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178 results for “Journal Articles”
Data set supporting journal article: Markwitz, C. and Siebicke, L.: "Low-cost eddy covariance: a case study of evapotranspiration over agroforestry in Germany", Atmos. Meas. Tech., 2019
<p>This data set contains evapotranspiration data obtained by a conventional eddy covariance set-up and a low-cost eddy covariance set-up as described in the research article: Markwitz, C. and Siebicke, L.: "Low-cost eddy covariance: a case study of evapotranspiration over agroforestry in Germany", Atmos. Meas. Tech., 2019.</p> <p>The data set contains all necessary data needed to replicate figures and analysis presented in the research article. The data sets are sorted and named according to the figure the data were used for. </p>
Supplementary dataset for journal article "AC Characteristics of Low Ohmic Foil Shunts Influenced by Eddy Currents in the Mounting Body"
<p>This is the complete simulation environment for all simulations and plots done for the paper 'AC Characteristics of Low Ohmic Foil Shunts Influenced by Eddy Currents in the Mounting Body'.</p> <p>The entire simulation is based on fully free software:</p> <ul> <li>Linux</li> <li>GNU Octave</li> <li>Fast Field Solver: Fast Henry</li> </ul> <p>All scripts and models have been copied together in one zip-archive.</p>
Supplemental material to the journal article "Tracing Homopolymers in Oikopleura dioica's mitogenome"
<p>Supplemental material to the journal article “Tracing Homopolymers in <em>Oikopleura dioica</em>’s mitogenome”, consisting of:</p> <ul> <li>The I25 mitochondrial genome (GenBank ID PP146516) and its annotation (not in GenBank)</li> <li>Transcript model sequences used to annotate the genome</li> <li>Nucleotide sequences of<em> cytochrome oxidase I </em>used to compute the tree in Figure 3</li> </ul> <p>Updated on August 6th 2024:</p> <ul> <li>Add raw reads used to assemble the mitogenome.</li> <li>ATP6 gene coordinate corrected (7110 -> 7104) to reach TAA stop codon.</li> </ul>
Research Data for the Journal Article: Metal-free catalytic systems based on imidazolium chloride and strong bases for selective oxidative esterification of furfural to methyl furoate
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Research Data for the Journal Article: Insertion of CO2 to 2-methyl furoate promoted by a cobalt hypercrosslinked polymer catalyst to obtain a monomer of CO2-based biopolyesters
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Research Data for the Journal Article: Hypercrosslinked porous polymer as catalyst for efficient biodiesel production
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Research Data for the Journal Article: Efficient DMF-assisted synthesis of formamides from amines using CO2 catalyzed by heterogeneous metal-free imidazolium-hypercrosslinked polymers
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PID table for the articles of the "Dialektikê. Cahiers de typologie analytique" journal
<p>This table contains the different persistent identifier (PID) related to the digital version of the articles of the <em>Dialektikê. Cahiers de typologie analytique</em> journal of archaeology (ISSN 1147-114X and 1169-0046). These articles are referenced by multiple services:</p> <ul> <li><em>HAL</em> <em>– Hyper Articles en Ligne </em>(<a href="https://hal.archives-ouvertes.fr/search/index/?qa[journalTitle_t][]=%22Cahiers+de+typologie%22">https://hal.archives-ouvertes.fr</a>).</li> <li>The <em>Lithic Types</em> blog (<a href="https://lithictypes.hypotheses.org/">https://lithictypes.hypotheses.org</a>).</li> <li><em>Isidore</em> (<a href="https://isidore.science">https://isidore.science</a>).</li> <li><em>Worldcat</em> (<a href="https://www.worldcat.org)">https://www.worldcat.org)</a>.