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FIGURE 7. Poecilus puncticollis 7.1 in Contribution to the knowledge of Carabidae in Iran with the descriptions of five new taxa, proposing of four synonyms and providing of nine new records (Insecta: Coleoptera)
FIGURE 7. Poecilus puncticollis 7.1 Poecilus puncticollis habitus, Israel, scale: 5 mm. 7.2 Poecilus aeneolus holotype habitus. 7.3 Poecilus puncticollis habitus, Sulegan lagoon, scale: 5 mm. 7.4 Poecilus puncticollis Kodir, median lobe, ventral view; scale: 1 mm. 7.5 Poecilus puncticollis Sulegan lagoon, median lobe, ventral view; scale: 1 mm. 7.6 Poecilus puncticollis, Balık Gölü, inflated endophallus; scale: 1 mm. 7.7 Distribution map Poecilus puncticollis in the Middle East; P. puncticollis ●, P. hafezi ◘, type locality.
FIGURE 3C. Composite areagram showing proposed terrane relationships within Sulawesi. 1 in Biotectonics of Sulawesi: Principles, methodology, and area relationships
FIGURE 3C. Composite areagram showing proposed terrane relationships within Sulawesi. 1 = Sula Spur, 2 = Palaeogene Clade.
FIGURE 9 in Description of four IolausHübner, 1819species in the subgenus PhiliolausStempffer & Bennett, 1958 from East Africa, assigned to the proposed I. maritimus species group (Lepidoptera, Lycaenidae, Theclinae)
FIGURE 9. Female genitalia (lamella antevaginalis and papillae analis ventral view): I. bundali (paratype, Tanzania, Bundali Hills, Gen. prep.: SAFI00213)—A; I. stewarti (Malawi, Nyika Plateau, Gen. prep.: SAFI00211)—B; I. stewarti (allotype, Zambia, Mafinga Hills)—C (redrawn from Heath's (1985) original).
FIGURE 8 in Description of four IolausHübner, 1819species in the subgenus PhiliolausStempffer & Bennett, 1958 from East Africa, assigned to the proposed I. maritimus species group (Lepidoptera, Lycaenidae, Theclinae)
FIGURE 8. Female genitalia (lateral view): I. bundali (paratype, Tanzania, Bundali Hills, Gen. prep.: SAFI00213)—A; I. stewarti (Malawi, Nyika Plateau, Gen. prep.: SAFI00211)—B; I. njombe (paratype, Tanzania, Njombe, Gen. prep.: SAFI00367)— C.
FIGURE 7 in Description of four IolausHübner, 1819species in the subgenus PhiliolausStempffer & Bennett, 1958 from East Africa, assigned to the proposed I. maritimus species group (Lepidoptera, Lycaenidae, Theclinae)
FIGURE 7. Female genitalia (lateral view): I. maritimus usambara (Tanzania, Usambara, Gen. prep.: SAFI00376)—A; I. uluguru (paratype, Tanzania, Uluguru Mountains, Gen. prep.: SAFI00370)—B, I. collinsi (paratype, Mozambique, Mount Namuli, Gen. prep.: SAFI00360)—C.
FIGURE 5 in Description of four IolausHübner, 1819species in the subgenus PhiliolausStempffer & Bennett, 1958 from East Africa, assigned to the proposed I. maritimus species group (Lepidoptera, Lycaenidae, Theclinae)
FIGURE 5. Male genitalia (dorsal view): I. maritimus usambara (Tanzania, Usambara, Gen. prep.: SAFI00375)—A; I. uluguru (holotype, Gen. prep.: SAFI00369)—B; I. collinsi (holotype, Gen. prep.: SAFI00359)—C; I. njombe (Tanzania, Njombe)—D; I. stewarti (Malawi, Nyika Plateau, Gen. prep.: SAFI00210)—E; I. bundali (holotype, Gen. prep.: SAFI00212)—F.
