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70 results for “Predator-prey interactions”

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dryad28/100

Data from: Persistence of an extinction-prone predator-prey interaction through metapopulation dynamics

In theory, predator-prey pairs with extinction-prone local populations can persist through metapopulation dynamics, wherein local populations fluctuate asynchronously, occasionally providing dispersers that prevent permanent extinction in all patches. A few studies have shown that spatial structure can extend predator-prey persistence. However, no studies have unequivocally demonstrated the asynchrony among patches, low dispersal rates, and rescue effects that prove metapopulation dynamics extend persistence. We used a protist predator-prey pair to show that spatial subdivision lengthens persistence through metapopulation dynamics. The pair comprised the predaceous ciliate, Didinium nasutum, feeding on the bacterivorous ciliate, Colpidium cf. striatum. A replicated experiment assessed how habitat subdivision affects persistence. Undivided habitats were of four volumes: 30, 180, 270, and 750 mt. Subdivided microcosms, or ''arrays,'' were groups of nine or 25 linked 30-mL bottles (270 or 750 mt total volume). In arrays, predators and prey persisted for 130 d (602 prey and 437 predator generations), at which point the experiment ended. Predators went extinct in undivided microcosms of equivalent volumes within a mean of only 70 d. Predators persisted for a mean of just 19 d in isolated 30-mL bottles (equivalent to isolated patches of arrays). In a separate experiment, prey were driven extinct in four of 15 isolated 30-mL bottles, and persistence times of predators were broadly similar. We documented the following hallmarks of metapopulation dynamics: (1) asynchronous fluctuations in different subpopulations; (2) frequent local prey extinctions and recolonizations; (3) persistence of protists in arrays, despite extinction of isolated local populations; and (4) rescue effects in predator populations. Other experiments measured dispersal rates and the effects on local dynamics of immigrant predators and prey, and initial predator : prey ratios. Only a small fraction of protists dispersed within a generation, consistent with metapopulation dynamics. Immigration of predators increased the frequency of local extinctions of prey, and immigration of prey increased the persistence of both predators and prey. Higher initial predator:prey ratios decreased the persistence of prey in undivided volumes. Although the pair persisted regionally in arrays, data indicated that local extinctions of prey were common. In array patches, predator:prey ratios were higher and predator-prey cycles were shorter than in undivided volumes. Dispersal made local dynamics more prone to extinction, yet promoted regional persistence because the risk of extinction of distant subpopulations became independent.

opencc-zeroDec 2013View details →
dryad28/100

Dimethyl sulfide mediates microbial predator-prey interactions between zooplankton and algae in the ocean

<p>Phytoplankton are key components of the oceanic carbon and sulfur cycles. During bloom events, some species can emit large amounts of the organosulfur volatile dimethyl sulfide (DMS) into the ocean, and consequently the atmosphere, where it can modulate aerosol formation and affect climate. In aquatic environments, DMS plays an important role as a chemical signal mediating diverse trophic interactions. Yet, its role in microbial predator-prey interactions remains elusive with contradicting evidence for its role in either algal chemical defense or in the chemoattraction of grazers to prey cells. Here, we investigated the signaling role of DMS during zooplankton-algae interactions by genetic and biochemical manipulation of the algal DMS-generating enzyme dimethylsulfoniopropionate lyase (DL) in the bloom-forming alga <em>Emiliania huxleyi</em>. We inhibited DL activity in <em>E. huxleyi</em> cells in-vivo using the selective DL-inhibitor 2-bromo-3-(dimethylsulfonio)-propionate (Br-DMSP), and overexpressed the DL encoding gene in the model diatom <em>Thalassiosira pseudonana.</em> We showed that algal DL activity did not serve as an anti-grazing chemical defense, but paradoxically enhanced predation by the grazer <em>Oxyrrhis marina </em>and other micro- and mesozooplankton, including ciliates and copepods. Consumption of algal prey with induced DL activity also promoted <em>O. marina</em> growth. Overall, our results demonstrate that DMS-mediated grazing may be ecologically important and prevalent during prey-predator dynamics in aquatic ecosystems. The role of algal DMS revealed here, acting as an eat-me signal for grazers, raises fundamental questions regarding the retention of its biosynthetic enzyme through the evolution of dominant bloom-forming phytoplankton in the ocean.</p>

opencc-zeroAug 2021View details →
dryad28/100

Data from: Reciprocal behavioral plasticity and behavioral types during predator-prey interactions

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publicJul 2013View details →
dryad28/100

Data from: The mechanics of predator-prey interactions: first principles of physics predict predator-prey size ratios

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publicDec 2018View details →
dryad28/100

Dimethyl sulfide mediates microbial predator-prey interactions between zooplankton and algae in the ocean

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publicAug 2021View details →
dryad28/100

Data from: Spatial extinction or persistence: landscape-temperature interactions perturb predator-prey dynamics

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publicNov 2016View details →
dryad28/100

Data from: Persistence of an extinction-prone predator-prey interaction through metapopulation dynamics

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publicNov 2014View details →
dryad28/100

Data from: Food web interaction strength distributions are conserved by greater variation between than within predator-prey pairs

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publicJul 2019View details →
dryad28/100

Data from: Incorporating anthropogenic effects into trophic ecology: predator-prey interactions in a human-dominated landscape

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publicAug 2015View details →
geo24/100

Predator-prey interactions between bacteria and the nematode Caenorhabditis elegans via interkingdom signaling molecule indole

GEO Series GSE86312. Caenorhabditis elegans. 4 samples. Type: Expression profiling by array.

openGEO-OpenAug 2019View details →

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Allen Brain Atlas

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neuroscienceopenDocumentation, web resources, and API references are available online.
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behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
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DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record

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