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226 results for “Grooming”
Supplementary material 3 from: Seebens H, Clarke DA, Groom Q, Wilson JRU, García-Berthou E, Kühn I, Roigé M, Pagad S, Essl F, Vicente J, Winter M, McGeoch M (2020) A workflow for standardising and integrating alien species distribution data. NeoBiota 59: 39-59. https://doi.org/10.3897/neobiota.59.53578
Final output files of the case study applying the SInAS workflow
Supplementary material 2 from: Seebens H, Clarke DA, Groom Q, Wilson JRU, García-Berthou E, Kühn I, Roigé M, Pagad S, Essl F, Vicente J, Winter M, McGeoch M (2020) A workflow for standardising and integrating alien species distribution data. NeoBiota 59: 39-59. https://doi.org/10.3897/neobiota.59.53578
Supplementary Tables S1–S4
Supplementary material 5 from: Seebens H, Clarke DA, Groom Q, Wilson JRU, García-Berthou E, Kühn I, Roigé M, Pagad S, Essl F, Vicente J, Winter M, McGeoch M (2020) A workflow for standardising and integrating alien species distribution data. NeoBiota 59: 39-59. https://doi.org/10.3897/neobiota.59.53578
Unresolved entries of the case study applying the SInAS workflow
Supplementary material 1 from: Seebens H, Clarke DA, Groom Q, Wilson JRU, García-Berthou E, Kühn I, Roigé M, Pagad S, Essl F, Vicente J, Winter M, McGeoch M (2020) A workflow for standardising and integrating alien species distribution data. NeoBiota 59: 39-59. https://doi.org/10.3897/neobiota.59.53578
Technical description and manual of the SInAS workflow implementation in R
Supplementary material 1 from: Walton S, Livermore L, Bánki O, Cubey RWN, Drinkwater R, Englund M, Goble C, Groom Q, Kermorvant C, Rey I, Santos CM, Scott B, Williams AR, Wu Z (2020) Landscape Analysis for the Specimen Data Refinery. Research Ideas and Outcomes 6: e57602. https://doi.org/10.3897/rio.6.e57602
Tools and services evaluation speadsheet
Figure 1 from: Walton S, Livermore L, Bánki O, Cubey RWN, Drinkwater R, Englund M, Goble C, Groom Q, Kermorvant C, Rey I, Santos CM, Scott B, Williams AR, Wu Z (2020) Landscape Analysis for the Specimen Data Refinery. Research Ideas and Outcomes 6: e57602. https://doi.org/10.3897/rio.6.e57602
Figure 1 An overview of potential Specimen Data Refinery workflows based on image inputs and their derivatives, datasets and services.
Figure 2 from: Owen D, Groom Q, Hardisty A, Leegwater T, Livermore L, van Walsum M, Wijkamp N, Spasić I (2020) Towards a scientific workflow featuring Natural Language Processing for the digitisation of natural history collections. Research Ideas and Outcomes 6: e58030. https://doi.org/10.3897/rio.6.e58030
Figure 2 A possible semi-automatic digitisation workflow to extract data from the labels of collection specimens.
Supplementary material 1 from: Wilson JRU, Datta A, Hirsch H, Keet J-H, Mbobo T, Nkuna KV, Nsikani MM, Pyšek P, Richardson DM, Zengeya TA, Kumschick S (2020) Is invasion science moving towards agreed standards? The influence of selected frameworks. In: Wilson JR, Bacher S, Daehler CC, Groom QJ, Kumschick S, Lockwood JL, Robinson TB, Zengeya TA, Richardson DM. NeoBiota 62: 569-590. https://doi.org/10.3897/neobiota.62.53243
Data used in a citation analysis of frameworks in invasion science
Supplementary material 2 from: Bertolino S, Ancillotto L, Bartolommei P, Benassi G, Capizzi D, Gasperini S, Lucchesi M, Mori E, Scillitani L, Sozio G, Falaschi M, Ficetola GF, Cerri J, Genovesi P, Carnevali L, Loy A, Monaco A (2020) A framework for prioritising present and potentially invasive mammal species for a national list. In: Wilson JR, Bacher S, Daehler CC, Groom QJ, Kumschick S, Lockwood JL, Robinson TB, Zengeya TA, Richardson DM. NeoBiota 62: 31-54. https://doi.org/10.3897/neobiota.62.52934
This is the R-script and the output of the analyses
Supplementary material 1 from: Bertolino S, Ancillotto L, Bartolommei P, Benassi G, Capizzi D, Gasperini S, Lucchesi M, Mori E, Scillitani L, Sozio G, Falaschi M, Ficetola GF, Cerri J, Genovesi P, Carnevali L, Loy A, Monaco A (2020) A framework for prioritising present and potentially invasive mammal species for a national list. In: Wilson JR, Bacher S, Daehler CC, Groom QJ, Kumschick S, Lockwood JL, Robinson TB, Zengeya TA, Richardson DM. NeoBiota 62: 31-54. https://doi.org/10.3897/neobiota.62.52934
