Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
194
datasets available to search
ShareScore release 0.7.1
Dataset results
194 results for “Reticulation”
New species of Tulostoma (Basidiomycota) with reticulated spores - Additional data
<p>This dataset is composed of aditional figures showing morphological characters, as well as the phylogenetic tree topologies resulted from the species delimitation method (Bayesian Poisson Tree Processes - bPTP) used in our study. You can also find an Excel sheet with caption for species names used for species delimitation.</p> <p>The morphological data involves both macro and microcharacters pictures of one of the new species (Tulostoma paratyense). Bars on figures indicate size scale. Descriptions of the figures:<br> 1. Scales found on stipe<br> 2. Spore-sac in detail showing the mouth<br> 3. The surface of the spore-sac<br> 4. Spines found on the surface of spore-sac<br> 5. Hyphae from the stipe<br> 6. Hyphae and spores found in the gleba<br> 7. Basidiomata</p> <p>The bPTP topologies are also provided. In those files you will find a caption showing the names of species at the clade of "reticulated spores" species. We also provide an Excel sheet with captions for the species names. The blue and red colors show the most plausible delimitation into species and individuals from the same species. Numbers indicate the support values based on posterior probabilities of the respective delimitations. </p>
Data from: Nightmare or delight: taxonomic circumscription meets reticulate evolution in the phylogenomic era
<p>Phylogenetic studies in the phylogenomics era have demonstrated that reticulate evolution greatly impedes the accuracy of phylogenetic inference, and consequently can obscure taxonomic treatments. However, the systematics community lacks a broadly applicable strategy for taxonomic delimitation in groups characterized by pervasive reticulate evolution. The red-fruit genus, <em>Stranvaesia</em>, provides an ideal model to examine the influence of reticulation on generic circumscription, particularly where hybridization and allopolyploidy dominate the evolutionary history. In this study, we conducted phylogenomic analyses integrating data from hundreds of single-copy nuclear (SCN) genes and plastomes, and interrogated nuclear paralogs to clarify the inter/intra-generic relationship of <em>Stranvaesia</em> and its allies in the framework of Maleae. Analyses of phylogenomic discord and phylogenetic networks showed that allopolyploidization and introgression promoted the origin and diversification of the Stranvaesia clade, a conclusion further bolstered by cytonuclear and gene tree discordance. With a well-inferred phylogenetic backbone, we propose an updated generic delimitation of <em>Stranvaesia</em> and introduce a new genus, <em>Weniomeles</em>. This new genus is distinguished by its purple-black fruits, thorns trunk and/or branches, and a distinctive fruit core anatomy characterized by multilocular separated by a layer of sclereids and a cluster of sclereids at the top of the locules. Through this study, we highlight a broadly applicable workflow that underscores the significance of reticulate evolution analyses in shaping taxonomic revisions from phylogenomic data.</p>
Data from: Structural and defensive roles of angiosperm leaf venation network reticulation across an Andes-Amazon elevation gradient
Open the record for dataset details and reuse information.
Data from: Phylogenomic data reveal reticulation and incongruence among mitochondrial candidate species in Dusky Salamanders (Desmognathus)
Open the record for dataset details and reuse information.
Dataset from: Incomplete lineage sorting and reticulate evolution mask species relationships in Brunelliaceae, an Andean family with rapid, recent diversification
Open the record for dataset details and reuse information.
Unveiling the Patterns of Reticulated Evolutionary Processes with Phylogenomics: Hybridization and Polyploidy in the genus Rosa
Open the record for dataset details and reuse information.
Data from: Phylogeny and evolution of the neotropical radiation of Lachemilla (Rosaceae): uncovering a history of reticulate evolution and implications for infrageneric classification
Open the record for dataset details and reuse information.
Data from: Reticulate evolution in nuclear Middle America causes discordance in the phylogeny of palm‐pitvipers (Viperidae: Bothriechis)
Open the record for dataset details and reuse information.
Data from: Ortho2Web: A workflow for disentangling the roles of hybridization and allopolyploidization in reticulation within Campanulaceae
Open the record for dataset details and reuse information.
Phylogenomic insights into species relationships, reticulate evolution, and biogeographic diversification of the ginseng genus Panax (Araliaceae), with an emphasis on the diversification in the Himalayan – Hengduan Mountains
Open the record for dataset details and reuse information.
Whole genome analyses disentangle reticulate evolution of primroses in a biodiversity hotspot
Open the record for dataset details and reuse information.
Data from: Reticulate evolution within a spruce (Picea) species complex revealed by population genomic analysis
Open the record for dataset details and reuse information.
Data from: Nightmare or delight: taxonomic circumscription meets reticulate evolution in the phylogenomic era
Open the record for dataset details and reuse information.
Data from: Deep reticulation and incomplete lineage sorting obscure the diploid phylogeny of rain-lilies and allies (Amaryllidaceae tribe Hippeastreae)
Open the record for dataset details and reuse information.
Data from: Reticulate evolution helps explain apparent homoplasy in floral biology and pollination in baobabs (Adansonia; Bombacoideae; Malvaceae)
Open the record for dataset details and reuse information.
Data from: Phylogenetic comparative methods on phylogenetic networks with reticulations
Open the record for dataset details and reuse information.
Data from: A multilocus phylogeny of the fish genus Poeciliopsis: solving taxonomic uncertainties and preliminary evidence of reticulation
Open the record for dataset details and reuse information.
Complex reticulate evolution of the speckled brush-furred rats (Lophuromys) in the Ethiopian centre of endemism
Open the record for dataset details and reuse information.
Rampant Reticulation in a Rapid Radiation of Tropical Trees - Insights from <i>Inga</i> (Fabaceae)
Open the record for dataset details and reuse information.
Reticulate evolution and rapid development of reproductive barriers upon secondary contact in a forest fungus
Open the record for dataset details and reuse information.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.