</li> <li><em>FRANTIQ</em> (<a href="https://catalogue.frantiq.fr">https://catalogue.frantiq.fr</a>)</li> </ul> <p>Each row of the table corresponds to an article and present the following data:</p> <ul> <li><strong>authors</strong>: authors of the article.</li> <li><strong>year</strong>: publication year of the article.</li> <li><strong>doi</strong>: doi of the digital version of the article stored in <em>Zenodo</em>.</li> <li><strong>hdl-hypotheses</strong>: <em>Isidore </em>handle of the reference to the article on the <em>Lithic types</em> blog.</li> <li><strong>oclc-hypotheses</strong>: OCLC unique identifier of the reference to the article on the <em>Lithic types</em> blog.</li> <li><strong>hal</strong>: HAL unique identifier to the reference to the article.</li> <li><strong>hdl-hal</strong>: <em>Isidore</em> handle of the reference to the article in <em>HAL</em>.</li> <li><strong>ark-frantiq</strong>: ark of the reference to the article in <em>FRANTIQ</em>.</li> </ul>
Supporting Information for the Journal Article "Quantum Chemical Data Generation as Fill-In for Reliability Enhancement of Machine-Learning Reaction and Retrosynthesis Planning"
<p>This data set contains all data produced when exploring the Williamson ether synthesis starting from iodoethane and phenol.</p> <p><br> The set is structures as follows:</p> <ul> <li>analysis: Contains the script used to analyze the exploration and the output of said script</li> <li>check_barrier: Contains the output of the manual calculations done to check the barrier of the reaction</li> <li>exploration: Contains the scripts used to initialize and carry out the exploration as well as the two starting structures as XYZ files</li> <li>raw_data: a dump of the MongoDB database with all the data produced during the exploration</li> </ul>
Codes and data related to the article: Renard et al. Floods and Heavy Precipitation at the Global Scale: 100-year Analysis and 180-year Reconstruction. Journal of Geophysical Research - Atmospheres.
<p>This package contains R codes and data related to the article:</p> <p>B. Renard, D. McInerney, S. Westra, M. Leonard, D. Kavetski, M. Thyer and J.-P. Vidal. Floods and Heavy Precipitation at the Global Scale: 100-year Analysis and 180-year Reconstruction. <em>Journal of Geophysical Research - Atmospheres</em>. DOI: <a href="https://doi.org/10.1029/2022JD037908">10.1029/2022JD037908</a></p> <p><strong>Analyses</strong></p> <p>This folder contains the R scripts used to set up models, analyse results and prepare figures. See README file for details.</p> <p><strong>ShinyApp</strong></p> <p>This folder contains an interactive Shiny App to explore the data and the results from the article.</p> <p>An online version can be found at <a href="https://hydroapps.recover.inrae.fr/HEGS-paper">https://hydroapps.recover.inrae.fr/HEGS-paper</a></p> <p> </p>
Survey questionnaires supporting the journal article with doi:10.30924/mjcmi.27.2.6
<p>These questionnaires support the journal article "A fuzzy logic model for evaluating the motivation for high-quality publications: Evidence from a Bulgarian university" with doi:10.30924/mjcmi.27.2.6.</p> <p>They are developed for exploring the motivation for high-quality publications based on fuzzy logic and Vroom's motivation theory.</p> <p>The questionnaires address the internal stakeholders of the university, including the researcher, the department head and the top university management. </p>
Dataset of the Journal article "Energy duty in direct contact membrane distillation of hypersaline brines operating at the water-energy nexus"
<p>This repository contains the Dataset of the Journal article "Energy duty in direct contact membrane distillation of hypersaline brines<br> operating at the water-energy nexus" published on Journal of Membrane Science. </p>
Data set for the journal article: Social life cycle assessment of green methanol and benchmarking against conventional fossil methanol
