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Fig. 5 in Molecular cloning, characterization and expression analysis of LoTPS2 and LoTPS4 involved in floral scent formation in oriental hybrid Lilium variety 'Siberia'
Fig. 5. Relative gene expression analysis of LoTPS2 and LoTPS4 in floraland vegetative tissues of Lilium 'Siberia' (a) relative expression levels of LoTPS2 in different tissues of Lilium 'Siberia' (b) Relative expression levels of LoTPS4 in different tissues of Lilium 'Siberia' analyzed by qRT-PCR. (c, d) Relative expression levels of LoTPS2 and LoTPS4 in full-bloom flowers of different Lilium species. GAPDH was used as an internal control. The highest expression level was set as 1 (100%). Lon: Longiflorum; Bru: Brunello; Sib: Siberia; Aca: Acapulco; Sor: Sorbonne; Man: Manissa. Data are presented as the mean ± SEM (n = 4).
Fig. 1 in Molecular cloning, characterization and expression analysis of LoTPS2 and LoTPS4 involved in floral scent formation in oriental hybrid Lilium variety 'Siberia'
Fig. 1. (a) Alignment of the amino acid sequences of LoTPS2 and LoTPS4, with AdAFS1 from Actinidia deliciosa (FJ265785) and (+)-limonene synthase (Q8L5K3) from Citrus limon. The protein sequences were aligned using ClustalX 2.1 and edited with GeneDoc. RRX8W motifs were present in LoTPS4 and (+)-limonene synthase but were missing in both LoTPS2 and AdAFS1. The conserved RRX8W, DDXXD, and RxR domains are underlined. (b) N-terminal sequence alignment of TPS-f clade terpene synthases. AdAFS1; CbLIS2 (C. breweri, AAD19840); CbLIS (C. breweri, AAC49395); CcLIS (Clarkia concinna, AAD19839). The CDIS (conifer diterpene internal sequence) is indicated by a dotted line. Dashes indicate gaps inserted for optimal alignment. (c) Phylogenetic analysis of LoTPS2 and LoTPS4 from Lilium 'Siberia' with amino acid sequences of other selected terpene synthases. The alignment was performed using ClustalX 2.1, and the tree was built via the neighborjoining method using the MEGA 6 program and iTOL (http://itol.embl.de/). The dot size at the branches of the tree shows bootstrap values. Accession numbers are given in a Supplementary Table 1.
Data from: Papilio butterfly vs. hawkmoth pollination explains floral syndrome dichotomy in a clade of Lilium
Open the record for dataset details and reuse information.
Seed and fruit set in Lilium pomponium
<p>Seed set in supplementally hand pollinated flowers and open pollinated flowers, and fruit set in self pollinated flowers</p>
Fig. 1 in Typification of Lilium lancifolium
Fig. 1. Thunberg's collection No. 8139 from Japan.
Figure 5 from: Compton JA, Sytin AK (2023) The History and introduction of the Daurian Lily Lilium pensylvanicum and the new combination L. pensylvanicum var. alpinum (Liliaceae). PhytoKeys 236: 215-247. https://doi.org/10.3897/phytokeys.236.111741
Figure 5 Watercolour of L. pensylvanicum as 'Lilium angustifolium, flore rubro singulari' in the Appendix to Mark Catesby's The Natural History of Carolina, Florida and the Bahama Islands (Catesby 1747: App. t. 8).
Figure 2 from: Compton JA, Sytin AK (2023) The History and introduction of the Daurian Lily Lilium pensylvanicum and the new combination L. pensylvanicum var. alpinum (Liliaceae). PhytoKeys 236: 215-247. https://doi.org/10.3897/phytokeys.236.111741
Figure 2 Moscow University specimen MW0044033 of L. pensylvanicum bearing 'In horto Fintelmanniano' label.
Figure 1 from: Compton JA, Sytin AK (2023) The History and introduction of the Daurian Lily Lilium pensylvanicum and the new combination L. pensylvanicum var. alpinum (Liliaceae). PhytoKeys 236: 215-247. https://doi.org/10.3897/phytokeys.236.111741
Figure 1 Sydenham Edwards illustration of Lilium pensylvanicum in Curtis's Botanical Magazine 22 t. 872 (1805).
Figure 8 from: Compton JA, Sytin AK (2023) The History and introduction of the Daurian Lily Lilium pensylvanicum and the new combination L. pensylvanicum var. alpinum (Liliaceae). PhytoKeys 236: 215-247. https://doi.org/10.3897/phytokeys.236.111741
Figure 8 Lectotype specimen N.Shestunov 59 of Lilium dauricum var. alpinum LE01075424 designated by Compton & Sytin, this paper.