FIGURE 3 in Description of four IolausHübner, 1819species in the subgenus PhiliolausStempffer & Bennett, 1958 from East Africa, assigned to the proposed I. maritimus species group (Lepidoptera, Lycaenidae, Theclinae)
FIGURE 3. Male genitalia: I. maritimus usambara (Tanzania, Usambara, Gen. prep.: SAFI00375) lateral view—A, aedeagus— D; I. uluguru (holotype, Gen. prep.: SAFI00369) lateral view—B, aedeagus—E; I. collinsi (holotype, Gen. prep.: SAFI00359) lateral view—C, aedeagus—F; I. njombe (Tanzania, Njombe, Gen. prep.: SAFI00366) laterial view—G, aedeagus—J; I. stewarti (Malawi, Nyika Plateau, Gen. prep.: SAFI00210) lateral view—H, aedeagus—K; I. bundali (holotype, Gen. prep.: SAFI00212) lateral view—I, aedeagus—L.
FIGURE 2 in Description of four IolausHübner, 1819species in the subgenus PhiliolausStempffer & Bennett, 1958 from East Africa, assigned to the proposed I. maritimus species group (Lepidoptera, Lycaenidae, Theclinae)
FIGURE 2. Males: I. maritimus usambara (Tanzania, Usambara) upperside—A, underside—D; I. uluguru (holotype) upperside—B, underside—E; I. collinsi (holotype) upperside—C, underside—F; I. njombe (holotype) upperside—G, underside—J; I. stewarti (Malawi, Nyika Plateau) upperside—H, underside—K; I. bundali (holotype) upperside—I, underside—L.
FIGURE 1 in Description of four IolausHübner, 1819species in the subgenus PhiliolausStempffer & Bennett, 1958 from East Africa, assigned to the proposed I. maritimus species group (Lepidoptera, Lycaenidae, Theclinae)
FIGURE 1. Male genitalia: I. maritimus maritimus (redrawn from Stempffer & Bennett's (1958) original). Uncus, subunci and vinculum with triangular process or cingulum, as referred to by Stempffer & Bennett (1958)—A, valvae and fultura inferior—B, aedeagus—C; I. maritimus usambara (redrawn from Stempffer's (1961) original). Uncus, subunci and vinculum with triangular process or cingulum—D, valvae and fultura inferior—E, aedeagus—F.
FIGURE 6 in Description of four IolausHübner, 1819species in the subgenus PhiliolausStempffer & Bennett, 1958 from East Africa, assigned to the proposed I. maritimus species group (Lepidoptera, Lycaenidae, Theclinae)
FIGURE 6. Females: I. maritimus usambara (Tanzania, Usambara) upperside—A, underside—D; I. uluguru (paratype, Tanzania, Uluguru Mountains) upperside—B, underside—E; I. collinsi (paratype, Mozambique, Mount Namuli) upperside—C, underside—F; I. njombe (paratype, Tanzania, Njombe) upperside—G, underside—J; I. stewarti (Malawi, Nyika Plateau) upperside—H, underside—K; I. bundali (paratype, Tanzania, Bundali Hills) upperside—I, underside—L.
FIGURE 10 in Description of four IolausHübner, 1819species in the subgenus PhiliolausStempffer & Bennett, 1958 from East Africa, assigned to the proposed I. maritimus species group (Lepidoptera, Lycaenidae, Theclinae)
FIGURE 10. Known localities of species in the Iolaus maritimus species group. Only type localities and identifications confirmed via examination of genitalia are illustrated.
FIGURE 4 in Description of four IolausHübner, 1819species in the subgenus PhiliolausStempffer & Bennett, 1958 from East Africa, assigned to the proposed I. maritimus species group (Lepidoptera, Lycaenidae, Theclinae)
FIGURE 4. Male genitalia (posterior view): I. maritimus usambara (Tanzania, Usambara, Gen. prep.: SAFI00375)—A; I. uluguru (holotype, Gen. prep.: SAFI00369)—B; I. collinsi (holotype, Gen. prep.: SAFI00359)—C; I. njombe (Tanzania, Njombe)— D; I. stewarti (Malawi, Nyika Plateau, Gen. prep.: SAFI00210)—E; I. bundali (holotype, Gen. prep.: SAFI00212)—F.
