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174
datasets available to search
ShareScore release 0.9.0
Dataset results
174 results for “Single-cell omics”
Single-cell multi-omic integration compares and contrasts features of brain cell identity
GEO Series GSE126836. Mus musculus; Homo sapiens. 50 samples. Type: Expression profiling by high throughput sequencing.
Deciphering cell states and genealogies of human hematopoiesis with single-cell multi-omics [Crispr_Mouse_Batch1]
GEO Series GSE259284. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-cell multi-omics profiling reveals key regulatory mechanisms that poise germinal vesicle oocytes for maturation in pigs
GEO Series GSE234116. Sus scrofa. 55 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell and Spatial Multi-Omics Reveal Mechanical Stress Driving Heterogeneous Xylem Development in Populus [LCM Spatial RNA-seq]
GEO Series GSE295131. Populus trichocarpa. 18 samples. Type: Expression profiling by high throughput sequencing.
Multi-omic analysis by single-cell sequencing of epigenomic state in pediatric H3K27M gliomas
GEO Series GSE210568. Homo sapiens. 61 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Spatially resolved multi-omics single-cell analyses inform mechanisms of immune-dysfunction in pancreatic cancer
GEO Series GSE205354. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Cellular states, clonal dynamics, and evolution in Pearson syndrome revealed via single-cell multi-omics [Celline_scATAC]
GEO Series GSE173930. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell multi-omics reveals the TNF-α activation threshold for Classical Monocytes by studying healthy donors and rheumatoid arthritis patients
GEO Series GSE289019. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing; Other.
Single-cell multi-omics analysis revealing immune features of inactivated SARS-CoV-2 vaccination in systemic lupus erythematosus patients
GEO Series GSE224198. Homo sapiens. 26 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-cell omics reveal human blood mononuclear CD14+ and/or CD1c+ cell heterogeneity
GEO Series GSE151087. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
Single-cell and spatial multi-omics highlight effects of anti-integrin therapy across cellular compartments in ulcerative colitis
GEO Series GSE250498. Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing; Other.
Single-cell and spatial multi-omics highlight effects of anti-integrin therapy across cellular compartments in ulcerative colitis [biopsy scRNA-seq]
GEO Series GSE250487. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Cellular states, clonal dynamics, and evolution in Pearson syndrome revealed via single-cell multi-omics [BMMNC_scATAC_ASAP]
GEO Series GSE173933. Homo sapiens. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Deciphering cell states and genealogies of human hematopoiesis with single-cell multi-omics [Extended donors]
GEO Series GSE261078. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
scONE-seq: A one-tube single-cell multi-omics method enables simultaneous dissection of genotype and phenotype heterogeneity from frozen tumor samples
GEO Series GSE185269. Homo sapiens. 621 samples. Type: Expression profiling by high throughput sequencing; Other.
Single-cell multi-omics of mitochondrial DNA disorders reveals dynamics of purifying selection across human immune cells
GEO Series GSE173936. Homo sapiens. 52 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Single-cell, multi-omic analysis identifies regulatory programs in mixed phenotype acute leukemia
GEO Series GSE139369. Homo sapiens. 38 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
Single-cell multi-omic detection of DNA methylation and histone modifications reconstructs the dynamics of epigenetic maintenance
GEO Series GSE232637. Homo sapiens; Mus musculus. 42 samples. Type: Methylation profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Single-cell multi-omic analysis of the vestibular schwannoma ecosystem uncovers a nerve injury-like state [scATAC-seq]
GEO Series GSE216782. Homo sapiens. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell multi-omics profiling links dynamic DNA methylation to cell fate decisions during early mammalian organogenesis [10X_Dnmt]
GEO Series GSE204906. Mus musculus. 18 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.