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Dual gene activating and repressive functions of TET1 in germ layer lineage bifurcation distinguished by genomic context and dependence on 5-methylcytosine oxidation [10x scRNAseq]

GEO Series GSE214844. Mus musculus. 10 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2025View details →

Glycolytic activity instructs germ layer proportions through regulation of Nodal and Wnt signaling

GEO Series GSE282050. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.

Dual gene activating and repressive functions of TET1 in germ layer lineage bifurcation distinguished by genomic context and dependence on 5-methylcytosine oxidation [CUT&RUN]

GEO Series GSE227233. Mus musculus. 60 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

Dual gene activating and repressive functions of TET1 in germ layer lineage bifurcation distinguished by genomic context and dependence on 5-methylcytosine oxidation [ATACseq]

GEO Series GSE214829. Mus musculus. 16 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

Dual gene activating and repressive functions of TET1 in germ layer lineage bifurcation distinguished by genomic context and dependence on 5-methylcytosine oxidation [ATACseq 2]

GEO Series GSE227231. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

Dual gene activating and repressive functions of TET1 in germ layer lineage bifurcation distinguished by genomic context and dependence on 5-methylcytosine oxidation [RNAseq]

GEO Series GSE214828. Mus musculus. 36 samples. Type: Expression profiling by high throughput sequencing.

publicOct 2017View details →

dryad24/100

Data from: Distinct microbial communities in the active and permafrost layers on the Tibetan Plateau

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Active layer physical processes at Broeggerhalvoya, western Spitsbergen, Version 1

These data have been collected from an Arctic desert site (latitude 78o57'29N, longitude 12o27'42E), Broeggerhalvoya in western Spitsbergen, 10 km NW from Ny Alesund, 45 m above sea level, 2 km from the shore. This is a low relief tip of a bedrock peninsula covered with several meters of glacial drift and reworked raised beach ridges. The measurements are obtained in the site of well developed patterned ground, sorted polygons, where the influence of plants, including thermal insulation and transpiration, is negligible. The 1985-1986 period was average. Mean annual air temperature was -6.6 C, 0.4 C colder than the long-term (1975-1990) mean, but well within the mean variability. Mean winter air temperature is relatively warm (mean of coldest month, February, is -14.6 C). Annual precipitation was 17 % greater than the ong-term mean (372 mm); however, the number of rain-on-snow events was less (3) than average (5.5). Overall, the reference period is close to long-term averages. A program of automated soil temperature recordings was initiated in the summer of 1984, at a patterned ground field site Thermistors were placed approximately 0.1 m apart in an epoxy-filled PVC rod (18 mm outside diameter), buried in the center of a fine-grained domain of a sorted circle, down to 1.14 m below the ground surface. The data presented here covers 7/1/85-7/1/86, once a day (6 am), at two levels (0.0 m, 1.145 m below surface). The resolution of the thermistors is 0.004 C, and the accuracy is estimated to be 0.02 C near 0 C. Missing data accounts for less than 7 %. The gaps are filled with simple average of the beginning and end of the gap values. For a detailed description of the field site and data analysis see Putkonen (1997) and Hallet and Prestrud (1986). These data are presented on the CAPS Version 1.0 CD-ROM, June 1998.

Active Layer Monitoring, Arctic and Subarctic Canada, Version 6

This project involves measuring regional and site variability in maximum annual active layer development and vertical surface movement over permafrost, and monitoring sites over time in order to observe trends. The project records maximum thaw penetration, maximum heave and subsidence, late season snow depths, current depth of thaw, elevation, and soil properties. Some sites are twinned with soil- and air-temperature recording equipment.The project includes about 60 monitoring stations extending from Fort Simpson, Canada, in the upper Mackenzie River valley to the Beaufort Sea coast at North Head, Richards Island, Canada. Ten of the sites are part of the IPA's Circumpolar Active Layer Monitoring (CALM) Program. CALM site numbers are in parentheses after the site names: North Head (C3), Taglu (C4), Lousy Point (C5), Reindeer Depot (C7), Rengleng River (C8), Mountain River (C9), Norman Wells (C11), Ochre River (C13), Willowlake River (C14), and Fort Simpson (C15). See the CALM Program Web page for geographic coordinates and site history for all CALM sites.These data are the property of the people of Canada and the responsibility of the Geological Survey of Canada. If published, adequate acknowledgment is expected. Please contact F. M. Nixon regarding use of the data set or access to the extended data.

