector ULDM coupled to the baryon number <ul> <li><strong>uldm_vecB_cor:</strong> correlated limit</li> <li><strong>uldm_vecB_unc</strong>: uncorrelated limit </li> </ul> </li> <li>uldm_vecBL: vector ULDM coupled to B-L <ul> <li><strong>uldm_vecBL_cor:</strong> correlated limit</li> <li><strong>uldm_vecBL_unc</strong>: uncorrelated limit</li> </ul> </li> <li>uldm_c_grav: ULDM combined Earth + pulsar signal for gravitational-only coupling <ul> <li>uldm_c_grav_cor: correlated limit <ul> <li><strong>uldm_c_cor_grav_low</strong>: low mass region </li> <li><strong>uldm_c_cor_grav_mon</strong>: monopole region</li> <li><strong>uldm_c_cor_grav_low</strong>: high mass region</li> </ul> </li> <li><strong>uldm_c_unc</strong>: uncorrelated limit <ul> <li><strong>uldm_c_unc_grav_low</strong>: low mass region </li> <li><strong>uldm_c_unc_grav_mon</strong>: monopole region</li> <li><strong>uldm_c_unc_grav_low</strong>: high mass region</li> </ul> </li> </ul> </li> </ul> <p>For the substructure (static) model, we provide the chain for the marginalized distribution (as for the ULDM signal, the substructure signal is always superimposed to the SMBHB signal)</p>
Search Engines Comparison and Websites Performance
<p>The current dataset is consisted of 200 search results extracted from Google and Bing engines (100 of Google and 100 of Bing). The search terms are selected from the 10 most search keywords of 2021 based on the provided data of Google Trends. The rest of the sheets include the performance of the websites according to three technical evaluation aspects. That is, SEO, Speed and Security. The performance dataset has been developed through the utilization of CheckBot crawling tool. The whole dataset can help information retrieval scientists to compare the two engines in terms of their position/ranking and their performance related to these factors.</p> <p>For more information about the thinking of the of the structure of the dataset please contact the Information Management Lab of University of West Attica.</p> <p>Contact Persons: Vasilis Ntararas (lb17032@uniwa.gr) , Georgios Ntimo (<a href="mailto:lb17100@uniwa.gr">l</a>b17100@uniwa.gr) and Ioannis C. Drivas (idrivas@uniwa.gr)</p>
In vivo tracking of functionally tagged Rad51 unveils a robust strategy of homology search.
<p>This deposit contains all the raw data presented in the Figures of this manuscript<br> </p>
Negative emotions enhance memory-guided attention in a visual search task by increasing frontoparietal, insular, and parahippocampal cortical activity
<p>Previous literature has demonstrated that long-term memory representations guide the deployment of attentional resources during visual search in real-world pictures. However, it is currently unknown whether such a memory-guided visual search effect might be affected by the emotional context of the picture. Here, we addressed this question using functional magnetic resonance imaging (fMRI). Participants were asked to encode the position of a high-contrast target stimulus embedded in emotional (negative or positive) or neutral pictures. At retrieval, they performed a visual search for the target presented at the same location as encoding, but at a much lower contrast. Behavioral data showed that negative emotional pictures enhanced the effect of memory-guided attention, improving participants’ target detection performance. At the neural level, this effect was supported by increased activation in a large circuit of regions involving the dorsal and ventral frontoparietal cortex, insular and parahippocampal cortex. We propose that these regions might form an integrated neural circuit that is recruited to select and process previously encoded target locations (i.e., memory-guided attention sustained by the frontoparietal cortex) embedded in emotional contexts (i.e., emotional contexts recollection supported by the parahippocampal cortex and emotional monitoring supported by the insular cortex). Ultimately, these findings reveal that negative emotions can enhance memory-guided visual search performance by increasing neural activity in a large-scale brain circuit, contributing to disentangle the complex relationship between emotion, attention, and memory.</p>
Search strategies for universal vaccination with an enhanced inactivated influenza vaccine in those aged 65 years and older
<p>The dataset includes the complete, reproducible search strategies for all literature databases searched during this project. The search strategies were designed to answer the following research question: </p> <p>What is the cost-effectiveness of universal vaccination with an enhanced inactivated influenza vaccine in those aged 65 years and older?</p> <p> </p> <p> </p>
Search strategies for overview of multiplex antigen near-patient testing for acute respiratory infections
<p>The dataset includes the complete, reproducible search strategies for all literature databases searched during this project. The search strategies were designed to answer the following research questions: </p> <ul> <li>What is known about the effectiveness of multiplex antigen NPTs to correctly classify a person as having SARS-CoV-2 and influenza and or RSV or not in residential and primary care settings?</li> <li>What are the advantages and disadvantages of using multiplex antigen NPTs for the diagnosis of SARS-CoV-2 and influenza and or RSV in residential and primary care settings (for example, turnaround time, appropriateness of patient treatment, or ability to subtype viruses)?</li> <li>What is known about the feasibility (cost and resource implications) of implementing multiplex antigen NPTs for the diagnosis of SARS-CoV-2 and influenza and or RSV in residential and primary care settings?</li> </ul>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.