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558 results for “Species interactions”
Data & R code for: Paquette & Hargreaves 'Biotic interactions are more often important at species' warm vs. cool range edges'
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Data from: Shifting seagrass-oyster interactions alter species response to ocean warming and acidification
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The past, present, and future of predator-prey interactions in a warming world: using species distribution modeling to forecast ectotherm-endotherm niche overlap
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Deciphering the interactions between plant species and their main fungal root pathogens in mixed grassland communities
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Host species differences in the thermal mismatch of host–parasitoid interactions
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Explaining the divergence of population trajectories for two interacting waterfowl species
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Data from: Abundant top predators increase species interaction network complexity in Northeastern Chinese forests
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The role of climate and species interactions in determining the distribution of two elevationally segregated species of small mammals through time
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Stable species and interactions in plant-pollinator networks deviate from core position in fragmented habitats
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Host-enemy interactions provide limited biotic resistance for a range-expanding species via reduced apparent competition
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Data for: Resetting our expectations for parasites and their effects on species interactions: A meta-analysis
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Data for: Eco-evolutionary interactions with multiple evolving species reveal both antagonistic and additive effects
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Data from: Linking microenvironment modification to species interactions and demography in an alpine plant community
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SGS-LTER Ecosystem Stress Area - Aboveground Biomass: Interactions between individual plant species and soil nutrient status in shortgrass steppe on the Central Plains Experimental Range in Nunn, Colorado, USA 1991
This data package was produced by researchers working on the Shortgrass Steppe Long Term Ecological Research (SGS-LTER) Project, administered at Colorado State University. Long-term datasets and background information (proposals, reports, photographs, etc.) on the SGS-LTER project are contained in a comprehensive project collection within the Digital Collections of Colorado (http://digitool.library.colostate.edu/R/?func=collections&collection_id=3429). The data table and associated metadata document, which is generated in Ecological Metadata Language, may be available through other repositories serving the ecological research community and represent components of the larger SGS-LTER project collection. The effect of plant community structure on nutrient cycling is fundamental to our understanding of ecosystem function. We examined the importance of plant species and plant cover (i.e. plant covered microsites vs bare soil) on nutrient cycling in shortgrass steppe of northeastern Colorado. We tested the effects of both plant species and cover on soils in an area of undisturbed shortgrass steppe and an area that had undergone nitrogen and water additions from 1971 to 1974, resulting in significant shifts in plant species composition.
SGS-LTER Ecosystem Stress Area - Belowground Biomass: Interactions between individual plant species and soil nutrient status in shortgrass steppe on the Central Plains Experimental Range in Nunn, Colorado, USA 1991
This data package was produced by researchers working on the Shortgrass Steppe Long Term Ecological Research (SGS-LTER) Project, administered at Colorado State University. Long-term datasets and background information (proposals, reports, photographs, etc.) on the SGS-LTER project are contained in a comprehensive project collection within the Digital Collections of Colorado (http://digitool.library.colostate.edu/R/?func=collections&collection_id=3429). The data table and associated metadata document, which is generated in Ecological Metadata Language, may be available through other repositories serving the ecological research community and represent components of the larger SGS-LTER project collection. The effect of plant community structure on nutrient cycling is fundamental to our understanding of ecosystem function. We examined the importance of plant species and plant cover (i.e. plant covered microsites vs bare soil) on nutrient cycling in shortgrass steppe of northeastern Colorado. We tested the effects of both plant species and cover on soils in an area of undisturbed shortgrass steppe and an area that had undergone nitrogen and water additions from 1971 to 1974, resulting in significant shifts in plant species composition. Additional information and referenced materials can be found: http://hdl.handle.net/10217/83317.