<p>Single File containing:</p> <ul> <li>Green Methanol Inventories: numerical data as displayed in Figure 4, Main social life cycle inventory data of the green methanol system. </li> <li>Conventional Methanol Inventories: numerical data as displayed in Figure 5, Main social life cycle inventory data of the conventional methanol system. </li> <li>Supplementary information: Diagrams and tables describing teh flowsheet of the simulations used in this work: <ul> <li> <p>Green methanol production process (flowsheet and stream table)</p> </li> <li> <p>Syngas production through Steam Methane Reforming (flowsheet and stream table)</p> </li> <li> <p>Conventional methanol production process (flowsheet and stream table)</p> </li> </ul> </li> </ul>
List of journal articles on vaccination and autism
<p>List of open access journal articles, dois, Altmetric.com IDs and public dates on the topic of vaccination and autism. Article titles and dois were collected from January 2016 to June 2017 using purposive and snowball sampling. Altmetric IDs were collected in April 2018 using the Altmetric Explorer. The data were used to study the use of open access journal articles by the anti-vaccination movement in the social media. </p>
Data for journal article: "Automated precipitation monitoring with the Thies disdrometer: Biases and ways for improvement"
<p>This dataset contains data used for the journal article" Automated precipitation monitoring with the Thies disdrometer: Biases and ways for improvement" submitted to Atmospheric Measurement Techniques.</p>
Superposition for Lambda-Free Higher-Order Logic — Supplementary Material for the Journal Article
<p>We provide the following supplementary material for our <a href="http://matryoshka-project.github.io/pubs/lfhosup_article.pdf">article</a>.</p> <p><strong>Zipperposition</strong></p> <p>Compilation instructions for Zipperposition, in particular instructions for compilation for <a href="https://www.starexec.org/">StarExec</a>, can also be found in the <a href="https://github.com/sneeuwballen/zipperposition#starexec">Zipperposition readme</a>. We used OCaml 4.07.0, branch <code>lmcs2020</code>, commit <a href="https://github.com/sneeuwballen/zipperposition/tree/2031e216c1941acd76187882a073e8f1e53383f2">2031e216c1941acd76187882a073e8f1e53383f2</a></p> <p><strong>Problems</strong></p> <p>We used the following first-order (TFF) and the higher-order (THF) <a href="http://www.cs.miami.edu/~tptp/">TPTP (v7.3.0) problems</a> for the evaluation: <a href="https://zenodo.org/record/3992618/files/list_TFF.txt">TFF problem list</a> <a href="https://zenodo.org/record/3992618/files/list_THF.txt"> THF problem list</a>. These lists were obtained by excluding all problems that contain arithmetic, the symbols <code>(@@+)</code>, <code>(@@-)</code>, <code>(@+)</code>, <code>(@-)</code>, <code>(&)</code>, or tuples, as well as the <code>SYN000</code> problems, which are only intended to test the parser, and problems whose clausal normal form takes longer than 15s to compute or falls outside the lambda-free fragment. The following archive contains instructions on how the benchmarks were selected: <a href="https://zenodo.org/record/3992618/files/benchmark_selection.zip">Benchmark selection</a></p> <p>Note that Zipperposition is not aware that our calculi are complete for this fragment and it will always report "GaveUp" instead of "CounterSatisfiable" if the calculus saturates.