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8,537
datasets available to search
ShareScore release 0.9.0
Dataset results
8,537 results for “Openness”
bHLH transcription factors facilitating K+ uptake during stomatal opening are repressed by abscisic acid through phosphorylation
GEO Series GSE46574. Arabidopsis thaliana. 6 samples. Type: Expression profiling by array.
Open chromatin, HIF binding and mRNA expression analysis in podocytes (RNA-Seq).
GEO Series GSE224537. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Human centromere repositioning activates transcription and opens chromatin fibre structure
GEO Series GSE195886. Homo sapiens; Cricetulus griseus. 68 samples. Type: Genome binding/occupancy profiling by genome tiling array; Expression profiling by high throughput sequencing.
Genome-wide map of open chromatin in mouse nephron progenitor cells
GEO Series GSE131116. Mus musculus. 15 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
A transcriptional and open chromatin landscape and the role of ONECUT1 in human pancreas differentiation
GEO Series GSE167606. Homo sapiens. 68 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Open ocean and coastal strains of the N2-fixing cyanobacterium UCYN-A have distinct transcriptomes
GEO Series GSE206403. Candidatus Atelocyanobacterium thalassae. 16 samples. Type: Expression profiling by array.
Human centromere repositioning activates transcription and opens chromatin fibre structure [Agilent bTMP-chip]
GEO Series GSE195884. Homo sapiens; Cricetulus griseus. 7 samples. Type: Genome binding/occupancy profiling by genome tiling array.
Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity [DNase_seq].
GEO Series GSE30224. Homo sapiens. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
CRISPR/Cas9-mediated gene knockout screen uncovers novel open reading frames encoded in lncRNA regulating ER+ breast cancer progression
GEO Series GSE196927. Homo sapiens. 31 samples. Type: Expression profiling by high throughput sequencing; Other; Genome binding/occupancy profiling by high throughput sequencing.
A transcriptional and open chromatin landscape and the role of ONECUT1 in human pancreas differentiation [ATAC-seq]
GEO Series GSE167596. Homo sapiens. 15 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Simultaneous analysis of open chromatin, promoter interactions and gene expression in stimulated T cells implicates GWAS SNPs with causal genes
GEO Series GSE138767. Homo sapiens. 36 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Other.
Unveiling novel conserved HIV-1 open reading frames encoding T-cell antigens using ribosome profiling.
GEO Series GSE239818. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Open-ST: High-resolution spatial transcriptomics in 3D
GEO Series GSE251926. Homo sapiens; Mus musculus; synthetic construct. 27 samples. Type: Other.
ATAC-seq profiling of open chromatin in the root tips of four plant species (Arabidopsis thaliana, Medicago truncatula, Solanum lycopersicum, and Oryza sativa) and two Arabidopsis thaliana cell types
GEO Series GSE101482. Medicago truncatula; Arabidopsis thaliana; Solanum lycopersicum; Oryza sativa. 15 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Global Roads Open Access Data Set, Version 1 (gROADSv1)
The Global Roads Open Access Data Set, Version 1 (gROADSv1) was developed under the auspices of the CODATA Global Roads Data Development Task Group. The data set combines the best available roads data by country into a global roads coverage, using the UN Spatial Data Infrastructure Transport (UNSDI-T) version 2 as a common data model. All country road networks have been joined topologically at the borders, and many countries have been edited for internal topology. Source data for each country are provided in the documentation, and users are encouraged to refer to the readme file for use constraints that apply to a small number of countries. Because the data are compiled from multiple sources, the date range for road network representations ranges from the 1980s to 2010 depending on the country (most countries have no confirmed date), and spatial accuracy varies. The baseline global data set was compiled by the Information Technology Outreach Services (ITOS) of the University of Georgia. Updated data for 27 countries and 6 smaller geographic entities were assembled by Columbia University's Center for International Earth Science Information Network (CIESIN), with a focus largely on developing countries with the poorest data coverage.
NASA open-source code projects with A.I.-generated tags
A JSON that is used to build the content on code.nasa.gov. This JSON contains names, descriptions, links, and keyword tags for all NASA open-sourced code projects released through the SRA (Software Release Authority) and available on code.nasa.gov. It was updated on August, 2019.
Regeneration Alters Open Chromatin and Cis-Regulatory Landscape of Erythroid Precursors
GEO Series GSE275430. Mus musculus. 21 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
BANP opens chromatin and activates CpG-island-regulated genes
GEO Series GSE155604. Homo sapiens; Mus musculus. 115 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
Pioneer and nonpioneer factor cooperation drives lineage specific chromatin opening
GEO Series GSE125671. Mus musculus. 24 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Differentiation of Human induced Pluripotent Stem Cells to Authentic Macrophages using Defined, Serum Free, Open Source Media
GEO Series GSE171313. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.