Data from: Antagonistic species interaction drives selection for sex in a predator-prey system
<p>The evolutionary maintenance of sexual reproduction has long challenged biologists as the majority of species reproduce sexually despite inherent costs. Providing a general explanation for the evolutionary success of sex has thus proven difficult and resulted in numerous hypotheses. A leading hypothesis suggests that antagonistic species interaction can generate conditions selecting for increased sex due to the production of rare or novel genotypes that are beneficial for rapid adaptation to recurrent environmental change brought on by antagonism. To test this ecology-based hypothesis, we conducted experimental evolution in a predator (rotifer) - prey (algal) system by using continuous cultures to track predator-prey dynamics and in-situ rates of sex in the prey over time and within replicated experimental populations. Overall, we found that predator-mediated fluctuating selection for competitive versus defended prey resulted in higher rates of genetic mixing in the prey. More specifically, our results showed that fluctuating population sizes of predator and prey, coupled with a trade-off in the prey, drove the sort of recurrent environmental change that could provide a benefit to sex in the prey, despite inherent costs. We end with a discussion of potential population genetic mechanisms underlying increased selection for sex in this system, based on our application of a general theoretical framework for measuring the effects of sex over time, and interpreting how these effects can lead to inferences about the conditions selecting for or against sexual reproduction in a system with antagonistic species interaction.</p>
Data from: The stronger, the better – trait hierarchy is driving alien species interaction
Multiple invaders commonly co-occur in native ecosystems and in some cases have been shown to facilitate each other thus exacerbating impacts on native species, while in other cases one invader may reduce the impact of another due to competition. We therefore aimed at identifying mechanisms driving alien species interactions. We conducted a common garden experiment investigating all pairwise combinations of 20 alien annual plant species in Germany. We first tested whether competition or facilitation occurred more often. Secondly, we determined whether individual traits, hierarchical or absolute trait distances, multivariate trait or phylogenetic distance explained alien plant interactions best. Thirdly, we assessed whether accounting for trait plasticity explains plant performance better than species-level trait averages. While the magnitude of interspecific competition compared to intraspecific competition was on average larger across the 190 alien species combinations, interspecific facilitation still occurred in 24% of cases. Interactions could be better explained by hierarchical trait distances which reflect competitive ability, compared to phylogenetic and multivariate trait distance (reflecting niche differences). This finding supports criticisms about the applicability of testing limiting similarity versus environmental filtering and the community phylogenetic approach. Specifically, when growing taller and having a lower specific leaf area than the co-occurring alien neighbour, biomass and seed number of individuals in mixture increased compared to growing alone. Effects of seed mass, root:shoot ratio and flowering time depended on the performance measure. In contrast to recent suggestions, accounting for trait plasticity did not necessarily explain plant performance better than models using species-level trait averages. These results advance our fundamental understanding of trait-interaction relationships, strengthening recent findings on the importance of competitive hierarchy in shaping interactions and community structure. In particular, applying these concepts to the novel case of alien-alien interactions, is crucial given the continuing accumulation of alien species around the globe.
Data from: Land-use change interacts with climate to determine elevational species redistribution
Climate change is driving global species redistribution with profound social and economic impacts. However, species movement is largely constrained by habitat availability and connectivity, of which the interaction effects with climate change remain largely unknown. Here we examine published data on 2798 elevational range shifts from 43 study sites to assess the confounding effect of land-use change on climate-driven species redistribution. We show that baseline forest cover and recent forest cover change are critical predictors in determining the magnitude of elevational range shifts. Forest loss positively interacts with baseline temperature conditions, such that forest loss in warmer regions tends to accelerate species' upslope movement. Consequently, not only climate but also habitat loss stressors and, importantly, their synergistic effects matter in forecasting species elevational redistribution, especially in the tropics where both stressors will increase the risk of net lowland biotic attrition.
