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Fig. 2 in Apparent lack of spill-over of parasites from an invasive anuran: PCR detects Entamoeba in cane toads (Rhinella marina) but not in sympatric Australian native frogs
Fig. 2. Six of the amphibian species surveyed for Entamoeba in this study. a) Cyclorana australis, b) Litoria bicolor, c) Litoria dahlii, d) Litoria nasuta, e) Litoria rothii and f) Rhinella marina.
Fig. 4 in Mosquito identification and haemosporidian parasites detection in the enclosure of the African penguins (Spheniscus demersus) at the SANBI zoological garden
Fig. 4. Maximum likelihood tree showing the clustering of Leucocytozoon sp. (Clade I) and Plasmodium sp. (Clade II) with Haemoproteus sp. as outgroup. Sequences from this study are highlighted with red circles. (For interpretation of the references to color in this figure legend, the reader is referred to the Web version of this article.)
Fig. 3. Maximum likelihood tree for Culex species showing the 5 clades representing 5 subgroups. Clade I in Mosquito identification and haemosporidian parasites detection in the enclosure of the African penguins (Spheniscus demersus) at the SANBI zoological garden
Fig. 3. Maximum likelihood tree for Culex species showing the 5 clades representing 5 subgroups. Clade I is the Trifilatus Subgroup (Mattingly and Rageau, 1958) for Cx. torrentium; Clade II and III are the Pipiens Complex; Clade IV the Theileri Subgroup (Sirivanakarn, 1976) for Cx. theileri; and Clade V is the Tarsalis (Edwards, 1932) for Cx. declaratory and Apicinus Subgroups (Edwards, 1932) for Cx. mollis. Lutzia sp. used as outgroups. Sequences from this study are indicated by asterisks (*).
Fig. 1 in Mosquito identification and haemosporidian parasites detection in the enclosure of the African penguins (Spheniscus demersus) at the SANBI zoological garden
Fig. 1. Map of South Africa showing the National Zoological Gardens (NZG). The red star indicates where the African penguin enclosure is located and where mosquito samples were collected (Labuschagne et al., 2008). (For interpretation of the references to color in this figure legend, the reader is referred to the Web version of this article.)
Fig. 2 in A novel quantitative real-time PCR diagnostic assay for fecal and nasal swab detection of an otariid lungworm, Parafilaroides decorus
Fig. 2. Standard curve based on sensitivity data. A 95% confidence interval for the linear regression model is shaded in grey.
Fig. 1. Repeat family selection for the P. decorus diagnostic assay. A in A novel quantitative real-time PCR diagnostic assay for fecal and nasal swab detection of an otariid lungworm, Parafilaroides decorus
Fig. 1. Repeat family selection for the P. decorus diagnostic assay. A. Number of sequencing reads for P. decorus compared to outgroup species reads for each repeat family (1–104) on a log scale. Arrows indicate repeat families with no reads from the outgroup species. Plot was made using Tableau Software, 2019. B. Within a cluster, reads with similar sequences are closer together. Edges connect a read with its closest match (creating a pair) and the length of this edge represents the amount of overlap between the reads. The mean edge width provides context for the lengths in the cluster, so in a cluster with a larger mean edge width the edges are actually longer than edges in a cluster with a smaller mean edge width. Reads therefore may be distant because of sequence divergence, or in the case of a long repeat (more than 150 base pairs), because of a lack of overlap between reads. However, because there will likely be continuous reads covering different regions of the repeat, these longer repeats should still appear as a tight, though possibly larger, cluster. Read dots that stray from the central cluster most likely represent sequence divergence. Higher density therefore indicates lower sequence divergence.
Fig. 1 in Thorius narismagnus (Amphibia: Plethodontidae): rediscovery at the type locality and detection of a new population
Fig. 1. Locations of historical collection localities and the new localities of Thorius narismagnus in Los Tuxtlas region, Mexico.
Fig. 3. Evolutionary analysis conducted through a neighbor-joining phylogenetic tree between the cox1 in Detection of maize bushy stunt phytoplasma in leafoppers collected in native corn crops grown at high elevations in southeast Mexico
Fig. 3. Evolutionary analysis conducted through a neighbor-joining phylogenetic tree between the cox1 mini-barcode sequences obtained for the red speckled nymphs and Idiodonus wickhami (Hemiptera: Cicadellidae) (both marked with a circle) with reference sequences from GenBank. Bar 5 substitution in 100 positions.
Fig. 4. Evolutionary analysis conducted through a neighbor-joining phylogenetic tree between the 16S in Detection of maize bushy stunt phytoplasma in leafoppers collected in native corn crops grown at high elevations in southeast Mexico
Fig. 4. Evolutionary analysis conducted through a neighbor-joining phylogenetic tree between the 16S rRNA sequences amplified in this study from phytoplasma DNA, bar 1 substitution in 100 positions. Sequences in the grey square belong to the subgroup 16SrI-B. Sequences amplified from leafoppers (Hemiptera: Cicadellidae) Dalbulus elimatus marked with a circle and from Idiodonus wickhami marked with a square.