Fig. 2. A in Limosilactobacillus balticus sp. nov., Limosilactobacillus agrestis sp. nov., Limosilactobacillus albertensis sp. nov., Limosilactobacillus rudii sp. nov. and Limosilactobacillus fastidiosus sp. nov., five novel Limosilactobacillus species isolated from the vertebrate gastrointestinal tract, and proposal of six subspecies of Limosilactobacillus reuteri adapted to the gastrointestinal tract of specific vertebrate hosts
Fig. 2. A maximum-likelihood phylogenetic tree reconstructed using core genes (n=100) identified from whole-genome sequences, showing the evolutionary relationships among five novel Limosilactobacillus species, six L. reuteri subspecies and other recognized species in the genus Limosilactobacillus. GenBank or JGI accession numbers of these genomes are provided in parentheses. The tree was inferred based on the GTR+G model with 1000 bootstrap replicates and only bootstrap values above 60% are shown. Strains of five novel Limosilactobacillus species are labelled by different colours; labels of six L. reuteri subspecies are colour representing vertebrate host origin: green for rodents, red for pigs, blue for humans and orange for poultry. The tree was drawn with iTOL [54].
Fig. 1. A maximum-likelihood phylogenetic tree reconstructed using 16S in Limosilactobacillus balticus sp. nov., Limosilactobacillus agrestis sp. nov., Limosilactobacillus albertensis sp. nov., Limosilactobacillus rudii sp. nov. and Limosilactobacillus fastidiosus sp. nov., five novel Limosilactobacillus species isolated from the vertebrate gastrointestinal tract, and proposal of six subspecies of Limosilactobacillus reuteri adapted to the gastrointestinal tract of specific vertebrate hosts
Fig. 1. A maximum-likelihood phylogenetic tree reconstructed using 16S rRNA gene sequences. GenBank or JGI accession numbers of these genomes are provided in parentheses. The tree was inferred based on the GTR+G model with 1000 bootstrap replicates and only bootstrap values above 60% are shown. Strains of five novel Limosilactobacillus species are labelled by different colours; labels of six L. reuteri subspecies are colour representing vertebrate host origin: green for rodents, red for pigs, blue for humans and orange for poultry. The tree was drawn with iTOL [54].
Fig. 3. A in Limosilactobacillus balticus sp. nov., Limosilactobacillus agrestis sp. nov., Limosilactobacillus albertensis sp. nov., Limosilactobacillus rudii sp. nov. and Limosilactobacillus fastidiosus sp. nov., five novel Limosilactobacillus species isolated from the vertebrate gastrointestinal tract, and proposal of six subspecies of Limosilactobacillus reuteri adapted to the gastrointestinal tract of specific vertebrate hosts
Fig. 3. A maximum-likelihood phylogenetic tree reconstructed using core genes (n=100) identified from whole-genome sequences, showing the evolutionary relationships among six L. reuteri subspecies. The tree was reconstructed using 33 L. reuteri genomes available in public databases (n=6 for L. reuteri subsp. kinnaridis, n=2 for L. reuteri subsp. porcinus, n=5 for L. reuteri subsp. murium, n=10 for L. reuteri subsp. reuteri, n=5 for L. reuteri subsp. suis and n=5 for L. reuteri subsp. rodentium) and L. balticus BG-AF3-AT was used as an outgroup. Further information on the involved genome sequences is listed in Table S1. The tree was inferred based on the GTR+G model with 1000 bootstrap replicates and only bootstrap values above 60% are shown. The tree was drawn with iTOL [54].