Active layer and permafrost properties, including snow depth, soil temperature, and soil moisture, Barrow, Alaska, Version 1

This data set contains soil temperature, soil moisture, thaw depth, and snow depth data collected at test sites near Barrow, Alaska, during the following years.Soil temperature data - 1963-1966, 1993 Soil moisture data - 1963 Thaw depth - 1962-1968, 1991-1993 Snow depth - 1963-1964 This study focused on characterizing the active soil layer at Barrow, and determining the relationships between and among these physical properties at permafrost sites in the Arctic.This site is U1 of the IPA's Circumpolar Active Layer Monitoring (CALM) Program and later measurements are available at the CALM Web site.

Active-Layer and Permafrost Temperatures, Soendre Stroemfjord, Greenland, Version 1

This data set contains active-layer and permafrost temperatures from two stations in Soendre Stroemfjord, Greenland. Snow depth and snow extent were also recorded. Thermometers at Station A (67 deg N, 50.8 deg W, 50 m asl) recorded temperatures once a day from September 1967 to February 1976. Thermometers at Station B (67 deg N, 50.8 deg W, 38 m asl) recorded temperatures once a day from September 1967 to August 1970; however, only bi-weekly averages are given for Station B. Data are in tab-delimited ASCII text format and are available via FTP.

Modeled Active-Layer Depth in Russia, Version 1

This data set contains modeled active-layer depth (cm) from 50 deg N to 80 deg N, and 60 deg E to 160 deg E, Russia. Depth values are calculated from a model of current climate that assumes a complex surface with inhomogenous vegetation and soil texture, and from a model of projected climate for the year 2050 that assumes uniform vegetation and soil. Tab-delimited ASCII text files contain active-layer depth values (cm) with corresponding latitudes and longitudes in decimal degrees. Maps of active-layer depth (cm) are in GIF image format. Data are available via FTP.

Active layer thickness and ground temperatures, Svea, Svalbard, Version 1

Snow and soil temperature records for January 1988 - May 1996 are presented. Included are snow depth and weight measurements, snow density (calculated), active layer depth in the frost tubes, weight of wet and dried soil samples from unknown depth within the active layer (water content calculated), and soil temperature at the surface (0.05 cm) and to the depths of 3 to 4 meters at 3 sites. The sites are 1) on a road covered by 1 m of gravel underlain by clay; 2) outside a building on piles, (sensors are placed 1 to 2 m from the building wall); and 3) under the building between piles. In addition, air temperature was measured inside the building or between the piles (documentation is not clear on this point.) There are several gaps in temperature measurements (January 1991 to May 1992). These data are presented on the CAPS CD-ROM version 1.0, June 1998.Air temperature, wind direction, and temperature were measured at 5, 20, 50, 100, 150, and 200 cm below the tundra surface at an undisturbed site; and at 5, 20, 50, 100, 150, 200 cm, and 3 m and 8 m below the concrete surface of a building. Incoming radiation, outgoing radiation, temperature of the heat flux instrument, global radiation, heat flux, wind speed, wind speed maximum, average wind speed, and temperature inside the building were measured since 1993 with data loggers. All data are recorded for July 1987 - February 1996.

Active-Layer and Permafrost Temperatures, Sisimiut (Holsteinsborg), Greenland, Version 1

This data set contains active-layer and permafrost temperatures from Sisimiut, west Greenland, recorded from 18 sensors at depths of 0.25 m, 0.5 m, 0.75 m, 1 m, 1.25 m, 1.5 m, 1.75 m, 2 m, 2.5 m, 3 m, 3.5 m, 4 m, 4.5 m, 5 m, 6 m, 7 m, 8 m, and 9 m below the surface. Snow depth, snow extent, and surface air temperature were also recorded. Thermometers recorded temperatures once a day from September 1967 to August 1982; however, this data set only contains bi-weekly averages. Data are in tab-delimited ASCII text format and are available via FTP.

Active-Layer Depth of a Finnish Palsa Bog, Version 1

This data set contains 76 active-layer depth measurements (cm) of the Vaisjeäggi palsa bog, Finland, from 08 September 1993 to 14 October 2002. Data were collected from a single location at 69 deg 49'16.6' N, 27 deg 10'17.1' E. Data also contain snow depth (cm) when snow cover was present. Data are in tab-delimited ASCII text format, and are available via ftp.