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ShareScore release 0.9.0
Dataset results
167 results for “Metagenomic DNA”
zenodo28/100
Supplementary material 1 from: Sickel W, Zizka V, Scherges A, Bourlat SJ, Dieker P (2023) Abundance estimation with DNA metabarcoding – recent advancements for terrestrial arthropods. Metabarcoding and Metagenomics 7: e112290. https://doi.org/10.3897/mbmg.7.112290
Background information
opencc-zeroNov 2023View details →
zenodo28/100
Supplementary material 3 from: Sickel W, Zizka V, Scherges A, Bourlat SJ, Dieker P (2023) Abundance estimation with DNA metabarcoding – recent advancements for terrestrial arthropods. Metabarcoding and Metagenomics 7: e112290. https://doi.org/10.3897/mbmg.7.112290
Categories assessed in the literature review
opencc-zeroNov 2023View details →
zenodo28/100
Supplementary material 2 from: Schallenberg LA, Thomson-Laing G, Kelly D, Pearman JK, Howarth JD, Vandergoes MJ, Puddick J, Fitzsimons S, Rees A, Wood SA (2023) Insights into the ecological impact of trout introduction in an oligotrophic lake using sedimentary environmental DNA. Metabarcoding and Metagenomics 7: e111467. https://doi.org/10.3897/mbmg.7.111467
Supplementary data 2
opencc-zeroDec 2023View details →
zenodo28/100
Supplementary material 1 from: Schallenberg LA, Thomson-Laing G, Kelly D, Pearman JK, Howarth JD, Vandergoes MJ, Puddick J, Fitzsimons S, Rees A, Wood SA (2023) Insights into the ecological impact of trout introduction in an oligotrophic lake using sedimentary environmental DNA. Metabarcoding and Metagenomics 7: e111467. https://doi.org/10.3897/mbmg.7.111467
Supplementary data 1
opencc-zeroDec 2023View details →
zenodo28/100
Supplementary material 2 from: Alter SE, Arroyave J (2022) Environmental DNA metabarcoding is a promising method for assaying fish diversity in cenotes of the Yucatán Peninsula, Mexico. Metabarcoding and Metagenomics 6: e89857. https://doi.org/10.3897/mbmg.6.89857
OTU (Operational Taxonomic Unit) table
opencc-zeroOct 2022View details →
zenodo28/100
Supplementary material 1 from: Alter SE, Arroyave J (2022) Environmental DNA metabarcoding is a promising method for assaying fish diversity in cenotes of the Yucatán Peninsula, Mexico. Metabarcoding and Metagenomics 6: e89857. https://doi.org/10.3897/mbmg.6.89857
Summary results from initial eDNA raw data processing
opencc-zeroOct 2022View details →
zenodo28/100
Nanomotif: Identification and Exploitation of DNA Methylation Motifs in Metagenomes using Oxford Nanopore Sequencing
Open the record for dataset details and reuse information.
opencc-by-4.0Apr 2024View details →
zenodo28/100
Supplementary material 2 from: Sildever S, Laas P, Kolesova N, Lips I, Lips U, Nagai S (2021) Plankton biodiversity and species co-occurrence based on environmental DNA – a multiple marker study. Metabarcoding and Metagenomics 5: e72371. https://doi.org/10.3897/mbmg.5.72371
Supplementary tables
opencc-zeroNov 2021View details →
zenodo28/100
Supplementary material 1 from: Sildever S, Laas P, Kolesova N, Lips I, Lips U, Nagai S (2021) Plankton biodiversity and species co-occurrence based on environmental DNA – a multiple marker study. Metabarcoding and Metagenomics 5: e72371. https://doi.org/10.3897/mbmg.5.72371
Supplementary figures
opencc-zeroNov 2021View details →
zenodo28/100
Supplementary material 1 from: Radulovici AE, Vieira PE, Duarte S, Teixeira MAL, Borges LMS, Deagle BE, Majaneva S, Redmond N, Schultz JA, Costa FO (2021) Revision and annotation of DNA barcode records for marine invertebrates: report of the 8 th iBOL conference hackathon. Metabarcoding and Metagenomics 5: e67862. https://doi.org/10.3897/mbmg.5.67862
Figure S1 and Tables S1–S10
opencc-zeroDec 2021View details →
zenodo28/100
Supplementary material 2 from: Boukhdoud L, Saliba C, Parker LD, McInerney NR, Kahale R, Saliba I, Maldonado JE, Kharrat MBD (2021) Using DNA metabarcoding to decipher the diet plant component of mammals from the Eastern Mediterranean region. Metabarcoding and Metagenomics 5: e70107. https://doi.org/10.3897/mbmg.5.70107
