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86
datasets available to search
ShareScore release 0.9.0
Dataset results
86 results for “Xenium”
Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using high definition spatial profiling [Xenium]
GEO Series GSE280314. Homo sapiens. 3 samples. Type: Other.
Multiscale topology classifies and quantifies cell types in subcellular spatial transcriptomics [Xenium]
GEO Series GSE264334. Homo sapiens. 1 samples. Type: Other.
Transcriptomic landscape of the anterior thalamic nuclei of the mouse [Xenium]
GEO Series GSE255953. Mus musculus. 7 samples. Type: Other.
HIF-1α+ CD4 T cells coordinate a tissue resident immune cell network in the lung [Xenium]
GEO Series GSE291539. Mus musculus. 2 samples. Type: Other.
Multi-omic characterization of human sural nerves across polyneuropathies [Xenium]
GEO Series GSE285984. Homo sapiens. 8 samples. Type: Other.
Inhibiting LSD1 unlocks retinoid AP-1 programming to activate epithelial immunity and skin tumor suppression [Xenium CreERT]
GEO Series GSE302474. Mus musculus. 2 samples. Type: Other.
Xenium Spatial Transcriptomics with human breast cell typing panel in human treatment naïve primary PDAC
GEO Series GSE280634. Homo sapiens. 8 samples. Type: Other.
Inhibiting LSD1 unlocks retinoid AP-1 programming to activate epithelial immunity and skin tumor suppression [Xenium embryo]
GEO Series GSE302470. Mus musculus. 2 samples. Type: Other.
Multimodal spatial transcriptomic characterization of mouse kidney injury and repair [Xenium]
GEO Series GSE269719. Mus musculus. 12 samples. Type: Other.
Inhibiting LSD1 unlocks retinoid AP-1 programming to activate epithelial immunity and skin tumor suppression [Xenium tumor]
GEO Series GSE302473. Mus musculus. 2 samples. Type: Other.
Xenium human Brain Micrometastasis - 2nd batch
<p>This repository contains (1) all Xenium outputs as .zip files, (2) CD31 immunohistochemistry (IHC) staining in .czi format and the (3) .rds files related to 2 tissue sections from 2 human donors analysed by Xenium. Xenium and IHC were performed in sequential tissue sections from the same blocks. These datasets belong to a larger study to understand vascular co-option in brain micro-metastasis (Pedro García-Gómez et al., 2024). Please visit <a href="https://github.com/smorabit/Micromets_Xenium">https://github.com/smorabit/Micromets_Xenium</a> to obtain further information about the code and analysis pipeline used.</p> <p>This dataset is available through Zenodo for <strong>academic non-commercial use</strong> <strong>only</strong>. To request access, you must use your work/university email address and must submit the following details to <a href="mailto:ctc.peace@ucl.ac.uk">ctc.peace@ucl.ac.uk</a>:</p> <ul> <li> <ul> <li>Your Full Name, Role and Affiliated Institution</li> <li>An overview of your intended use of the dataset</li> <li>Acknowledgement of the restrictions for academic non-commercial use only</li> </ul> </li> </ul> <p>Access Request will be reviewed by the Data Access Committee (<a href="mailto:ctc.peace@ucl.ac.uk">ctc.peace@ucl.ac.uk</a>)</p> <p>The dataset can only be used by the applicants named on the application and for the intended use specified in the request. <strong>Copying or redistribution of this dataset is strictly prohibited.</strong></p> <p> </p>
Transcript_Data_for_Xenium_BRCA
<p><strong>Transcript Data for Xenium BRCA</strong></p>
Blood Compatibility Characteristics of Baxter Xenium+, Fresenius FX and Gambro Polyflux Dialyzers
ClinicalTrials.gov study NCT01273870. IPD Sharing: Not stated. Countries: 0. Publications: 0.
Xenium spatial transcriptomics of human carotid artery plaques
GEO Series GSE294466. Homo sapiens. 32 samples. Type: Other.
A Deep Dive into the Functional and Spatial Heterogeneity of Lung Interstitial Macrophages [Xenium]
GEO Series GSE293144. Mus musculus. 2 samples. Type: Other.
Xenium In Situ analysis of mouse skin mock-treated or treated with SspA and HDM
GEO Series GSE310658. Mus musculus. 2 samples. Type: Other.
Xenium-based spatial transcriptomics of brains following chronic plastic exposure
GEO Series GSE291378. Mus musculus. 3 samples. Type: Other.
Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus [Xenium]
GEO Series GSE280460. Homo sapiens. 13 samples. Type: Other.
PHLOWER - Single cell trajectory analysis using Decomposition of the Hodge Laplacian [Xenium]
GEO Series GSE302264. Homo sapiens. 4 samples. Type: Other.
Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails
GEO Series GSE313338. Ambystoma mexicanum. 25 samples. Type: Other.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.