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1,732 results for “SPINE”
Fig. 3. Mazax pax Resikind, 1969. A–C, G–H in Two fancy spines and a collar: a taxonomic review of the myrmecomorphic spider genus Mazax O. Pickard-Cambridge, 1898 (Araneae: Corinnidae: Castianeirinae) in South America
Fig. 3. Mazax pax Resikind, 1969. A–C, G–H. ♀ (IBSP-221909). D–F, I–J. ♂ (ICN-Ar-8773). A. Dorsal view. B. Lateral view. C. Ventral view. D. Dorsal view. E. Lateral view (black arrow indicates AS II). F. Ventral view. G. Epigyne, ventral view. H. Same, dorsal view. I. Palp, ventral view. J. Same, retrolateral view. Abbreviations: CD = copulatory duct; CO = copulatory opening; CP = chemocensory patch; E = embolus; FD = fertilization duct; RTA = retrolateral tibial apophysis; ST I = primary spermatheca; ST II = secondary spermatheca. Scales: 0.5 mm.
Fig. 8 in Two fancy spines and a collar: a taxonomic review of the myrmecomorphic spider genus Mazax O. Pickard-Cambridge, 1898 (Araneae: Corinnidae: Castianeirinae) in South America
Fig. 8. Mazax spinosa (Simon, 1898). A–C, G–H. ♀ (IBSP-221867). D–F, I–J. ♂ (IBSP-221906). A. Dorsal view. B. Lateral view. C. Ventral view. D. Dorsal view. E. Lateral view (black arrow indicates AS II). F. Ventral view. G. Epigyne, ventral view. H. Same, dorsal view. I. Palp, ventral view. J. Same, retrolateral view. Abbreviations: CD = copulatory duct; CO = copulatory opening; CP = chemocensory patch; E = embolus; FD = fertilization duct; RTA = retrolateral tibial apophysis; ST I = primary spermatheca; ST II = secondary spermatheca. Scales: 0.5 mm.
Cast Away in the Adriatic: Low Degree of Parallel Genetic Differentiation in Three-Spined Sticklebacks
<p>This repository incorporates data and scripts associated with the paper "Cast Away in the Adriatic: Low Degree of Parallel Genetic Divergence in Three-Spined Sticklebacks".</p> <p>Included in the repository are the following compressed folders: </p> <ul> <li>Moments_models&data.zip: two-population demographic models and SFS to run in <em>moments.</em></li> <li>Stairwayplot.zip: blueprint files for multiple mutation rates and results for StairwayPlots.</li> <li>TreeMix.zip: pipeline to infer population splits and mixture events from allele frequency data using TreeMix, including input files.</li> <li>VCF.zip: a filtered VCF file for all three-spined stickleback samples.</li> </ul> <p>The scripts for TreeMix and demographic analyses in <em>moments</em> are also available on <a href="https://github.com/carolindahms">GitHub</a>.</p>
Native MS dataset for: "Caldendrin and myosin V regulate synaptic spine apparatus localization via ER stabilization in dendritic spines."
