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468
datasets available to search
ShareScore release 0.9.0
Dataset results
468 results for “chromatin binding”
RNA Pol III transcriptomes and relationships to Pol II promoters, enhancer-binding factors and chromatin domains
GEO Series GSE20609. Homo sapiens. 10 samples. Type: Genome binding/occupancy profiling by genome tiling array.
SWI/SNF Chromatin Remodeling Complex Orchestrates Sequential Binding of Key Transcription Factors in B Cells and Restricts Aggressive Lymphoma [human CUT&RUN]
GEO Series GSE262094. Homo sapiens. 46 samples. Type: Other.
Chromatin binding protein PHF6 regulates activity-dependent transcription networks to promote hunger response [RNA-Seq]
GEO Series GSE139543. Mus musculus. 20 samples. Type: Expression profiling by high throughput sequencing.
Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position
GEO Series GSE47753. Homo sapiens. 13 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The chromatin remodeler ATRX binds to atypical chromatin domains at the 3’ exons of ZNF genes to preserve H3K9me3 enrichment
GEO Series GSE70920. Homo sapiens. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Opportunistic binding of EcR to open chromatin drives tissue-specific developmental responses [CUT&RUN]
GEO Series GSE202807. Drosophila melanogaster. 20 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Reduced chromatin binding of MYC is a key effect of HDAC inhibition in MYC amplified meduloblastoma [RNA-seq]
GEO Series GSE143379. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Chromatin-dependent binding of the S. cerevisiae HMGB protein Nhp6A affects nucleosome dynamics and transcription
GEO Series GSE23608. Saccharomyces cerevisiae. 15 samples. Type: Expression profiling by array; Genome binding/occupancy profiling by genome tiling array.
Identification of lineage-specific cis-regulatory modules associated with variation in transcription factor binding and chromatin activity using Ornstein-Uhlenbeck models
GEO Series GSE59706. Drosophila melanogaster; Drosophila pseudoobscura; Drosophila virilis. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Epigenetic marks and factors binding to chromatin in mouse embryonic stem cells
GEO Series GSE62864. Mus musculus. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Depletion of RUNX1/ETO in t(8;21) AML cells leads to genome-wide changes in chromatin structure and transcription factor binding
GEO Series GSE29225. Homo sapiens. 38 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by array; Methylation profiling by array.
Identification of Tox chromatin binding properties and of its downstream targets by DamID
GEO Series GSE64240. Homo sapiens; Mus musculus. 11 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Fractionation iCLIP detects persistent SR protein binding to conserved, retained introns in chromatin, nucleoplasm and cytoplasm
GEO Series GSE79792. Mus musculus. 21 samples. Type: Other.
Binding of TMPRSS2-ERG to BAF Chromatin Remodeling Complexes Mediates Prostate Oncogenesis.
GEO Series GSE110657. Homo sapiens. 50 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Chromatin remodeler ARID1A binds IRF3 to selectively induce antiviral interferon production in macrophages
GEO Series GSE176452. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
DNA G-quadruplexes are transcription factor binding hot spots in human chromatin
GEO Series GSE145090. Homo sapiens. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Third-party reanalysis.
Quantitative trait loci mapped for TCF21 binding, chromatin accessibility and chromosomal looping in coronary artery smooth muscle cells reveal molecular mechanisms of coronary disease loci [array]
GEO Series GSE150403. Homo sapiens. 15 samples. Type: SNP genotyping by SNP array; Genome variation profiling by SNP array.
Genome-wide maps of Meis1 and Hoxb13 chromatin binding in murine heart
GEO Series GSE141769. Mus musculus. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Poly(ADP-ribosyl)ation dependent changes in CTCF-chromatin binding and gene expression in breast cells
GEO Series GSE102237. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Human RNA polymerase III transcriptomes and relationships to Pol II promoter chromatin and enhancer-binding factors.
GEO Series GSE20309. Homo sapiens. 11 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.