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382
datasets available to search
ShareScore release 0.9.0
Dataset results
382 results for “chromatin structure”
Higher-order chromatin structures of chromosomally-integrated HHV-6A predict Integration Sites
GEO Series GSE162821. Human betaherpesvirus 6; Homo sapiens; Human betaherpesvirus 6A. 7 samples. Type: Other; Expression profiling by high throughput sequencing.
Allelic chromatin structure is a pervasive feature of imprinted domains and functions cooperatively with cis-acting long non-coding RNAs at the Mest-Copg2 locus [Capture Hi-C]
GEO Series GSE312071. Mus musculus. 14 samples. Type: Other.
Variable chromatin secondary structures in live cells revealed by radiation-induced spatially correlated DNA cleavage mapping [ATAC-Seq]
GEO Series GSE81736. Homo sapiens. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Wapl controls higher-order chromatin structure in interphase chromosomes
GEO Series GSE41603. Mus musculus. 24 samples. Type: Expression profiling by array; Genome binding/occupancy profiling by high throughput sequencing.
Hmga2 protein loss alters nuclear envelope and affects 3D chromatin structure upon the induction of pluripotent stem cell commitment [ChIP-seq]
GEO Series GSE200671. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Hi-TrAC reveals fine-scale chromatin structures organized by transcription factors
GEO Series GSE180175. Mus musculus; Homo sapiens. 136 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Responsiveness of genes to manipulation of transcription factors in ES cells is associated with chromatin structure and tissue specificity
GEO Series GSE22151. Mus musculus. 34 samples. Type: Expression profiling by array.
Sperm chromatin structure and reproductive fitness are altered by substitution of a single amino acid in mouse Protamine 1
GEO Series GSE225271. Mus musculus. 54 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
Hypersensitive Nucleosomes in Chromatin Are Intrinsic to the Structure of Active, Tissue-Specific Enhancers
GEO Series GSE57559. Mus musculus. 54 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Base pair resolution chromosome conformation capture reveals mechanistic insights into the nature of chromatin structure [TT-Seq]
GEO Series GSE281416. Mus musculus. 14 samples. Type: Expression profiling by high throughput sequencing.
Nuclear actin structure regulates chromatin accessibility [ATAC-seq]
GEO Series GSE242944. Mus musculus. 30 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
IMITATION SWITCH is required for normal chromatin structure and gene repression in PRC2 target domains
GEO Series GSE150758. Neurospora crassa. 94 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Chromatin structure signals of Nannochloropsis oceanica in response to nitrogen deprivation
GEO Series GSE223130. Nannochloropsis oceanica strain IMET1. 6 samples. Type: Other.
Temporal analysis suggests a reciprocal relationship between 3D chromatin structure and transcription [RNA-Seq]
GEO Series GSE201354. Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing.
Allelic chromatin structure is a pervasive feature of imprinted domains and functions cooperatively with cis-acting long non-coding RNAs at the Mest-Copg2 locus [RNA-seq]
GEO Series GSE312072. Mus musculus. 18 samples. Type: Expression profiling by high throughput sequencing.
Variable chromatin structure revealed by in situ spatially correlated DNA cleavage mapping
GEO Series GSE81807. Homo sapiens. 37 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The Dlk1-Dio3 noncoding RNA cluster coordinately regulates mitochondrial respiration and chromatin structure to establish proper cell state for muscle differentiation
GEO Series GSE272974. Mus musculus. 30 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Formaldehyde-Assisted Isolation of Regulatory Elements (FAIRE) Analysis Uncovers Broad Changes in Chromatin Structure Resulting from Hexavalent Chromium Exposure
GEO Series GSE56636. Mus musculus. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Hypersensitive Nucleosomes in Chromatin Are Intrinsic to the Structure of Active, Tissue-Specific Enhancers [ChIP-exo]
GEO Series GSE57556. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Extrachromosomal DNA Associates with Nuclear Condensates and Reorganizes Chromatin Structures to Enhance Oncogenic Transcription [RNA-seq]
GEO Series GSE275702. Homo sapiens. 20 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.