<p>Native mass spectrometry dataset used in: <strong>Caldendrin and myosin V regulate synaptic spine apparatus localization via ER stabilization in dendritic spines.</strong> Anja Konietzny, Jasper Grendel, Alan Kadek, Michael Bucher, Yuhao Han, Nathalie Hertrich, Dick H. W. Dekkers, Jeroen A. A. Demmers, Kay Grünewald, Charlotte Uetrecht and Marina Mikhaylova. <i>The EMBO Journal</i> (2021) e106523. doi:<a href="https://doi.org/10.15252/embj.2020106523">10.15252/embj.2020106523</a></p><p> </p><p><strong>Description:</strong></p><p>Native mass spectrometry (MS) analysis of the stoichiometry and ion occupancy of recombinant human calmodulin (CaM) and recombinant rat caldendrin (CaD) complex with synthetic mouse myosinV IQ1 (myoIQ) motif in the presence / absence of excess Ca2+ and Mg2+ ions.</p><p><strong>Sample processing:</strong></p><p>Full-length CaD and CaM as well as the synthetic myoVa peptide were buffer exchanged into 150 mM aqueous ammonium acetate solution (pH 7.4). CaM was twice passed through a Bio-Spin P-6 gel filtration spin column (6 kDa cut-off, <i>Bio-Rad</i>), CaD and the myoVa peptide were buffer exchanged through five cycles of tenfold dilution and re-concentration using centrifugal concentrators Vivaspin 500 (10 kDa cut-off, <i>Sartorius</i>) or Amicon Ultra 0.5mL (3 kDa cut-off, <i>Merck/Millipore</i>), respectively. Desalted proteins were introduced into an Orbitrap Q Exactive UHMR mass spectrometer (<i>Thermo Scientific</i>) via static nanoelectrospray ionization from in-house prepared gold-coated borosilicate glass capillaries Kwik-Fil 1B120F-4 (<i>World Precision Instruments</i>). Proteins were sprayed and analysed at 8.5 µM concentration in ammonium acetate alone or supplemented with 200 µM calcium acetate and 100 µM magnesium acetate (both for trace metal analysis, <i>Sigma-Aldrich</i>). For interaction analysis, CaM and/or caldendrin were mixed with myoVa peptide which had final concentration of 8.5 µM (low concentration) or 34 µM (high concentration). The mass spectrometer was tuned for best signal quality and intensity, keeping ion activation and unfolding minimal. Namely, electrospray voltage was kept at 1.3 kV, source desolvation temperature 250°C, in-source desolvation -50 V, ion transfer profile "high m/z", analyzer profile "low m/z", analyzer target resolution 12500 acquiring in mass range 500 – 9000 m/z. Nitrogen was used as collision gas in HCD cell at relative gas pressure setting 7.0 with gentle collisional activation by 10 V HCD voltage gradient.</p><p><strong>Data processing:</strong></p><p>Raw spectra were averaged over at least 50 scans for mass deconvolution and peak assignment in UniDec 4.4.1 package (<i>Marty et al., 2015</i>). The averaged spectra were exported for ZENODO deposition using <i>Thermo Scientific</i> FreeStyle 1.5.93.34 as single-scan Thermo .raw files (including instrumental parameters metadata) as well as in plain m/z vs intensity .txt files.</p>
Fig. 3 in Sound production and pectoral spine locking in a Neotropical catfish (Iheringichthys labrosus, Pimelodidae)
Fig. 3. Sonogram (top) and oscillogram (below) swimbladder drumming sounds recorded underwater illustrating sound characteristics measured. TD = train durations; SD = sound duration; PP = pulse period; PD = pulse durations.
Fig. 1 in Sound production and pectoral spine locking in a Neotropical catfish (Iheringichthys labrosus, Pimelodidae)
Fig. 1. Sonogram (top) and oscillogram (below) of pectoral sounds illustrating sound characteristics measured. TD = train durations; SD = sound duration; PP = pulse period; PD = pulse durations.
Fig. 2 in Sound production and pectoral spine locking in a Neotropical catfish (Iheringichthys labrosus, Pimelodidae)
Fig. 2. Oscillogram of pectoral sound (all pulses in the oscillogram) emitted by Iheringichthys labrosus caught in the net in field.
Regulatory spine RS3 residue of protein kinases: a lipophilic bystander or a decisive element in the small-molecule kinase inhibitor binding?
