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191
datasets available to search
ShareScore release 0.9.0
Dataset results
191 results for “cis-regulatory element”
Looping of upstream cis-regulatory elements is required for CFTR expression in human airway epithelial cells [4C-seq]
GEO Series GSE138166. Homo sapiens. 16 samples. Type: Other.
UBN1/2 of HIRA complex is responsible for recognition and deposition of H3.3 at cis-regulatory elements of genes in mouse ES cells [RNA-seq]
GEO Series GSE117032. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Dynamic Activity in cis-Regulatory Elements of Leukocytes Identifies Transcription Factor Activation and Stratifies COVID-19 Severity in ICU Patients [RNA-seq]
GEO Series GSE221066. Homo sapiens. 55 samples. Type: Expression profiling by high throughput sequencing.
Identification of a novel Aire-regulating cis-regulatory element using H3K27ac ChIP-seq
GEO Series GSE74257. Mus musculus. 7 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
FOXP3 Expression Depends on Cell-Type Specific Cis-Regulatory Element and Transcription Factor Circuitry [mouse_Tconv_ChIP-seq]
GEO Series GSE305064. Mus musculus. 15 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
A cis-regulatory element of the PHYTOCHROME A gene confers the submergence escape capacity for amphibious plants
GEO Series GSE274369. Arabidopsis thaliana. 18 samples. Type: Expression profiling by high throughput sequencing.
Parallel characterization of cis-Regulatory Elements for Multiple Genes using CRISPRpath [ATAC-seq]
GEO Series GSE166834. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
An in vivo repertoire of zebrafish cardiomyocyte-specific cis-regulatory elements [ChIP-Seq]
GEO Series GSE252150. Danio rerio. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Transcription of mammalian cis-regulatory elements is restrained by actively enforced early termination [Hi-C]
GEO Series GSE66952. Mus musculus. 2 samples. Type: Other.
Link between GRHL2 Motifs and Intratumor Heterogeneity of Cis-Regulatory Elements Results in Poor Outcome in Luminal Breast Cancer: A Single-cell Chromatin Accessibility Analysis
GEO Series GSE198639. Homo sapiens. 16 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Arabidopsis Flower and Embryo Developmental Genes are Repressed in Seedlings by Different Combinations of Polycomb Group Proteins in Association with Distinct Sets of Cis-regulatory Elements
GEO Series GSE67322. Arabidopsis thaliana. 29 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Epigenetic Mapping of Cis-Regulatory Elements in the Developing Mouse and Pig Forelimbs.
GEO Series GSE277840. Sus scrofa; Mus musculus. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Transposons repressed by H3K27me3 were co-opted as cis-regulatory elements of H3K27me3 controlled protein-coding genes during evolution of plants
GEO Series GSE221635. Marchantia polymorpha; Cyanidioschyzon merolae strain 10D. 26 samples. Type: Expression profiling by high throughput sequencing.
Unique regulation of cis-regulatory elements facilitates reacquisition of pluripotency [RNA-seq]
GEO Series GSE117204. Mus musculus. 30 samples. Type: Expression profiling by high throughput sequencing.
ICE-A: A chromatin interaction-based tool for improved annotation of distal cis-regulatory elements reveals novel regulatory functions of lineage-restricted transcription factors in lymphocytic develo
GEO Series GSE279961. Mus musculus. 2 samples. Type: Other.
Genome-wide discovery of daily transcriptome, cis-regulatory elements and transcription factor footprints in the monarch butterfly brain [RNA-Seq]
GEO Series GSE122442. Danaus plexippus. 32 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide discovery of daily transcriptome, cis-regulatory elements and transcription factor footprints in the monarch butterfly brain
GEO Series GSE122447. Danaus plexippus. 39 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Transcription of mammalian cis-regulatory elements is restrained by actively enforced early termination [ChIP-Seq]
GEO Series GSE66951. Mus musculus. 24 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Cis-Regulatory Element Hijacking by Structural Variants Overshadows Topological Changes in Primary Prostate Cancer
GEO Series GSE164347. Homo sapiens. 34 samples. Type: Other.
Primate-specific Transcription Factors & Cis-Regulatory Elements Regulate Human Developmental Evolution.
GEO Series GSE181120. Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.