Figure 7 from: Compton JA, Sytin AK (2023) The History and introduction of the Daurian Lily Lilium pensylvanicum and the new combination L. pensylvanicum var. alpinum (Liliaceae). PhytoKeys 236: 215-247. https://doi.org/10.3897/phytokeys.236.111741
Figure 7 Peter Simon Pallas's specimens of L. pensylvanicum from Siberia that may have been in Aylmer Bourke Lambert's Herbarium BM000551418.
Fig. 2 in Typification of Lilium jankae A. Kern. and Lilium martagon var. cattaniae Vis.
Fig. 2. – Lectotype of Lilium martagon var. cattaniae Vis. [specimen on the left side]. [Maria de Cattani s.n., PAD] [© Erbario Patavinum, Università degli Studi di Padova. Reproduced with permission]
Lilium martagon L. (BR0000011407911)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Figure 3. Bayesian dating tree inference performed with cytochrome b in PhylOgeOgraphy and pOtential distributiOn OF Sturnira lilium and S. giannae (ChirOptera: PhyllOstOmidae) With range eXtensiOn FOr S. giannae in the CerradO and Pantanal biOmes
Figure 3. Bayesian dating tree inference performed with cytochrome b gene for Sturnira. Numbers are the nodes ages and values of posterior probability are represented by circles in black (pp ≥ 0.9) and white (pp ≥ 0.8 <0.9). See the list of haplotypes in Table S1 and Fig. S1.
Figure 5 in PhylOgeOgraphy and pOtential distributiOn OF Sturnira lilium and S. giannae (ChirOptera: PhyllOstOmidae) With range eXtensiOn FOr S. giannae in the CerradO and Pantanal biOmes
Figure 5. Maps of South America with the potential distribution (between years 1970–2000) of S. giannae and S. lilium. Unsuitable (0 – MTP value), moderate suitability (MTP value – 0.50), high suitability (0.50–0.75), and very high suitability (0.75–1.00).
Figure 1 in PhylOgeOgraphy and pOtential distributiOn OF Sturnira lilium and S. giannae (ChirOptera: PhyllOstOmidae) With range eXtensiOn FOr S. giannae in the CerradO and Pantanal biOmes
Figure 1. Skull of Sturnira lilium (MN 82216) showing the (A) dorsal view, (B) ventral view, (C) lateral view, and (D) the mandible in lateral view, with the measurements used in this study.
FIGURE 2 in Accommodating Nomocharis in Lilium (Liliaceae)
FIGURE 2. Field pictures of western China Lilium: a–c, L. pardanthinum; d–f, L. saluenense.
TABLE 2 in Lilium shenxianjuense (Liliaceae), a new species from Zhejiang, China
<p><b>TABLE 2</b>. Morphological comparison of <i>Lilium shenxianjuense</i> with <i>L. concolor</i> and <i>L. lancifolium</i>.</p><table><tbody><tr><th><b>Characters</b></th><th><i>Lilium shenxianjuense</i></th><th><i>L. concolor</i></th><th><i>L. lancifolium</i></th></tr></tbody><tbody><tr><th>Habitat</th><td>cliffs, 550–810 m</td><td>hillsides, grasslands, roadsides and brushwood, 350–2000 m</td><td>hillsides, grasslands, roadsides, brushwood and near dwellings, 400–2500 m</td></tr><tr><th>Stems</th><td>dark purple, densely papillose, axil without bulblets</td><td>occasionally tinged purple, papillose, axil without bulblets</td><td>streaked with purple, minutely white woolly, axil with bulblets</td></tr><tr><th>Leaves</th><td>linear, 20–100 × 3–5 mm, margin and adaxially papillose, with midveins abaxially papillose</td><td>linear, 30–70 × 2–10 mm, veins and margin papillose</td><td>oblong-lanceolate to linear-lanceolate, 65–90 × 10–18 mm, margin papillose</td></tr><tr><th>Inflorescences</th><td>2 bracts