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116
datasets available to search
ShareScore release 0.9.0
Dataset results
116 results for “Stem Map”
Genome-wide maps of five major transcription factors in epiblast stem cells
GEO Series GSE74636. Mus musculus. 11 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Continuous map of early hematopoietic stem cell differentiation across human lifetime
<p>This repository contains scCITEseq data generated from healthy stem and progenitor cells using the BD Rhapsody Single-Cell Analysis System.</p> <p><strong>File description:</strong></p> <p>1. RSEC-adjusted UMI count files generated using the BD Rhapsody Targeted Analysis Pipeline (v. 1.10 v. 1.10.1):</p> <ul> <li>Experiment_1_RSEC_MolsPerCell</li> <li>Experiment_2_RSEC_MolsPerCell</li> <li>Experiment_3_RSEC_MolsPerCell</li> <li>Experiment_4_RSEC_MolsPerCell</li> <li>Experiment_5_RSEC_MolsPerCell</li> <li>Experiment_6_RSEC_MolsPerCell</li> <li>Experiment_7_RSEC_MolsPerCell</li> <li>Experiment_8_RSEC_MolsPerCell</li> <li>Experiment_9_RSEC_MolsPerCell</li> <li>Experiment_10_RSEC_MolsPerCell<br><br></li> </ul> <p>2. Sample tag calls for each putative cell, output by the BD Rhapsody Targeted Analysis Pipeline (v. 1.10 v. 1.10.1):</p> <ul> <li>Experiment_1_Sample_Tag_Calls</li> <li>Experiment_2_Sample_Tag_Calls</li> <li>Experiment_3_Sample_Tag_Calls</li> <li>Experiment_4_Sample_Tag_Calls</li> <li>Experiment_5_Sample_Tag_Calls</li> <li>Experiment_6_Sample_Tag_Calls</li> <li>Experiment_7_Sample_Tag_Calls</li> <li>Experiment_8_Sample_Tag_Calls</li> <li>Experiment_9_Sample_Tag_Calls</li> <li>Experiment_10_Sample_Tag_Calls<br><br></li> </ul> <p>3. An excel file with all samples processed (cell type isolated, age group)</p> <ul> <li>Sample list</li> </ul> <p> </p>
Mapping of Tumor Stem Cells in the Resection Marigin During Extirpation of Highly Malignant Gliomas Using GlioStem
ClinicalTrials.gov study NCT05556486. IPD Sharing: NO. Countries: 1. Publications: 0.
Genome-wide mapping of open chromatin in mouse embryonic stem cell
GEO Series GSE50706. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide mapping of 5-hydroxymethylcytosine in embryonic stem cells
GEO Series GSE28682. Mus musculus. 9 samples. Type: Methylation profiling by high throughput sequencing; Other.
A modular differentiation system maps multiple human kidney lineages from pluripotent stem cells [scRNA-Seq]
GEO Series GSE146118. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide maps of YAP target chromatin loci in mouse pluripotent stem cells
GEO Series GSE157705. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Multiplex mapping of chromatin accessibility and DNA methylation within targeted single molecules identifies epigenetic heterogeneity in neural stem cells and glioblastoma
GEO Series GSE50047. Homo sapiens. 4 samples. Type: Methylation profiling by high throughput sequencing.
Genome wide map of High-salt Recovered Sequences (HRS) in mouse embryonic stem cells (ESC)
GEO Series GSE106751. Mus musculus. 9 samples. Type: Other; Genome binding/occupancy profiling by high throughput sequencing.
Single cell trajectory mapping of human pluripotent stem cells differentiating towards lung and hepatocyte progenitors
GEO Series GSE167011. Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing.
Stage-specific human induced pluripotent stem cells map the progression of myeloid transformation to transplantable leukemia
GEO Series GSE92494. Homo sapiens. 11 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide maps of H3K27me3 in chromatin state in embryonic stem cells differentiated motor neurons
GEO Series GSE114283. Mus musculus. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Mapping Human Hematopoietic Stem Cells From Hemogenic Endothelium To Birth
GEO Series GSE162950. Homo sapiens. 28 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide mapping of Klf4 and Klf5 in pluripotent mouse embryonic stem cells (ESCs)
GEO Series GSE49848. Mus musculus. 5 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Module map of stem cell genes guides creation of epithelial cancer stem cells
GEO Series GSE10423. Homo sapiens. 16 samples. Type: Genome variation profiling by array.
Genome-wide maps of H3K9me3 in hematopoietic stem cells from Kdm4a, b, c triple knockout mice
GEO Series GSE129156. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Third-party reanalysis.
Genome-wide mapping of hnRNPA2B1 binding in human adipose derived stem cells isolated from gluteofemoral (GF) subcutaneous adipose tissue
GEO Series GSE201597. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide maps of chromatin state in human adipose derived stem cells isolated from abdominal (abd) and gluteofemoral (glut) subcutaneous adipose tissue
GEO Series GSE224770. Homo sapiens. 172 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide maps of EED binding genes in WT and JARID2 KO human embryonic stem cells (hESCs)
GEO Series GSE149351. Homo sapiens. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Comprehensive mapping of transcriptional networks specifying lactogenic differentiation of murine mammary epithelial stem like cells
GEO Series GSE107419. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.