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85
datasets available to search
ShareScore release 0.9.0
Dataset results
85 results for “Resource Modelling”
Surrogate modelling for the forecast of Seveso-type atmospheric pollutant dispersion - Online Resource 1
<p>Online Resource 1: Test-data response of GIM model.</p>
Resource Description Framework (RDF) Modeling of Named Entity Co-occurrences Derived from Biomedical Literature in the PubChemRDF
<p>This is the dataset used for the publication of "Resource Description Framework (RDF) Modeling of Named Entity Co-occurrences Derived from Biomedical Literature in the PubChemRDF". </p>
Replication package for the paper "Family Resources and Children's Skills: Development of a Skills Attainment Model"
<p>Replication package for the paper “Family Resources and Children’s Skills: Development of a Skills Attainment Model”. The package contains the Stata code for the data preparation and the Mplus code for the analyses performed in the paper. </p> <p>The used data set is available in the highly secure environment of Statistics Netherlands. To gain access, a number of steps must be completed, which can be found on the following website: <a href="https://www.cbs.nl/en-gb/our-services/customised-services-microdata/microdata-conducting-your-own-research">https://www.cbs.nl/en-gb/our-services/customised-services-microdata/microdata-conducting-your-own-research</a>.</p>
Data from: Evolution of defense against depletion of local food resources in a mechanistic foraging model
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Data from: Estimating resource preferences of a native bumblebee: the effects of availability and use-availability models on preference estimatess
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Data from: Fruiting strategies of perennial plants: a resource budget model to couple mast seeding to pollination efficiency and resource allocation strategies
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Data from: Species diversity rises exponentially with the number of available resources in a multi-trait competition model
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Effects of Diet on Resource Utilization by a Model Human Gut Microbiota Containing Bacteroides cellulosilyticus WH2, a Symbiont with an Extensive Glycobiome
GEO Series GSE48537. Dorea longicatena DSM 13814; [Clostridium] scindens ATCC 35704; Faecalibacterium prausnitzii M21/2; Collinsella aerofaciens ATCC 25986; Thomasclavelia spiroformis DSM 1552; Bacteroides thetaiotaomicron VPI-5482; Blautia obeum ATCC 29174; [Ruminococcus] torques ATCC 27756; Bacteroides caccae ATCC 43185; Agathobacter rectalis ATCC 33656; Bacteria; Bacteroides ovatus ATCC 8483; Bacteroides uniformis ATCC 8492; Phocaeicola vulgatus ATCC 8482; Parabacteroides distasonis ATCC 8503; Bacteroides cellulosilyticus; Bacteroides sp. WH2. 895 samples. Type: Expression profiling by high throughput sequencing; Other; Expression profiling by array.
Effects of Diet on Resource Utilization by a Model Human Gut Microbiota Containing Bacteroides cellulosilyticus WH2, a Symbiont with an Extensive Glycobiome (RNA-Seq)
GEO Series GSE48993. Bacteria; Bacteroides cellulosilyticus. 116 samples. Type: Expression profiling by high throughput sequencing.
CNA data from The human glioblastoma cell culture resource: validated cell models representing all molecular subtypes
GEO Series GSE72209. Homo sapiens. 48 samples. Type: Genome variation profiling by SNP array.