<p>Datasets related to publication: </p> <p>Shevchenko E, Pantsar T: Regulatory spine RS3 residue of protein kinases: a lipophilic bystander or a decisive element in the small-molecule kinase inhibitor binding?. <em><em>Biochem Soc Trans</em></em> 28 February 2022; 50 (1): 633–648</p> <p>https://doi.org/10.1042/bst20210837</p> <p> </p> <p> </p>
Tracking magma spine extrusion from space: Implications for conduit and topography complexity at Shiveluch volcano, Kamchatka - Photogrammetric data repository
<p>This is a dataset relevant for a paper on lava spine extrusion at Shieveluch volcano, Kamchatka. Data was used to show that the spine elongates along a previously identified fracture line and bends to a preferred northerly direction. By repeated morphology analysis and feature tracking, we constrain a spine diameter of ~300 m, extruding at a velocity of 1.7 m/day and discharge rate of 0.3-0.7 m³/s. Results are relevant for understanding the growth and collapse hazards of spines and provide unique insights into the hidden magma-conduit architecture.</p> <p>The data consists of three parts. First, we provide the filtered and corrected three dimensional point clouds generated from Pleiades tristereo data. These 3D point clouds were co-aligned and now allow analysing subtle changes. Point clouds are provided in .las format. Second, we provide the filtered and corrected digital elevation models generated from the point cloud data, these DEMs are provided in geotiff format. The name of the files indicates the dates of their acquisition. Third and lastly, we provide an orthomap stack used to estimate displacements by tracking offsets.</p> <p> </p>
Fig. 6 in Morphometric Variation Of Hybridizing Species And Gynogenetic Biotypes Of Spined Loaches (Cobitidae, Cobitis) In River Systems Of Ukraine
Fig. 6. UPGMA clustering of biotypes by Mahalanobis distances calculated for body measurements and indices separately. Rectangles bounds the clusters with more than 90 % AU-support.
Fig 5. 95 in Morphometric Variation Of Hybridizing Species And Gynogenetic Biotypes Of Spined Loaches (Cobitidae, Cobitis) In River Systems Of Ukraine
Fig 5. 95 % confidence ellipses of the biotypes in the morphospace of four between-group principal components calculated for indices. Mean groups of each biotype is marked with black point and designation.
Fig. 3. 95 in Morphometric Variation Of Hybridizing Species And Gynogenetic Biotypes Of Spined Loaches (Cobitidae, Cobitis) In River Systems Of Ukraine
Fig. 3. 95 % confidence interval ellipses of the biotypes in the morphospace of bgPC1 and bgPC2 calculated for log10-transformed absolute traits. Each biotype means are marked with black points and names. The biotypes are explained in table 1.
Fig. 4. 95 in Morphometric Variation Of Hybridizing Species And Gynogenetic Biotypes Of Spined Loaches (Cobitidae, Cobitis) In River Systems Of Ukraine
Fig. 4. 95% confidence interval ellipses of the biotypes in the morphospace of bg PC3 and bgPC4 A calculated for log10 transformed absolute traits. Designations the same as on fig. 3.
Fig. 2 in Morphometric Variation Of Hybridizing Species And Gynogenetic Biotypes Of Spined Loaches (Cobitidae, Cobitis) In River Systems Of Ukraine
Fig. 2. Body measurements for Cobitis. Th e original fish image is from Wilhelm von Wright out of Fries, 1895.
Fig. 1 in Morphometric Variation Of Hybridizing Species And Gynogenetic Biotypes Of Spined Loaches (Cobitidae, Cobitis) In River Systems Of Ukraine
Fig. 1. Collection points of spined loaches in the river systems of Ukraine. Th e decoding of the numbering of samples is given in Material and methods.