at pedicle base, raceme with 4–10 flowers, erect or ascending</td><td>1 bract at pedicle base, raceme with 1–5 flowers, erect or ascending</td><td>1 bract at pedicle base, raceme with 3–6(20) flowers, horizontal to nodding</td></tr><tr><th>Flower</th><td>campanulate, red-orange, unspotted</td><td>campanulate, deep red, unspotted</td><td>not campanulate, reflexed, vermilion, with dark purple spots</td></tr><tr><th>Tepals</th><td>outer 3 linear or linear-lanceolate, 48–60 × 8–11 mm; inner 3 narrowly elliptic, 48–60 × 12–15 mm</td><td>oblong-lanceolate, 22–40 × 4–7 mm</td><td>outer 3 lanceolate to oblong-lanceolate, 60–100 × 10–20 mm; inner 3 broadly lanceolate to narrowly ovate, slightly wider</td></tr><tr><th>Nectary</th><td>glabrous</td><td>margin papillose</td><td>papillose and with fimbriate projections on both surfaces</td></tr><tr><th>Anther</th><td>lunate, ca. 10 mm long</td><td>long-oblong, ca. 7 mm long</td><td>long-oblong, ca. 20 mm long</td></tr><tr><th>Style vs. ovary</th><td>± 2×</td><td>± 1×</td><td>± 3×</td></tr></tbody></table>
TABLE 3 in Lilium shenxianjuense (Liliaceae), a new species from Zhejiang, China
<p><b>TABLE 3.</b> Plastome characteristics of Lilium shenxianjuense.</p><table><tbody><tr><th>Plastome characteristic</th></tr></tbody><tbody><tr><th>Size in bp</th><td>152,646</td></tr><tr><th>Large single-copy region size in bp (%)</th><td>82,046 (53.74)</td></tr><tr><th>Small single-copy region size in bp (%)</th><td>17,616 (11.54)</td></tr><tr><th>Inverted repeat (IR) length in bp (%)</th><td>26,492 (17.36)</td></tr><tr><th>Overall G + C content in %</th><td>37.03</td></tr><tr><th>Number of genes</th><td>131</td></tr><tr><th>Number of protein-coding genes</th><td>85</td></tr><tr><th>Number of tRNA genes</th><td>38</td></tr><tr><th>Number of rRNA genes</th><td>8</td></tr><tr><th>Number of genes duplicated in the IR</th><td>18</td></tr></tbody></table>
TABLE 4 in Lilium shenxianjuense (Liliaceae), a new species from Zhejiang, China
<p><b>TABLE 4.</b> Genes contained in the <i>Lilium shenxianjuense</i> plastome. aGene with one intron. bGene with two introns. cGenes located in the inverted repeat regions.</p><table><tbody><tr><th>Category</th><th>Gene group</th><th>Gene name</th></tr></tbody><tbody><tr><th></th><td>Large subunit ribosomal proteins</td><td><i>rpl2</i> <i>a</i>, <i>c</i>, <i>rpl14</i>, <i>rpl16</i> <i>a</i>, <i>rpl20</i>, <i>rpl22</i>, <i>rpl23</i> <i>c</i>, <i>rpl30</i>, <i>rpl32</i>, <i>rpl33</i>, <i>rpl36</i></td></tr><tr><th></th><td>Small subunit ribosomal proteins</td><td><i>rps2</i>, <i>rps3</i>, <i>rps4</i>, <i>rps7</i> <i>c</i>, <i>rps8</i>, <i>rps11</i>, <i>rps12</i> <i>b</i>, <i>c</i>, <i>rps14</i>, <i>rps15</i>, <i>rps16</i> <i>a</i>, <i>rps18</i>, <i>rps19</i></td></tr><tr><th></th><td>RNA polymerase subunits</td><td><i>rpoA</i>, <i>rpoB</i>, <i>rpoC1</i> <i>a</i>, <i>rpoC2</i></td></tr><tr><th>Self-replication</th><td>Ribosomal RNAs</td><td><i>rrn4.5</i> <i>c</i>, <i>rrn5</i> <i>c</i>, <i>rrn16</i> <i>c</i>, <i>rrn23</i> <i>c</i></td></tr><tr><th></th><td></td><td><i>trnA-UGCa</i>, <i>c</i>, <i>trnC-GCA</i>, <i>trnD-GUC</i>, <i>trnE-UUC</i>, <i>trnF-GAA</i>, <i>trnG-GCC</i>, <i><i>trnG-UCCa</i>, <i>trnH-GUGc</i>, <i>trnI-CAUc</i>, <i>trnI-GAUa</i>, <i>c</i>, <i>trnK-UUUa</i>, <i>trnL-CAAc</i>, <i>trnL-UAAa</i>,</i></td></tr><tr><th></th><td>transfer