Fig. 4 in Limosilactobacillus balticus sp. nov., Limosilactobacillus agrestis sp. nov., Limosilactobacillus albertensis sp. nov., Limosilactobacillus rudii sp. nov. and Limosilactobacillus fastidiosus sp. nov., five novel Limosilactobacillus species isolated from the vertebrate gastrointestinal tract, and proposal of six subspecies of Limosilactobacillus reuteri adapted to the gastrointestinal tract of specific vertebrate hosts
Fig. 4. Pairwise average nucleotide identity values (ANI; %) of genome sequences belonging to the same or different L. reuteri subspecies. ANI values within the same subspecies and between different subspecies were calculated for 33 L. reuteri genomes available in public databases (n=6 for L. reuteri subsp. kinnaridis, n=2 for L. reuteri subsp. porcinus, n=5 for L. reuteri subsp. murium, n=10 for L. reuteri subsp. reuteri, n=5 for L. reuteri subsp. suis and n=5 for L. reuteri subsp. rodentium). Further information on the involved genome sequences is listed in Table S1.
Supplementary material 5 from: Tochihara Y, Hosoya T (2022) Examination of the generic concept and species boundaries of the genus Erioscyphella (Lachnaceae, Helotiales, Ascomycota) with the proposal of new species and new combinations based on the Japanese materials. MycoKeys 87: 1-52. https://doi.org/10.3897/mycokeys.87.73082
Figure S5. ML best-scored phylogenetic tree based on concatenated dataset of ITS1, 5.8S, and ITS2 constructed by RAxML-NG
Fig. 2 in MaNgROVIVIRga CUNICULI gen. nov., sp. nov., a moderately halophilic bacterium isolated from bioturbated Red Sea mangrove sediment, and proposal of the novel family MaNgROVIVIRgaCeae fam. nov.
Fig. 2. (a) Maximum-likelihood phylogenetic tree based on the 16S rRNA gene sequences presenting the position of Mangrovivirga cuniculi R1DC9T (MT146883). Only bootstrap values (expressed as percentages of 1000 replications) exceeding 50% are shown at branching points. Psychroflexus torquis ATCC 700755T (GenBank accession no. U85881) was used as an outgroup. Bar, 0.040 substitutions per nucleotide position. Filled circles indicate branches that were also recovered using the neighbour-joining method. (b) Maximumlikelihood phylogenetic tree highlighting the position of R1DC9T relative to the other type strains within the order Cytophagales, including members of the families Marivirgaceae, Roseivirgaceae, Reichenbachiellaceae, Fulvivirgaceae, Cesiribacteraceae and Flammeovirgaceae. The phylogenetic tree was built using 120 concatenated single-copy genes obtained using GTDB-Tk software [34]. Bootstrap values greater than 50% based on 1000 replications are indicated at branching nodes. Bar, 0.2 substitutions per nucleotide position.
Fig. 1 in DUganella laCTea sp. nov., DUganella gUangzHOUensis sp. nov., DUganella flavida sp. nov. and Massilia rivUli sp. nov., isolated from a subtropical stream in PR China and proposal to reclassify DUganella ginsengisOli as Massilia ginsengisOli comb. nov.
Fig. 1. Neighbour-joining tree based on the concatenated 92 core genes of strains FT50WT, FT80WT, FT92WT, FT94W, FT135WT and other related strains. Bar, 0.02 substitutions per nucleotide position. Bootstrap percentages>50% based on 1000 replications are shown at the branch points.
Fig. 1 in MaNgROVIVIRga CUNICULI gen. nov., sp. nov., a moderately halophilic bacterium isolated from bioturbated Red Sea mangrove sediment, and proposal of the novel family MaNgROVIVIRgaCeae fam. nov.
Fig. 1. (a) Sediments in the mangrove forest at KAUST bioturbated by Uca species crabs; crab barrows are indicated by yellow arrows. Leaves forming mangrove litter are also visible. Bar, 10 cm. (b) Aquarium filled with mangrove bioturbated sediments and FSW for the incubation of DCs; bar, 6 cm. (c) Aerial view of DCs placed on the surface of mangrove sediments and cover with FSW inside the aquarium; bar, 6 cm.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.