</p> <p>The selection of TPTP problems and the problems generated by Isabelle/Sledgehammer can be downloaded here: <a href="https://zenodo.org/record/3992618/files/benchmarks.zip">Benchmarks</a></p> <p><strong>Run scripts</strong></p> <p>We used the following run scripts on StarExec. This archive also contains the Zipperposition binary, compiled for StarExec: <a href="https://zenodo.org/record/3992618/files/run_scripts.zip">StarExec run scripts</a></p> <p>The scripts use the following command-line options for Zipperposition</p> <ul> <li>First-order mode:<br> <code>./zipperposition.exe --mode=fo-complete-basic</code></li> <li>Applicative encoding mode (intensional):<br> <code>./zipperposition.exe --mode=fo-complete-basic --app-encode=intensional</code></li> <li>Applicative encoding mode (extensional):<br> <code>./zipperposition.exe --mode=fo-complete-basic --app-encode=extensional</code></li> <li>Nonpurifying intensional calculus:<br> <code>./zipperposition.exe --mode=lambda-free-intensional</code></li> <li>Nonpurifying extensional calculus:<br> <code>./zipperposition.exe --mode=lambda-free-extensional</code></li> <li>Purifying intensional calculus:<br> <code>./zipperposition.exe --mode=lambda-free-purify-intensional</code></li> <li>Purifying extensional calculus:<br> <code>./zipperposition.exe --mode=lambda-free-purify-extensional</code></li> </ul> <p>As additional command line arguments, we provided the problem's filename, the order (<code>--ord=lambdafree_rpo</code> or <code>--ord lambdafree_kbo</code> or <code>--ord epo</code>), and the following parameters for heuristics that were obtained by optimizing the first-order mode in preliminary experiments:</p> <pre>--kbo-weight-fun=modarity \ -q "7|prefer-sos|pnrefined(2,1,1,1,2,2,2)" \ -q "4|prefer-short-trail|pnrefined(1,1,1,2,2,2,0.5)" \ -q "1|prefer-processed|fifo" \ -q "7|prefer-ground|conjecture-relative-var(1,l,f)" \ -q "6|prefer-goals|conjecture-relative-var(1,s,f)" \ --select=e-selection7 </pre> <p>On Starexec, we chose a wallclock timeout of 360 s, a CPU timeout of 180 s, and a memory limit of 128 GB. StarExec's machine specifications are:</p> <pre>Intel(R) Xeon(R) CPU E5-2609 0 @ 2.40GHz (2393 MHZ) 10240 KB Cache 263932744 kB main memory OS: CentOS Linux release 7.7.1908 (Core) kernel: 3.10.0-1062.4.3.el7.x86_64 </pre> <p><strong>Results</strong></p> <p>Download the raw output of the evaluation and the .csv files created by StarExec here:</p> <ul> <li><a href="https://zenodo.org/record/3992618/files/results_tff.zip">Raw evaluation output TFF</a></li> <li><a href="https://zenodo.org/record/3992618/files/results_sh256.zip">Raw evaluation output SH256</a></li> <li><a href="https://zenodo.org/record/3992618/files/results_sh16.zip">Raw evaluation output SH16</a></li> <li><a href="https://zenodo.org/record/3992618/files/results_thf.zip">Raw evaluation output THF</a></li> <li><a href="https://zenodo.org/record/3992618/files/results_csv.zip">Evaluation results as CSV file + script to compile the statistics</a></li> </ul> <p><strong>Examples</strong></p> <p>We tested the examples given in our paper in Zipperposition. Here are the problem files we used. Some are in TPTP format (.p) and some are in Zipperposition format (.zf).</p> <ul> <li><a href="https://zenodo.org/record/3992618/files/example_varcond.zf">Example 3.3</a></li> <li><a href="https://zenodo.org/record/3992618/files/example_posext.zf">Example 3.4</a></li> <li><a href="https://zenodo.org/record/3992618/files/example_supatvars_rpo.zf">Example 3.5</a></li> <li><a href="https://zenodo.org/record/3992618/files/example_negext.zf">Example 3.6</a></li> <li><a href="https://zenodo.org/record/3992618/files/example_add_equiv_defs.p">Example 3.7</a></li> </ul>
Dataset for the submission entitled: Journal article publishing in the social sciences and humanities: a comparison of Web of Science coverage for five European countries
<p>Dataset for the manuscript submission entitled: Journal article publishing in the social sciences and humanities: a comparison of Web of Science coverage for five European countries.</p>
Data archive for the peer-reviewed journal article "Detailed characterization of the CAPS single scattering albedo monitor (CAPS PMssa) as a field-deployable instrument for measuring aerosol light absorption with the extinction-minus-scattering method"