Fig.ç3.D isasterina akajimaensis sp. nov., holotype (NSMT E-6758). A, Anal pore and a patch; B, madreporite; C, proximal part of arm, abactinal view; D, oral plate pair and interradial uncalci ed area, some oral spines have been lost (see also Fig. 6 for oral plate pair and interradial uncalci ed area at another interradius); E, proximal part of ambulacral furrow (oral plates seen at the lower-le corner are drawn in Fig. 6); F, inferomarginal spinelets, abactinal view. Abbreviations: als, actinolateral spine; apo, anal pore; fs, furrow spine; imp, inferomarginal plate; ims, inferomarginal spine; ir, interradial; iua, interradial uncalci ed area; md, madreporite; op, oral plate; os, oral spine; r, radial; rp, rigid patch; sas, subambulacral spine. in A New Asterinid Sea Star, Disasterina akajimaensis (Echinodermata: Asteroidea) from the Ryukyu Islands, Japan, with Notes on the Genus Disasterina
Fig.ç3.D isasterina akajimaensis sp. nov., holotype (NSMT E-6758). A, Anal pore and a patch; B, madreporite; C, proximal part of arm, abactinal view; D, oral plate pair and interradial uncalci ed area, some oral spines have been lost (see also Fig. 6 for oral plate pair and interradial uncalci ed area at another interradius); E, proximal part of ambulacral furrow (oral plates seen at the lower-le corner are drawn in Fig. 6); F, inferomarginal spinelets, abactinal view. Abbreviations: als, actinolateral spine; apo, anal pore; fs, furrow spine; imp, inferomarginal plate; ims, inferomarginal spine; ir, interradial; iua, interradial uncalci ed area; md, madreporite; op, oral plate; os, oral spine; r, radial; rp, rigid patch; sas, subambulacral spine.
Wikidata ALPINE-based WINE & SPINE embedding
<p>100-dimensional Wikidata graph embedding obtained using degree-based WINE and SPINE.</p>
Text-fig. 9. Progyrolepis heyleri POPLIN, 1999. a: right dentalosplenial of adult specimen in lateral view, GMC 1, scale bar 5 mm; b: left dentalospelenial and suboperculum in medial view, GMC 1, scale bar 5 mm; c: set of bones of the right side of the cheek displaying maxilla, preoperculum, hyomandibula, left and right ceratohyal, epibranchial and neural spine from the axial skeleton, G 123, scale bar 5 mm; d: drawing of the right frontal in dorsal view, GMC 81, scale bar 5 mm; e: right operculum in lateral view, GMC 10, scale bar 5 mm. Abbreviations: Cbr – ceratobranchial, Cer – ceratohyal, Ds – dorsal spine, Hy – hyomandibula, Md – mandible, Mx – maxilla, Op – operculum, Pop – preoperculum. in New Actinopterygians From The Permian Of The Brive Basin, And The Ichthyofaunas Of The French Massif Central
Text-fig. 9. Progyrolepis heyleri POPLIN, 1999. a: right dentalosplenial of adult specimen in lateral view, GMC 1, scale bar 5 mm; b: left dentalospelenial and suboperculum in medial view, GMC 1, scale bar 5 mm; c: set of bones of the right side of the cheek displaying maxilla, preoperculum, hyomandibula, left and right ceratohyal, epibranchial and neural spine from the axial skeleton, G 123, scale bar 5 mm; d: drawing of the right frontal in dorsal view, GMC 81, scale bar 5 mm; e: right operculum in lateral view, GMC 10, scale bar 5 mm. Abbreviations: Cbr – ceratobranchial, Cer – ceratohyal, Ds – dorsal spine, Hy – hyomandibula, Md – mandible, Mx – maxilla, Op – operculum, Pop – preoperculum.