This is the database produced during the research
Supplementary material 1 from: Measey J, Wagener C, Mohanty NP, Baxter-Gilbert J, Pienaar EF (2020) The cost and complexity of assessing impact. In: Wilson JR, Bacher S, Daehler CC, Groom QJ, Kumschick S, Lockwood JL, Robinson TB, Zengeya TA, Richardson DM. NeoBiota 62: 279-299. https://doi.org/10.3897/neobiota.62.52261
Questionnaire
Supplementary material 2 from: Measey J, Wagener C, Mohanty NP, Baxter-Gilbert J, Pienaar EF (2020) The cost and complexity of assessing impact. In: Wilson JR, Bacher S, Daehler CC, Groom QJ, Kumschick S, Lockwood JL, Robinson TB, Zengeya TA, Richardson DM. NeoBiota 62: 279-299. https://doi.org/10.3897/neobiota.62.52261
Amphibian EICAT & SEICAT scores
Supplementary material 1 from: Latombe G, Essl F, McGeoch MA (2020) The effect of cross-boundary management on the trajectory to commonness in biological invasions. In: Wilson JR, Bacher S, Daehler CC, Groom QJ, Kumschick S, Lockwood JL, Robinson TB, Zengeya TA, Richardson DM. NeoBiota 62: 241-267. https://doi.org/10.3897/neobiota.62.52708
Appendix A–E
Supplementary material 3 from: Evans T, Blackburn TM, Jeschke JM, Probert AF, Bacher S (2020) Application of the Socio-Economic Impact Classification for Alien Taxa (SEICAT) to a global assessment of alien bird impacts. In: Wilson JR, Bacher S, Daehler CC, Groom QJ, Kumschick S, Lockwood JL, Robinson TB, Zengeya TA, Richardson DM. NeoBiota 62: 123-142. https://doi.org/10.3897/neobiota.62.51150
Nine additional tables
Supplementary material 2 from: Evans T, Blackburn TM, Jeschke JM, Probert AF, Bacher S (2020) Application of the Socio-Economic Impact Classification for Alien Taxa (SEICAT) to a global assessment of alien bird impacts. In: Wilson JR, Bacher S, Daehler CC, Groom QJ, Kumschick S, Lockwood JL, Robinson TB, Zengeya TA, Richardson DM. NeoBiota 62: 123-142. https://doi.org/10.3897/neobiota.62.51150
Appendix B
Supplementary material 1 from: Evans T, Blackburn TM, Jeschke JM, Probert AF, Bacher S (2020) Application of the Socio-Economic Impact Classification for Alien Taxa (SEICAT) to a global assessment of alien bird impacts. In: Wilson JR, Bacher S, Daehler CC, Groom QJ, Kumschick S, Lockwood JL, Robinson TB, Zengeya TA, Richardson DM. NeoBiota 62: 123-142. https://doi.org/10.3897/neobiota.62.51150
Appendix A
Supplementary material 1 from: Pergl J, Brundu G, Harrower CA, Cardoso AC, Genovesi P, Katsanevakis S, Lozano V, Perglová I, Rabitsch W, Richards G, Roques A, Rorke SL, Scalera R, Schönrogge K, Stewart A, Tricarico E, Tsiamis K, Vannini A, Vilà M, Zenetos A, Roy HE (2020) Applying the Convention on Biological Diversity Pathway Classification to alien species in Europe. In: Wilson JR, Bacher S, Daehler CC, Groom QJ, Kumschick S, Lockwood JL, Robinson TB, Zengeya TA, Richardson DM. NeoBiota 62: 333-363. https://doi.org/10.3897/neobiota.62.53796
Table S1
Supplementary material 5 from: Kumschick S, Wilson JRU, Foxcroft LC (2020) A framework to support alien species regulation: the Risk Analysis for Alien Taxa (RAAT). In: Wilson JR, Bacher S, Daehler CC, Groom QJ, Kumschick S, Lockwood JL, Robinson TB, Zengeya TA, Richardson DM. NeoBiota 62: 213-239. https://doi.org/10.3897/neobiota.62.51031
Guidance regarding the use of the confidence rating (Appendix S5)
Supplementary material 3 from: Bertolino S, Ancillotto L, Bartolommei P, Benassi G, Capizzi D, Gasperini S, Lucchesi M, Mori E, Scillitani L, Sozio G, Falaschi M, Ficetola GF, Cerri J, Genovesi P, Carnevali L, Loy A, Monaco A (2020) A framework for prioritising present and potentially invasive mammal species for a national list. In: Wilson JR, Bacher S, Daehler CC, Groom QJ, Kumschick S, Lockwood JL, Robinson TB, Zengeya TA, Richardson DM. NeoBiota 62: 31-54. https://doi.org/10.3897/neobiota.62.52934
Complete ranking of the species
Supplementary material 3 from: Kumschick S, Wilson JRU, Foxcroft LC (2020) A framework to support alien species regulation: the Risk Analysis for Alien Taxa (RAAT). In: Wilson JR, Bacher S, Daehler CC, Groom QJ, Kumschick S, Lockwood JL, Robinson TB, Zengeya TA, Richardson DM. NeoBiota 62: 213-239. https://doi.org/10.3897/neobiota.62.51031
Example of RAAT (Appendix S3)
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.