Transplanted Human Intestinal Organoids: A Resource for Modeling Human Intestinal Development
GEO Series GSE226925. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
Model output for "A high-resolution physical-biogeochemical model for marine resource applications in the Northern Indian Ocean (MOM6-COBALT-IND12)"
<p>This dataset contains the numerical model output files used in the analysis described in "A high-resolution physical-biogeochemical model for marine resource applications in the Northern Indian Ocean (MOM6-COBALT-IND12)"</p>
Data from: Effects of diet on resource utilization by a model human gut microbiota containing Bacteroides cellulosilyticus WH2, a symbiont with an extensive glycobiome
The human gut microbiota is an important metabolic organ. However, little is known about how its individual species interact, establish dominant positions, and respond to changes in environmental factors such as diet. In the current study, gnotobiotic mice colonized with a simplified model microbiota composed of 12 sequenced human gut bacterial species were fed oscillating diets of disparate composition. Rapid, reproducible and reversible changes in community structure were observed. Time series microbial RNA-Seq analyses revealed staggered functional responses to diet shifts throughout the community that were heavily focused on carbohydrate and amino acid metabolism. High-resolution shotgun metaproteomics confirmed many of these responses at a protein level. One member, Bacteroides cellulosilyticus WH2, proved exceptionally fit regardless of diet. Its genome encoded more carbohydrate active enzymes than any known Bacteroidetes. Transcriptional profiling indicated that B. cellulosilyticus WH2 is an adaptive forager that tailors its versatile carbohydrate utilization strategy to available dietary polysaccharides, with a strong emphasis on plant-derived xylans abundant in dietary staples like cereal grains. Two highly expressed, diet-specific polysaccharide utilization loci (PULs) in B. cellulosilyticus WH2 were identified, one with characteristics of xylan utilization systems. Introduction of a B. cellulosilyticus WH2 library comprising 26,750 isogenic transposon mutants into gnotobiotic mice along with other model community members confirmed that these loci represent critical diet-specific fitness determinants. The specific carbohydrates that trigger overexpression of these two loci and many of the organism's 111 other predicted PULs were identified by RNA-Seq during in vitro growth on 31 distinct carbohydrate substrates, allowing us to better interpret in vivo RNA-Seq and proteomics data. These results offer insight into how gut microbes adapt to dietary perturbations, both at a community level and from the perspective of a well-adapted symbiont with exceptional saccharolytic capabilities, and illustrate the value of studying defined models of the human gut microbiota.
Psychoeducational Intervention Model to Improve Nutritional Status in Low Resource Settings
ClinicalTrials.gov study NCT02914002. IPD Sharing: NO. Countries: 1. Publications: 0.
Data from: Predicting local and non-local effects of resources on animal space use using a mechanistic step-selection model
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Data from: Effects of diet on resource utilization by a model human gut microbiota containing Bacteroides cellulosilyticus WH2, a symbiont with an extensive glycobiome
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Effects of Diet on Resource Utilization by a Model Human Gut Microbiota Containing Bacteroides cellulosilyticus WH2, a Symbiont with an Extensive Glycobiome (COPRO-Seq)
GEO Series GSE48193. Bacteria. 611 samples. Type: Expression profiling by high throughput sequencing; Other.
Expression data from The human glioblastoma cell culture resource: validated cell models representing all molecular subtypes (transcript)
GEO Series GSE72218. Homo sapiens. 15 samples. Type: Expression profiling by array.
Effects of Diet on Resource Utilization by a Model Human Gut Microbiota Containing Bacteroides cellulosilyticus WH2, a Symbiont with an Extensive Glycobiome (GeneChip)
GEO Series GSE48532. Bacteroides sp. WH2; Bacteroides uniformis ATCC 8492; Phocaeicola vulgatus ATCC 8482; Parabacteroides distasonis ATCC 8503; Dorea longicatena DSM 13814; Bacteroides ovatus ATCC 8483; Faecalibacterium prausnitzii M21/2; Collinsella aerofaciens ATCC 25986; Bacteroides thetaiotaomicron VPI-5482; [Ruminococcus] torques ATCC 27756; Bacteroides caccae ATCC 43185; Thomasclavelia spiroformis DSM 1552; Agathobacter rectalis ATCC 33656; Blautia obeum ATCC 29174; [Clostridium] scindens ATCC 35704. 168 samples. Type: Expression profiling by array.
Expression data from The human glioblastoma cell culture resource: validated cell models representing all molecular subtypes (exon)
GEO Series GSE72217. Homo sapiens. 47 samples. Type: Expression profiling by array.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.