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203
datasets available to search
ShareScore release 0.9.0
Dataset results
203 results for “CpG island”
Genome-wide analysis of expression and DNA methylation at CpG-island-associated sense-antisense transcript loci in mouse
GEO Series GSE14392. Mus musculus. 47 samples. Type: Expression profiling by array; Methylation profiling by genome tiling array.
CpG island methylation data from maternal venous blood and infant cord blood samples
GEO Series GSE67976. Homo sapiens. 34 samples. Type: Methylation profiling by genome tiling array.
DNA methylome analysis of pediatric acute lymphoblastic leukemia cells reveals stochastic de novo DNA methylation in CpG islands.
GEO Series GSE76270. Homo sapiens. 49 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
Development of a novel parameter for quantification of methylation levels in MeDIP-CpG island microarray analysis
GEO Series GSE15291. Homo sapiens. 7 samples. Type: Methylation profiling by genome tiling array.
The proline and serine rich protein PROSER1 mediates O-GlcNAcylation of TET2 to regulate DNA demethylation on UTX-dependent enhancers and CpG islands [RNA-seq]
GEO Series GSE172144. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
CpG island hypermethylation in human astrocytomas
GEO Series GSE19391. Homo sapiens. 36 samples. Type: Methylation profiling by genome tiling array.
Direct ChIP-bisulfite sequencing reveals a role of H3K27me3 mediating aberrant hypermethylation of promoter CpG islands in cancer cells (ChIP-BS)
GEO Series GSE43094. Homo sapiens. 13 samples. Type: Methylation profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
CpG island-specific demethylation pathway in ES cells
GEO Series GSE48923. Mus musculus. 8 samples. Type: Methylation profiling by array.
Gene silencing triggers Polycomb Repressive Complex 2 recruitment to CpG islands genome-wide [ChIP-seq_drugs]
GEO Series GSE58019. Mus musculus. 20 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
BANP opens chromatin and activates CpG island regulated genes [RNA-Seq]
GEO Series GSE155664. Mus musculus. 44 samples. Type: Expression profiling by high throughput sequencing.
Hypermethylation of CpG Islands and Shores adjacent to mirtron and microRNA genes in bladder cancer
GEO Series GSE22380. Homo sapiens. 22 samples. Type: Non-coding RNA profiling by array.
Association between gut microbiota and CpG island methylator phenotype in colorectal cancer [16S rRNA]
GEO Series GSE237523. Homo sapiens. 228 samples. Type: Other.
KDM2 proteins constrain transcription from CpG island gene promoters independently of their histone demethylase activity [ATAC-seq]
GEO Series GSE126863. Mus musculus. 52 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
CCER1 CpG island DNA methylation
<p>CCER1 is a germline-specific and intrinsically disordered protein (IDP), mediates postmeiotic spermatid differentiation. Since methylation levels of gene CpG islands (CGIs) often correlate with their tissue-specific expression 13,and Ccer1 appears to be testis-specific; therefore, we investigated that the CGI methylation level of Ccer1 in the testes using bisulfite DNA sequencing.TA Cloning and Sanger Sequencing were performed after bisulfite conversion.</p>
A CpG island-encoded mechanism protects genes from premature transcription termination [SET1_RNAseq]
GEO Series GSE199803. Drosophila melanogaster; Mus musculus. 46 samples. Type: Expression profiling by high throughput sequencing.
Methylation detection Oligonucleotide Microarray Analysis: high resolution method for CpG island methylation detection 3.
GEO Series GSE27940. Homo sapiens. 51 samples. Type: Methylation profiling by genome tiling array.
Methylated CpG island amplification (MCA) microarray analysis of human colorectal tumors
GEO Series GSE35508. Homo sapiens. 88 samples. Type: Methylation profiling by genome tiling array.
Identification of CpG island methylator phenotype predicts the prognosis of small cell lung cancer
GEO Series GSE50412. Homo sapiens. 41 samples. Type: Methylation profiling by array.
CpG island methylator phenotype classification improves risk assessment in pediatric T-cell Acute Lymphoblastic Leukemia [RNA-seq]
GEO Series GSE272023. Homo sapiens. 111 samples. Type: Expression profiling by high throughput sequencing.
Fundamental differences in promoter CpG island DNA hypermethylation between human cancer and genetically engineered mouse models of cancer [RRBS]
GEO Series GSE45341. Homo sapiens; Mus musculus. 8 samples. Type: Methylation profiling by high throughput sequencing.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.