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126
datasets available to search
ShareScore release 0.9.0
Dataset results
126 results for “brain atlas”
A single-cell transcriptome atlas of the ageing Drosophila brain
GEO Series GSE107451. Drosophila melanogaster. 128 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Transcriptomic atlas and interaction networks of brain cells in mouse CNS demyelination and remyelination
GEO Series GSE204770. Mus musculus. 26 samples. Type: Expression profiling by high throughput sequencing.
A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain
GEO Series GSE246717. Mus musculus. 781 samples. Type: Expression profiling by high throughput sequencing.
Melanoma Brain Metastasis Atlas [patient_cell_lines_RNA-seq]
GEO Series GSE200217. Homo sapiens. 24 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic atlas and interaction networks of brain cells in mouse CNS demyelination and remyelination [B6]
GEO Series GSE204755. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Single-cell atlas of the human brain vasculature across development, adulthood and disease (bulk RNA-Seq)
GEO Series GSE256492. Homo sapiens. 31 samples. Type: Expression profiling by high throughput sequencing.
Melanoma Brain Metastasis Atlas [TCR-Seq]
GEO Series GSE200215. Homo sapiens. 5 samples. Type: Expression profiling by high throughput sequencing.
Crnic Institute Human Trisome Project - Trisomy 21 Model Atlas: PolyA RNA-seq from 6-month old mouse brain hippocampus tissue ± JAK1/3 inhibition with tofacitinib
GEO Series GSE272694. Mus musculus. 34 samples. Type: Expression profiling by high throughput sequencing.
Single-cell atlas of the human brain vasculature across development, adulthood and disease (Extra Individuals)
GEO Series GSE256491. Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing.
A Single-Cell Atlas of Cell Types, States, and Other Transcriptional Patterns from Nine Regions of the Adult Mouse Brain
GEO Series GSE116470. Mus musculus. 104 samples. Type: Expression profiling by high throughput sequencing.
BrainSTEM: A multi-resolution fetal brain atlas to assess the fidelity of human midbrain cultures
GEO Series GSE281535. Homo sapiens. 48 samples. Type: Expression profiling by high throughput sequencing.
Non-small Cell Lung Cancer Brain Metastasis Atlas
GEO Series GSE223503. Homo sapiens. 136 samples. Type: Expression profiling by high throughput sequencing; Other.
A spatio-temporal brain miRNA expression atlas identifies sex-independent age-related microglial driven miR-155-5p increase [brain regions]
GEO Series GSE282205. Mus musculus. 1009 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Crnic Institute Human Trisome Project - Trisomy 21 Model Atlas: PolyA RNA-seq from C57BL/6 and Dp16 adult mouse brain tissue ± JAK1/2 inhibition with baricitinib
GEO Series GSE229997. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Crnic Institute Human Trisome Project - Trisomy 21 Model Atlas: PolyA RNA-seq from adult mouse brain cortex
GEO Series GSE272568. Mus musculus. 18 samples. Type: Expression profiling by high throughput sequencing.
DNA Methylation Atlas of the Mouse Brain at Single-Cell Resolution
GEO Series GSE132489. Mus musculus. 0 samples. Type: Methylation profiling by high throughput sequencing.
Transcriptomic atlas and interaction networks of brain cells in mouse CNS demyelination and remyelination [Trem2KO]
GEO Series GSE204769. Mus musculus. 18 samples. Type: Expression profiling by high throughput sequencing.
A single-cell atlas of mouse brain macrophages reveals unique transcriptional identities shaped by ontogeny and tissue environment. [scRNA-Seq]
GEO Series GSE128854. Mus musculus. 15 samples. Type: Expression profiling by high throughput sequencing.
Gene expression atlas of energy balance brain regions
GEO Series GSE178290. Mus musculus. 70 samples. Type: Expression profiling by high throughput sequencing.
A molecular brain atlas reveals cellular shifts during the repair phase of stroke
GEO Series GSE276202. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.