Data from: Interactions between seed-dispersing ant species affect plant community composition in field mesocosms
<p>1. In generalized mutualisms, species vary in the quality of services they provide to their partners directly via traits that affect partner fitness and indirectly via traits that influence interactions with mutualist species that play similar functional roles. Myrmecochory, or seed dispersal by ants, is a generalized mutualism with ant species varying in the quality of dispersal services they provide to their plant partners. Variation in ant species identity can directly impact seed dispersal patterns and plant community composition; however, we know less about how interactions among seed-dispersing ant species indirectly influence plant partners.</p> <p>2. The invasive ant, <i>Myrmica rubra,</i> is a high-quality seed-disperser in its native range and interacts with myrmecochores (ant-dispersed plants) and the high-quality seed disperser <i>Aphaenogaster </i>sp. in its invaded range. We use this system to examine how interactions between two functionally similar mutualist ant species influence the recruitment and community composition of ant-dispersed plants.</p> <p>3. We performed a field mesocosm experiment and a lab behavioral experiment to compare discovery and dominance behaviors between ant species, and seed dispersal and seedling recruitment of four myrmecochore species among intraspecific interaction treatments of each ant species and an interspecific interaction treatment.</p> <p>4. We found that <i>M. rubra</i> was better at discovering and dispersing seeds, but that <i>Aphaenogaster</i> sp. was dominantly aggressive over <i>M. rubra</i>. Interspecific interactions dampened seed dispersal relative to dispersal by the better disperser. Despite this dampening, we found no effect of interspecific interaction on seedling recruitment. However, community composition of seedlings in the interspecific interaction treatment was more similar to composition in the aggressively dominant ant (<i>Aphaenogaster </i>sp.) treatment than in the better discoverer ant (<i>M. rubra</i>) treatment.</p> <p>5. We show that interspecific interaction between mutualist species in the same functional guild affects the outcome of mutualistic interactions with partner species. Despite the native ant dispersing fewer seeds, its dominance over the subordinate (invasive) ant has the potential to allow for some level of biotic resistance against the effects of M. rubra on plant communities when these species co-exist.</p>
Trade-offs between seed size and biotic interactions contribute to coexistence of co-occurring species that vary in fecundity
<p>Despite theoretical advances, the ecological factors and functional traits that enable species varying in seed size and fecundity to coexist remain unclear. Given inherent fecundity advantages, why don't small-seeded species dominate communities?</p> <p>In perennial grasslands, we evaluated whether small-seeded species are less tolerant of competition from the community dominant bunchgrass than large-seeded species but also less vulnerable to seed predation by mice. We also explored whether trade-offs involving competitive tolerance include two other functional traits, height and leaf mass per area (LMA). We added seeds of 17 forb species to plots where bunchgrass competition and rodent seed predation were manipulated across sites varying in bunchgrass productivity and thus competitive intensity. Seeds were added at densities mimicking interspecific variation in fecundity among target species.</p> <p>Standardizing for differences in fecundity (i.e. seed input; which enabled us to evaluate inherent interspecific differences in susceptibility to biotic interactions), bunchgrass competition more greatly reduced recruitment and establishment of small vs. large-seeded species, whereas rodent seed predation more greatly reduced the recruitment of large- versus small-seeded species. Plant height and LMA were unrelated to the competition effect size.</p> <p>Small-seeded species abundance decreased across sites increasing in bunchgrass productivity, whereas this was not the case for large-seeded species. For adult plants but not seedlings, community weighted functional trait means (CWM) for seed size, height, and LMA increased in plots with versus without bunchgrass competition and the CWM for seed size and height also increased at sites with greater bunchgrass productivity (for adults only). In contrast, rodent seed predation had no significant effects on CWM seed size.</p> <p>At the end of the experiment, adult abundance positively correlated with plant fecundity in plots lacking bunchgrass, indicating the inherent advantages accrued to high fecundity small-seeded species. However, with bunchgrass competition, abundances were equalized across species due to reduced competitive tolerance of high fecundity small-seeded species.</p> <p>Synthesis: Our results suggest that coexistence among subordinate forb species varying in seed size and fecundity is in-part due to a trade-off involving competitive tolerance and fecundity, mediated by seed size and associated functional traits.</p>
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.