Fig. 7 in Detection of maize bushy stunt phytoplasma in leafoppers collected in native corn crops grown at high elevations in southeast Mexico
Fig. 7. Single nucleotide polymorphism of cpn60 UT sequences amplified from Dalbulus elimatus and Idiodonus wickhami compared with the 16SrI-B strains maize bushy stunt-Col (AB599712), maize bushy stunt-Pueb (KT444672), maize bushy stunt-Ver (KT444673), AVUT (AB599686), AY-27 (AB599688), and AY2192 (AB599687). (A) Similarities between the maize bushy stunt strains and the sequences obtained from the leafoppers. (B) Similarity between maize bushy stuntPueb and the phytoplasma detected associated with Idiodonus wickhami and similarity between maize bushy stunt-Col and maize bushy stunt-Ver with the phytoplasma associated with Dalbulus elimatus, based on SNP in cpn60 UT sequences.
Fig. 2 in Detection of maize bushy stunt phytoplasma in leafoppers collected in native corn crops grown at high elevations in southeast Mexico
Fig. 2. Idiodonus wickhami Ball. (Hemiptera: Cicadellidae). (A) Dorsal view, (B) ventral view, (C) vertex, pronotum and scutellum, (D) Male genitalia, (E-G) I. wickhami nymphs.
Fig. 6. Electrophoresis agarose gel showing RFLP pattern comparison between the F2 in Detection of maize bushy stunt phytoplasma in leafoppers collected in native corn crops grown at high elevations in southeast Mexico
Fig. 6. Electrophoresis agarose gel showing RFLP pattern comparison between the F2nR2 sequences amplified from Dalbulus elimatus and Idiodonus wickhami digested with AluI, BstUI, HaeIII, HinfI, and Tsp509I. Molecular weight (MW) marker, 1 kb plus.
Fig. 1 in Detection of maize bushy stunt phytoplasma in leafoppers collected in native corn crops grown at high elevations in southeast Mexico
Fig. 1. Six of the 7 leafopper genera (Hemiptera: Cicadellidae) detected in this study. Dorsal view of: (A) Dalbulus, (B) Macrosteles, (C) Amblysellus, (D) Graphocephala, (E) Erythridula, (F) Empoasca.
Fig. 1 in A bucket-type emergence trap for detecting overwintered Dasineura oxycoccana (Diptera: Cecidomyiidae) and its parasitoids in cranberry
Fig. 1. Bucket-type emergence trap seated into cranberry field. Inner bucket with mesh lid is descending into support bucket.
Fig. 2 in A bucket-type emergence trap for detecting overwintered Dasineura oxycoccana (Diptera: Cecidomyiidae) and its parasitoids in cranberry
Fig. 2. Number (mean + SEM) of overwintered cranberry tipworms and parasitoids detected per emergence trap per wk in 2015. Julian Date 124 = 4 May; 152 = 1 Jun; 187 = 6 Jul; 215 = 3 Aug. Number of traps per wk was 30, 50, 59, 60, 60, 46, 56, 57, 57, 57, 57, 57, 57, 57, 57, 51, 51, respectively, for the 17 wk.
Fig. 2 in Detection of Ophidiomyces ophiodiicola at two mid-Atlantic natural areas in Anne Arundel County, Maryland and Fairfax County, Virginia, USA
Fig. 2. Location of Huntley Meadows Park (HMP) snake capture locations. Black markers = all samples positive; white markers = all samples negative; gray markers = samples either positive or negative.
Fig. 1 in Detection of Ophidiomyces ophiodiicola at two mid-Atlantic natural areas in Anne Arundel County, Maryland and Fairfax County, Virginia, USA
Fig. 1. The ventral scales of a symptomatic Northern Black Racer (Coluber constrictor) infected with Ophidiomyces ophiodiicola. This 41 g male was captured and swabbed on 20 May 2018 at Huntley Meadows Park. Its total length was 123.2 cm and snout-to-vent length was 94.6 cm. Photo by Eva Lorentz.
Fig. 3 in Detection of Ophidiomyces ophiodiicola at two mid-Atlantic natural areas in Anne Arundel County, Maryland and Fairfax County, Virginia, USA
Fig. 3. Location of Smithsonian Environmental Research Center (SERC) snake capture locations. Black markers = all samples positive; white markers = all samples negative; gray markers = samples either positive or negative.
Fig. 3 in Detection of Breinlia sp. (Nematoda) in the Leadbeater's possum (Gymnobelideus leadbeateri)
Fig. 3. Relationship of the novel Breinlia sp. Taxon (in bold-type) from lung tissue from the Leadbeater's possum with members of the Onchocercidae, established by phylogenetic analysis of cytochrome c oxidase subunit 1 (cox1) sequence data employing the Bayesian method. Posterior probabilities are indicated at nodes. Mastophorus muris was used as an outgroup.
Fig. 1 in Detection of Breinlia sp. (Nematoda) in the Leadbeater's possum (Gymnobelideus leadbeateri)
Fig. 1. Photomicrographs of microfiliariae (arrows) in longitudinal orientation in impression smears of tissues of an aged, adult male Leadbeater's possum. (A) Lung. D-Q stain (× 40 magnification). (B) Lung. D-Q stain (× 40 magnification). (C) Testis. D-Q stain (× 40 magnification). Scale-bar indicates 100 μm.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.