Appendix 2
opencc-zeroDec 2021View details →
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Supplementary material 1 from: Boukhdoud L, Saliba C, Parker LD, McInerney NR, Kahale R, Saliba I, Maldonado JE, Kharrat MBD (2021) Using DNA metabarcoding to decipher the diet plant component of mammals from the Eastern Mediterranean region. Metabarcoding and Metagenomics 5: e70107. https://doi.org/10.3897/mbmg.5.70107
Appendix 1
opencc-zeroDec 2021View details →
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Supplementary material 1 from: Leite BR, Vieira PE, Troncoso JS, Costa FO (2021) Comparing species detection success between molecular markers in DNA metabarcoding of coastal macroinvertebrates. Metabarcoding and Metagenomics 5: e70063. https://doi.org/10.3897/mbmg.5.70063
Table S1, Figures S1–S5
opencc-zeroJan 2022View details →
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Supplementary material 2 from: Leite BR, Vieira PE, Troncoso JS, Costa FO (2021) Comparing species detection success between molecular markers in DNA metabarcoding of coastal macroinvertebrates. Metabarcoding and Metagenomics 5: e70063. https://doi.org/10.3897/mbmg.5.70063
Tables S2, S3
opencc-zeroJan 2022View details →
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Supplementary material 2 from: Van den Bulcke L, De Backer A, Ampe B, Maes S, Wittoeck J, Waegeman W, Hostens K, Derycke S (2021) Towards harmonization of DNA metabarcoding for monitoring marine macrobenthos: the effect of technical replicates and pooled DNA extractions on species detection. Metabarcoding and Metagenomics 5: e71107. https://doi.org/10.3897/mbmg.5.71107
Tables S1–S8
opencc-zeroJan 2022View details →
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Supplementary material 1 from: Van den Bulcke L, De Backer A, Ampe B, Maes S, Wittoeck J, Waegeman W, Hostens K, Derycke S (2021) Towards harmonization of DNA metabarcoding for monitoring marine macrobenthos: the effect of technical replicates and pooled DNA extractions on species detection. Metabarcoding and Metagenomics 5: e71107. https://doi.org/10.3897/mbmg.5.71107
Figures S1–S14
opencc-zeroJan 2022View details →
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Supplementary material 1 from: Brasell KA, Pochon X, Howarth J, Pearman JK, Zaiko A, Thompson L, Vandergoes MJ, Simon KS, Wood SA (2022) Shifts in DNA yield and biological community composition in stored sediment: implications for paleogenomic studies. Metabarcoding and Metagenomics 6: e78128. https://doi.org/10.3897/mbmg.6.78128
Figures S1–S4
opencc-zeroFeb 2022View details →
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Supplementary material 2 from: Brasell KA, Pochon X, Howarth J, Pearman JK, Zaiko A, Thompson L, Vandergoes MJ, Simon KS, Wood SA (2022) Shifts in DNA yield and biological community composition in stored sediment: implications for paleogenomic studies. Metabarcoding and Metagenomics 6: e78128. https://doi.org/10.3897/mbmg.6.78128
Table S1
opencc-zeroFeb 2022View details →
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Supplementary material 1 from: Nagai S, Sildever S, Nishi N, Tazawa S, Basti L, Kobayashi T, Ishino Y (2022) Comparing PCR-generated artifacts of different polymerases for improved accuracy of DNA metabarcoding. Metabarcoding and Metagenomics 6: e77704. https://doi.org/10.3897/mbmg.6.77704
Table S1–S3
opencc-zeroFeb 2022View details →
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Supplementary material 3 from: Nagai S, Sildever S, Nishi N, Tazawa S, Basti L, Kobayashi T, Ishino Y (2022) Comparing PCR-generated artifacts of different polymerases for improved accuracy of DNA metabarcoding. Metabarcoding and Metagenomics 6: e77704. https://doi.org/10.3897/mbmg.6.77704
same_tophit_count_merge.pl
opencc-zeroFeb 2022View details →
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record