RNAs</td><td><i>trnL-UAG</i>, <i>trnfM-CAU</i>, <i>trnM-CAU</i>, <i>trnN-GUUc</i>, <i>trnP-UGG</i>, <i>trnQ-UUG</i>, <i><i>trnR-ACGc</i>, <i>trnR-UCU</i>, <i>trnS-GCU</i>, <i>trnS-GGA</i>, <i>trnS-UGA</i>, <i>trnT-GGU</i>, <i>trnT-UGU</i>, <i><i>trnV-GACc</i>, <i>trnV-UACa</i>, <i>trnW-CCA</i>, <i>trnY-GUA</i></i></i></td></tr><tr><th></th><td>photosystem I</td><td><i>psaA</i>, <i>psaB</i>, <i>psaC</i>, <i>psaI</i>, <i>psaJ</i></td></tr><tr><th></th><td>photosystem II</td><td><i>psbA</i>, <i>psbB</i>, <i>psbC</i>, <i>psbD</i>, <i>psbE</i>, <i>psbF</i>, <i>psbH</i>, <i>psbI</i>, <i>psbJ</i>, <i>psbK</i>, <i>psbL</i>, <i>psbM</i>, <i>psbN</i>, <i>psbT</i>, <i>psbZ</i></td></tr><tr><th></th><td>NADH dehydrogenase</td><td><i>ndhAa</i>, <i>ndhBa</i>, <i>c</i>, <i>ndhC</i>, <i>ndhD</i>, <i>ndhE</i>, <i>ndhF</i>, <i>ndhG</i>, <i>ndhH</i>, <i>ndhI</i>, <i>ndhJ</i>, <i>ndhK</i></td></tr><tr><th>Photosynthesis</th><td>cytochrome b/f complex</td><td><i>petA</i>, <i>petBa</i>, <i>petDa</i>, <i>petG</i>, <i>petL</i>, <i>petN</i></td></tr><tr><th></th><td>ATP synthase</td><td><i>atpA</i>, <i>atpB</i>, <i>atpE</i>, <i>atpFa</i>, <i>atpH</i>, <i>atpI</i></td></tr><tr><th></th><td>ATP-dependent protease subunit p</td><td><i>clpPb</i></td></tr><tr><th></th><td>large subunit of rubisco</td><td><i>rbcL</i></td></tr><tr><th></th><td>maturase K</td><td><i>matK</i></td></tr><tr><th></th><td>envelope membrane protein</td><td><i>cemA</i></td></tr><tr><th>Other genes</th><td>subunit of acetyl-CoA-carboxylase</td><td><i>accD</i></td></tr><tr><th></th><td>c-type cytochrome synthesis gene</td><td><i>ccsA</i></td></tr><tr><th></th><td>hypothetical chloroplast reading frames</td><td><i>ycf1</i>, <i>ycf2</i> <i>c</i>, <i>ycf3</i> <i>b</i>, ycf4</td></tr></tbody></table>
TABLE 1 in Lilium shenxianjuense (Liliaceae), a new species from Zhejiang, China
<p><b>TABLE 1</b>. Plastome sequences of Liliaceae download from GenBank.</p><table><tbody><tr><th></th><th><b>Species</b></th><th><b>GenBank Accession</b></th></tr></tbody><tbody><tr><th><b>Ingroup</b></th><td><i>Lilium brownii</i></td><td>MK493294.1</td></tr><tr><th></th><td><i>Lilium brownii</i> var. <i>viridulum</i></td><td>NC_050268.1</td></tr><tr><th></th><td><i>Lilium japonicum</i></td><td>NC_049018.1</td></tr><tr><th></th><td><i>Lilium speciosum</i> var. <i>gloriosoides</i></td><td>NC_060551.1</td></tr><tr><th></th><td>Lilium pensylvanicum</td><td>NC_043876.1</td></tr><tr><th></th><td>Lilium anhuiense</td><td>NC_060549.1</td></tr><tr><th></th><td>Lilium leucanthum</td><td>NC_035590.1</td></tr><tr><th></th><td>Lilium longiflorum</td><td>NC_063560.1</td></tr><tr><th></th><td>Lilium formosanum</td><td>NC_042398.1</td></tr><tr><th></th><td>Lilium regale</td><td>NC_052790.1</td></tr><tr><th></th><td>Lilium sargentiae</td><td>NC_052791.1</td></tr><tr><th></th><td>Lilium sulphureum</td><td>NC_052792.1</td></tr><tr><th></th><td>Lilium bulbiferum</td><td>NC_037517.1</td></tr><tr><th></th><td>Lilium distichum</td><td>NC_029937.1</td></tr><tr><th></th><td><i>Lilium hansonii</i></td><td>MW900174.1</td></tr><tr><th></th><td><i>Lilium martagon</i> var. <i>pilosiusculum</i></td><td>NC_039162.1</td></tr><tr><th></th><td>Lilium pardalinum</td><td>MH029495.1</td></tr><tr><th></th><td>Lilium superbum</td><td>NC_026787.1</td></tr><tr><th></th><td>Lilium washingtonianum</td><td>NC_037699.1</td></tr><tr><th></th><td><i>Lilium