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89
datasets available to search
ShareScore release 0.9.0
Dataset results
89 results for “Chromosome conformation”
Genome-wide coherence between enhancer states and 3D chromosome conformation in mouse T cell differentiation
GEO Series GSE222211. Mus musculus. 17 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
Chromosome conformation for wild type and clb5 clb6 strains arrested before meiotic S phase
GEO Series GSE196061. Saccharomyces cerevisiae. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Ultrafine Mapping of Chromosome Conformation at hundred basepair resolution reveals regulatory genome architecture
GEO Series GSE161014. Homo sapiens. 5 samples. Type: Other.
Allele-specific chromosome conformations induced by a transgene- and locus-dependent imprinting
GEO Series GSE48148. Mus musculus. 5 samples. Type: Genome binding/occupancy profiling by genome tiling array.
The inactive X chromosome adopts a unique three-dimensional conformation that is dependent on Xist RNA.
GEO Series GSE29509. Mus musculus. 28 samples. Type: Genome variation profiling by high throughput sequencing.
The development and application of LIMe-Hi-C to simultanteously study lamina association, DNA methylation and chromosome conformation at baseline and upon EZH2 and DNMT1 inhibition
GEO Series GSE180228. Homo sapiens. 13 samples. Type: Other.
Long-range epigenetic concordance revealed by simultaneous profiling of DNA methylation and chromosomal conformation changes in bulk and single cell Methyl-HiC
GEO Series GSE119171. Mus musculus. 48 samples. Type: Methylation profiling by high throughput sequencing; Other.
H3K9 methylation fine-tunes coordination of transcription by regulating the conformational plasticity of chromosomal folding [RNA-Seq]
GEO Series GSE58535. Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing.
Interphase chromosome conformation is specified by distinct folding programs inherited via mitotic chromosomes or through the cytoplasm [Hi-C]
GEO Series GSE277875. Homo sapiens. 44 samples. Type: Other.
Interphase chromosome conformation is specified by distinct folding programs inherited via mitotic chromosomes or through the cytoplasm [SLAM-seq]
GEO Series GSE309609. Homo sapiens. 42 samples. Type: Other.
Systematic evaluation of chromosome conformation capture assays
GEO Series GSE163666. Homo sapiens. 118 samples. Type: Other.
High resolution chromosome conformation capture from gene promoters at COVID-19, T1D, AS and RBC GWAS loci
GEO Series GSE159867. Homo sapiens. 17 samples. Type: Other.
Analyses of long-range interactions of the NR0B1 (DAX1) promoter using chromosome conformation capture-on-chip
GEO Series GSE64470. Homo sapiens. 6 samples. Type: Other.
Systematic evaluation of chromosome conformation capture assays [Hi-C]
GEO Series GSE165894. Homo sapiens. 96 samples. Type: Other.
Interphase chromosome conformation is specified by distinct folding programs inherited via mitotic chromosomes or through the cytoplasm
GEO Series GSE278023. Homo sapiens. 124 samples. Type: Other; Genome binding/occupancy profiling by high throughput sequencing.
Chromosome conformation capture of Jurkat T cells during parabolic flight
GEO Series GSE174291. Homo sapiens. 12 samples. Type: Other.
Chromosome conformation capture by high thoughput sequencing (HiC) during Naïve CD4 T cell activation
GEO Series GSE122051. Homo sapiens. 12 samples. Type: Other.
Regulation of transcriptional signal integration and memory by inflammation-induced chromosome conformation [Hi-C]
GEO Series GSE247940. Mus musculus. 10 samples. Type: Other.
Regulation of transcriptional signal integration and memory by inflammation-induced chromosome conformation [ATAC-Seq]
GEO Series GSE247938. Mus musculus. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Circularized chromosome conformation capture followed by sequencing (4C-seq) in A549 cell line
GEO Series GSE225518. Homo sapiens. 4 samples. Type: Other.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.