Text-fig. 8. Progyrolepis heyleri POPLIN, 1999. a: maxilla and lower jaw of juvenile specimen in lateral view, GMC 43, whitened, scale bar 5 mm; b: maxilla and lower jaw of juvenile specimen, imprint of the maxillary medial face with a distinctive horizontal lamina, lower jaw in lateral view, GMC 83, whitened, scale bar 5 mm; c: haemal arch of the axial skeleton and fragment of a strong undivided lepidotrichium, GMC 25, whitened, scale bar 5 mm; d: drawing of the haemal arch, GMC 25, scale bar 5 mm; e: jugal in medial view with the infraorbital sensory canal and imprint of the sculpture on the lateral face of the bone, GMC 7, whitened, scale bar 5 mm. Abbreviations: ha – haemal arch, hl – horizontal lamina, hs – haemal spine, ioc – infraorbital sensory canal, lep – lepidotrichium. in New Actinopterygians From The Permian Of The Brive Basin, And The Ichthyofaunas Of The French Massif Central
Text-fig. 8. Progyrolepis heyleri POPLIN, 1999. a: maxilla and lower jaw of juvenile specimen in lateral view, GMC 43, whitened, scale bar 5 mm; b: maxilla and lower jaw of juvenile specimen, imprint of the maxillary medial face with a distinctive horizontal lamina, lower jaw in lateral view, GMC 83, whitened, scale bar 5 mm; c: haemal arch of the axial skeleton and fragment of a strong undivided lepidotrichium, GMC 25, whitened, scale bar 5 mm; d: drawing of the haemal arch, GMC 25, scale bar 5 mm; e: jugal in medial view with the infraorbital sensory canal and imprint of the sculpture on the lateral face of the bone, GMC 7, whitened, scale bar 5 mm. Abbreviations: ha – haemal arch, hl – horizontal lamina, hs – haemal spine, ioc – infraorbital sensory canal, lep – lepidotrichium.
РИС. 7. НедостаточнаЯ промывка раковин глохидиев после очиЩениЯ в Щелочи (5% КОН). А, С. «Замыленность» пор наружной поверхности створок (Cristaria tuberculata, оЗ. Ханка, Приморский кр.). B. Остаток Щелочи, выпавШий кристаллами на поверхности личинки (Unio dembeae, р. Дуко, ЭфиопиЯ). D. Капли раствора Щелочи (укаЗаны стрелками) на поверхности Шипов крючка (Nodularia douglasiae, р. Гион, о-в Хонсю, ЯпониЯ). МасШтаб 5 мкм (А, С), 2 мкм (B, D). Микроскоп Zeiss MERLIN, напыление углеродом (А, В), хромом (С, D). FIG. 7. Insufficient rinsing of glochidia after cleaning in alkali (5% KOH). A, C. «Blurredness» of the exterior valve pores (Cristaria tuberculata, Khanka Lake, Primorsky Krai). B. Precipitation of alkali crystals on the exterior glochidia surface (Unio dembeae, Duko River, Ethiopia). D. Drops of alkali (indicated by arrows) on the hook spines (Nodularia douglasiae, Gion River, Honshu Island, Japan). Scale bars 5 μm (A, C), 2 μm (B, D). Zeiss MERLIN microscope, sputter coating with carbon (A, B) and chromium (C, D). in Методика подготовки раковин глохидиев (Bivalvia, Unionidae) длЯ работы на сканируюЩем Электронном микроскопе
РИС. 7. НедостаточнаЯ промывка раковин глохидиев после очиЩениЯ в Щелочи (5% КОН). А, С. «Замыленность» пор наружной поверхности створок (Cristaria tuberculata, оЗ. Ханка, Приморский кр.). B. Остаток Щелочи, выпавШий кристаллами на поверхности личинки (Unio dembeae, р. Дуко, ЭфиопиЯ). D. Капли раствора Щелочи (укаЗаны стрелками) на поверхности Шипов крючка (Nodularia douglasiae, р. Гион, о-в Хонсю, ЯпониЯ). МасШтаб 5 мкм (А, С), 2 мкм (B, D). Микроскоп Zeiss MERLIN, напыление углеродом (А, В), хромом (С, D). FIG. 7. Insufficient rinsing of glochidia after cleaning in alkali (5% KOH). A, C. «Blurredness» of the exterior valve pores (Cristaria tuberculata, Khanka Lake, Primorsky Krai). B. Precipitation of alkali crystals on the exterior glochidia surface (Unio dembeae, Duko River, Ethiopia). D. Drops of alkali (indicated by arrows) on the hook spines (Nodularia douglasiae, Gion River, Honshu Island, Japan). Scale bars 5 μm (A, C), 2 μm (B, D). Zeiss MERLIN microscope, sputter coating with carbon (A, B) and chromium (C, D).
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
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DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.