<p>Data archive accompanying the peer-reviewed journal article "Detailed characterization of the CAPS single scattering albedo monitor (CAPS PMssa) as a field-deployable instrument for measuring aerosol light absorption with the extinction-minus-scattering method". In 2020 this article was accepted for publication in the journal <em>Atmospheric Measurement Techniques</em>. Data are uploaded in the form of ascii text files, Igor Pro experiment files (.pxp), and Jupyter notebook files. In addition, a Jupyter notebook file is included containing an implementation of the error model used in the paper.</p>
Data supplementing the article: Schultz, N.M., Lawrence P.J, Lee X., Global satellite data highlights the diurnal asymmetry of the surface temperature response to deforestation. Journal of Geophysical Research - Biogeosciences
<p>These data supplement the article: Schultz, N.M., Lawrence P.J, Lee X. Global satellite data highlights the diurnal asymmetry of the surface temperature response to deforestation, under review at the Journal of Geophysical Research - Biogeosciences.</p> <p>contact: Natalie M. Schultz, natalie.schultz@yale.edu</p> <p>Below are descriptions of the data files included here:</p> <p><br> (1) Global LST data: globalLST_Forest_Open.YYYY.nc [2003-2013]</p> <p>- DayLST1/NightLST1 and DayLST2/NightLST2 are the final (after the DEM correction) LST values for forest, and open land cover classes, respectively.<br> - Count variables show the number of pixels of each land cover class in each 0.5 degree grid<br> - The average elevation of each class is given by the DEM1 and DEM2 vars<br> - The DEM correction is the dLSTdDEM vars</p> <p>(2) Global fluxes data: globalFluxes_Forest_Open.YYYY.nc [2003-2013]<br> - Again, forest class = var1, open class = var2<br> - SWRABS is absorbed solar radiation<br> - LE is the latent heat flux<br> - HP is the heating potential term, as defined in the manuscript<br> - As described for the LST data, class pixel counts and DEM data are included</p> <p>(3) climzones3.nc<br> - The delineation of the three climate zones defined in this paper</p> <p>(4) MERRA inversion data: MERRA_11yr_TS_T10M.mat [2003-2013]<br> - 11 years of daily 1am local data averaged over 8-day intervals for 2003-2013<br> - TS = surface temperature<br> - T10M = 10M air temperature (above d)</p> <p> </p> <p> </p>
Data supplementing the article "Assessing ecological status with diatoms DNA metabarcoding : scaling-up on a WFD monitoring network (Mayotte island, France)" V. Vasselon, F. Rimet, K. Tapolczai, A. Bouchez submitted to Ecological Indicators journal
<p>These data supplement the article"Assessing ecological status with DNA metabarcoding or microscopy? Comparison using benthic diatoms in tropical rivers" V. Vasselon, F. Rimet, K. Tapolczai, A. Bouchez submitted to Ecological Indicators journal.</p> <p>The directory contains the following files:</p> <p><strong>80 PGM sequencing libraries (raw data, fastq files).rar </strong>- contains the 80 fastq files provided by the sequencing platform with demultiplexed DNA reads (raw data prior any bioinformatics treatments).</p> <p><strong>80 fastq files information.xlsx</strong> - contains the information relative to the 80 samples including: the ID used in Mothur analyses (corresponding to the name of the fastq files), the sample name, the sampling site code, the name of the river, the monitoring network to which rivers belong, the year of sampling and the GPS coordinates of sampling sites.</p> <p><strong>OTU (95 percent of similarity) list of 80 Mayotte samples.xlsx</strong> - contains the final OTU list obtained after applying all the bioinformatics treatments (trimming, clustering,...): OTUs created at 95% of similarity, the number of DNA reads per sample was normalized at 5710 reads (the smallest values obtained in one sample). A DNA representative sequence and the taxonomic assignment determined using Mothur (using classify.otu command) are also provided for each OTU.</p>
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