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Dataset results
95 results for “Viral genome”
Genomic profiling of HIV-1 integration in microglia cells links viral integration to the topologically associated domains
GEO Series GSE223638. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing; Other.
Cellular states are coupled to genomic and viral heterogeneity in HPV-related oropharyngeal carcinoma
GEO Series GSE182227. Homo sapiens. 24 samples. Type: Expression profiling by high throughput sequencing.
Full genome viral sequences inform patterns of SARS-CoV-2 spread into and within Israel
<p>Beast2 outputs for the analysis in the submitted manuscript. </p>
12 fungal-associated viral genomes for review
Open the record for dataset details and reuse information.
Viral-dectection bacterial genomes dataset (TargetCall-D3)
<p>Detailed description:</p> <p>The fast5 files in this dataset is generated from ONT machine.</p> <p>This dataset includes the 72567 fast5 files sampled from paper: Performance of Neural Network Basecalling Tools for Oxford Nanopore Sequencing</p>
The three-dimensional structure of the EBV genome plays a crucial role in regulating viral gene expression in EBVaGC [HiChIP]
GEO Series GSE239992. Homo sapiens; human gammaherpesvirus 4. 4 samples. Type: Other.
Genome-wide profiling of cervical RNA-binding proteins identified HPV regulation of RNASEH2A expression by viral E7 and E2F1
GEO Series GSE113942. Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing.
Viral oncogene manipulates YY1 to alter host 3D genome organization and promote B cell proliferation
GEO Series GSE277748. Homo sapiens. 26 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Human Papillomavirus Genomes Associate with Active Host Chromatin during Viral Genome Maintenance [Hi-C]
GEO Series GSE294037. Homo sapiens. 2 samples. Type: Other.
Efficient transgene-free multiplexed genome editing via viral delivery of an engineered TnpB
GEO Series GSE316183. Escherichia coli. 1 samples. Type: Expression profiling by high throughput sequencing.
The three-dimensional structure of the EBV genome plays a crucial role in regulating viral gene expression in EBVaGC [ChIP-seq]
GEO Series GSE239987. human gammaherpesvirus 4. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Human Papillomavirus Genomes Associate with Active Host Chromatin during Viral Genome Maintenance [ATAC-seq]
GEO Series GSE294064. Homo sapiens. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide map of viral transcription factor ORF34 binding in Kaposi's Sarcoma Herpesvirus (KSHV)
GEO Series GSE126601. Homo sapiens; Human gammaherpesvirus 8. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Defective Epstein-Barr Virus Genomes and Atypical Viral Gene Expression in B-Cell Lines Derived from Multiple Myeloma Patients
GEO Series GSE165196. Homo sapiens. 17 samples. Type: Expression profiling by high throughput sequencing; Other.
Pol2 occupancy of the viral and host genomes in HCMV infected Kasumi-3 cells at 24 hpi
GEO Series GSE164845. Homo sapiens; Human betaherpesvirus 5. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
N6-methyladenosine modification is not a general trait of viral RNA genomes.
GEO Series GSE231739. Homo sapiens; Dengue virus; Chikungunya virus. 8 samples. Type: Other.
Nuclear Lamina binds the EBV genome during latency and regulates viral gene expression
GEO Series GSE198413. Homo sapiens; human gammaherpesvirus 4. 14 samples. Type: Expression profiling by high throughput sequencing; Other.
Pol2 and H3K27Ac and H3K27me3 occupancy of the viral and host genomes in HCMV infected Kasumi-3 cells at 24 hpi
GEO Series GSE164842. Homo sapiens; Human betaherpesvirus 5. 21 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
A microreactor system for point-of-care viral genome sequencing
GEO Series GSE297440. Sus scrofa domesticus. 17 samples. Type: Other.
Herpesviruses mimic zygotic genome activation to promote viral replication
GEO Series GSE272015. Homo sapiens. 13 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.