davidii</i></td><td>NC_060550.1</td></tr><tr><th></th><td><i>Lilium davidii</i> var. <i>unicolor</i></td><td>MK954110.1</td></tr><tr><th></th><td>Lilium duchartrei</td><td>NC_035591.1</td></tr><tr><th></th><td>Lilium henryi</td><td>NC_035570.1</td></tr><tr><th></th><td>Lilium lancifolium</td><td>MW465411.1</td></tr><tr><th></th><td><i>Lilium lankongense</i></td><td>NC_062580.1</td></tr><tr><th></th><td><i>Lilium leichtlinii</i> var. <i>maximowiczii</i></td><td>MW770216.1</td></tr><tr><th></th><td>Lilium rosthornii</td><td>NC_054295.1</td></tr><tr><th></th><td>Lilium amabile</td><td>NC_035988.1</td></tr><tr><th></th><td>Lilium callosum</td><td>NC_035989.1</td></tr><tr><th></th><td>Lilium cernuum</td><td>NC_034840.1</td></tr><tr><th></th><td><i>Lilium concolor</i></td><td>NC_058994.1</td></tr><tr><th></th><td><i>Lilium concolor</i> var. <i>pulchellum</i></td><td>MZ751064.1</td></tr><tr><th></th><td>Lilium pumilum</td><td>NC_050269.1</td></tr><tr><th></th><td>Lilium fargesii</td><td>NC_033908.1</td></tr><tr><th></th><td>Lilium xanthellum</td><td>MN745202.1</td></tr><tr><th></th><td>Lilium amoenum</td><td>NC_053564.1</td></tr><tr><th></th><td>Lilium bakerianum</td><td>NC_035592.1</td></tr><tr><th></th><td>Lilium nanum</td><td>MK493300.1</td></tr><tr><th></th><td><i>Lilium nepalense</i></td><td>MW853784.1</td></tr><tr><th></th><td><i>Lilium primulinum</i> var. <i>ochraceum</i></td><td>KY748298.1</td></tr><tr><th></th><td>Lilium souliei</td><td>ON409199.1</td></tr><tr><th></th><td>Lilium taliense</td><td>NC_034370.1</td></tr><tr><th></th><td>Lilium anhuiense</td><td>NC_060549.1</td></tr><tr><th></th><td>Lilium matangense</td><td>MN745201.1</td></tr><tr><th></th><td>Lilium apertum</td><td>ON381174.1</td></tr><tr><th></th><td>Lilium gongshanense</td><td>NC_052787.1</td></tr><tr><th></th><td>Lilium lophophorum</td><td>MK493298.1</td></tr><tr><th></th><td>Lilium henricii</td><td>NC_039436.1</td></tr><tr><th></th><td>Lilium meleagrinum</td><td>NC_052788.1</td></tr><tr><th></th><td><i>Lilium pardanthinum</i></td><td>MG704135.1</td></tr><tr><th><b>Outgroup</b></th><td>Cardiocrinum cathayanum</td><td>MK104128.1</td></tr><tr><th></th><td>Cardiocrinum cordatum</td><td>MT261152.1</td></tr><tr><th></th><td>Cardiocrinum giganteum</td><td>NC_033896.1</td></tr><tr><th></th><td>Clintonia udensis</td><td>NC_057098.1</td></tr><tr><th></th><td>Fritillaria cirrhosa</td><td>NC_024728.1</td></tr><tr><th></th><td>Fritillaria davidii</td><td>MN810984.1</td></tr><tr><th></th><td>Fritillaria delavayi</td><td>MN480806.1</td></tr><tr><th></th><td>Fritillaria karelinii</td><td>NC_037213.1</td></tr><tr><th></th><td>Fritillaria maximowiczii</td><td>MN810994.1</td></tr><tr><th></th><td>Fritillaria thunbergii</td><td>NC_034368.1</td></tr><tr><th></th><td>Fritillaria unibracteata</td><td>NC_044629.1</td></tr><tr><th></th><td>Gagea triflora</td><td>MT261157.1</td></tr><tr><th></th><td>Notholirion bulbuliferum</td><td>NC_046464.1</td></tr><tr><th></th><td>Notholirion campanulatum</td><td>NC_058199.1</td></tr><tr><th></th><td>Notholirion thomsonianum</td><td>NC_061550.1</td></tr><tr><th></th><td>Tulipa iliensis</td><td>MW077740.1</td></tr><tr><th></th><td><i>Tulipa patens</i></td><td>MT327740.1</td></tr></tbody></table>
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Allen Brain Atlas
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