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323
datasets available to search
ShareScore release 0.9.0
Dataset results
323 results for “Binding specificity”
NextPBM - A platform to study cell-specific transcription factor binding and cooperativity [ChIP-Seq]
GEO Series GSE123872. Homo sapiens. 13 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
Functional characterization of C. elegans Y-box binding proteins reveals tissue-specific functions and a critical role in the formation of polysomes (ribosome)
GEO Series GSE62859. Caenorhabditis elegans. 4 samples. Type: Expression profiling by high throughput sequencing; Other.
Impact of cytosine methylation on DNA binding specificities of human transcription factors.
GEO Series GSE94634. synthetic construct. 16 samples. Type: Other.
DNA sequence context and the chromatin landscape differentiate sequence-specific transcription factor binding in the human malaria parasite, Plasmodium falciparum
GEO Series GSE212052. Plasmodium falciparum. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Cooperative binding of Oct4, Sox2, and Klf4 with stage-specific transcription factors orchestrates reprogramming
GEO Series GSE90895. Mus musculus. 150 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
The lincRNA Pantr1 mediates site-specific chromatin binding of FOXG1 in hippocampal neurons
GEO Series GSE272852. Mus musculus. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-Wide Progesterone Receptor Binding: Cell Type-Specific and Shared Mechanisms in Uterine Fibroids and Breast Cancer
GEO Series GSE30871. Homo sapiens. 14 samples. Type: Expression profiling by array.
Dynamic analysis of gene expression and genome wide transcription factor binding during lineage-specification of multipotent progenitors [ChIP-seq].
GEO Series GSE50406. Mus musculus. 17 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Specific methylation marks in promoter regions are associated to the pathogenic process of Chronic Chagas disease Cardiomyopathy by modifying transcription factor binding patterns [methylation]
GEO Series GSE191082. Homo sapiens. 158 samples. Type: Methylation profiling by genome tiling array.
Divergence in DNA specificity among paralogous transcription factors contributes to their differential in vivo binding [RG_E2F1-3-4_cust2_v1]
GEO Series GSE97886. Homo sapiens; synthetic construct. 5 samples. Type: Other.
Opportunistic binding of EcR to open chromatin drives tissue-specific developmental responses [CUT&RUN]
GEO Series GSE202807. Drosophila melanogaster. 20 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Rapid redistribution and extensive co-binding of NANOG and GATA6 at shared regulatory elements underlie specification of divergent cell fates [CUT&TAG, CUT&RUN]
GEO Series GSE181100. Mus musculus. 57 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Identification of lineage-specific cis-regulatory modules associated with variation in transcription factor binding and chromatin activity using Ornstein-Uhlenbeck models
GEO Series GSE59706. Drosophila melanogaster; Drosophila pseudoobscura; Drosophila virilis. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Identification of proteins and miRNAs that specifically bind an mRNA in vivo
GEO Series GSE130733. Caenorhabditis elegans. 28 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.
The binding specificity and regulatory effect of WT and redesigned Puf2p [RNA-Seq]
GEO Series GSE73227. Saccharomyces cerevisiae. 11 samples. Type: Expression profiling by high throughput sequencing.
Integrated requirement of non-specific and sequence-specific DNA binding for transcriptional regulation by Myc
GEO Series GSE147639. Mus musculus. 44 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
ZSCAN5B and its primate-specific paralogs bind RNA polymerase III genes and extra-TFIIIC (ETC) sites to modulate mitotic progression [SiRNA RNA-Seq data set]
GEO Series GSE84884. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Mapping the inter- and intra-chromosomal interactions of specific insulator binding sites with circular chromosome conformation capture (4C) assay (Gondor et al., 2008 Nature Protocol) [NimbleGen Arra
GEO Series GSE50768. Drosophila melanogaster. 3 samples. Type: Genome binding/occupancy profiling by genome tiling array.
SALL1 enforces microglia-specific DNA binding and function of SMADs to establish microglia identity [RNA-seq]
GEO Series GSE226091. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing.
The binding specificity and regulatory effect of WT and redesigned Puf2p [CLIP-Seq]
GEO Series GSE73273. Saccharomyces cerevisiae. 12 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.