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ShareScore release 0.9.0
Dataset results
77 results for “deposition analysis”
Analysis of Lymph Node Metastasis and Tumor Deposit in the Short Gastric Mesentery Following Total Gastrectomy for Gastric Cancer
ClinicalTrials.gov study NCT06728878. IPD Sharing: UNDECIDED. Countries: 1. Publications: 0.
Growth, blood biochemistry, histology and transcriptomic profile analysis influences liver fat deposition and inflammation process following dietary supplementation of apple peel powder in Genetically
GEO Series GSE127810. Oreochromis niloticus. 9 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome Analysis of Fat Deposition in Buffalo at Different Stages
GEO Series GSE112744. Bubalus bubalis. 6 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.
Genome-wide analysis of H3K27me3 and H3K4me3 deposition in the fie mutant (h3k4me3_fie_col_seedlings_db)
GEO Series GSE24161. Arabidopsis thaliana. 8 samples. Type: Genome binding/occupancy profiling by genome tiling array.
Integrative 3D Genomics with Multi-Omics Analysis and Functional Validation of Genetic Regulatory Mechanisms of Abdominal Fat Deposition in Chickens (ATAC-seq).
GEO Series GSE255760. Gallus gallus. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide analysis of H3K27me3 and H3K4me3 deposition in the fie mutant (h3k27me3_wt_col_seedlings_db)
GEO Series GSE24160. Arabidopsis thaliana. 8 samples. Type: Genome binding/occupancy profiling by genome tiling array.
Comprehensive analysis of the SWR1 complex reveals the coupling of H2A.Z deposition with nucleosome sliding in Arabidopsis
GEO Series GSE139465. Arabidopsis thaliana. 34 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
Comprehensive analysis of the SWR1 complex reveals the coupling of H2A.Z deposition with nucleosome sliding in Arabidopsis [MNase-Seq]
GEO Series GSE139460. Arabidopsis thaliana. 8 samples. Type: Methylation profiling by high throughput sequencing.
Genome-wide analysis of H3K27me3 and H3K4me3 deposition in the fie mutant (h3k4me3_wt_col_seedlings_db)
GEO Series GSE24162. Arabidopsis thaliana. 8 samples. Type: Genome binding/occupancy profiling by genome tiling array.
Comprehensive analysis of the SWR1 complex reveals the coupling of H2A.Z deposition with nucleosome sliding in Arabidopsis [ChIP-Seq]
GEO Series GSE139459. Arabidopsis thaliana. 16 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide analysis of H3K27me3 and H3K4me3 deposition in the fie mutant (h3k27me3_fie_col_seedlings_db)
GEO Series GSE24159. Arabidopsis thaliana. 8 samples. Type: Genome binding/occupancy profiling by genome tiling array.
Integrative 3D Genomics with Multi-Omics Analysis and Functional Validation of Genetic Regulatory Mechanisms of Abdominal Fat Deposition in Chickens (Hi-C).
GEO Series GSE260559. Gallus. 6 samples. Type: Other.
Genome-wide analysis of H3K27me3 and H3K4me3 deposition in the fie mutant
GEO Series GSE24163. Arabidopsis thaliana. 32 samples. Type: Genome binding/occupancy profiling by genome tiling array.
Single-cell transcriptome analysis deciphers stem cell-like epithelial cells as metastatic phenotype and immune characteristics of tumor deposition positive in Colorectal Cancer
GEO Series GSE299737. Homo sapiens. 11 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide analysis of HMGA2 and H3K27me3 deposition in neocortical neural stem cells and transcriptome of Wild Type and Ring1 KO neocortical neural stem cells
GEO Series GSE86461. Mus musculus. 35 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Data and generating files for the manuscript "A Multi-Model Analysis of Solute Plume Behavior in a Synthetic Braided-River Deposit", submitted to Water Resources Research, August 2018.
<p>Data and generating files for the manuscript "A Multi-Model Analysis of Solute Plume Behavior in a Synthetic Braided-River Deposit", submitted to Water Resources Research, August 2018.</p> <p>This zipped folder contains the codes and data generated for the manuscript. The main routine for generating the ensembles is fidelity/run_fidelity.py. The folders 'dtgeostats', 'flowtrans', and 'hyvr' contain utilities for generating parameter fields and running flow-and-transport simulations. Note that the codes and data are provided as-is and relative pathways, etc. in the code may not function correctly. The data can be found in the fidelity/runfiles/braid005 directory and includes the outputs for the synthetic virtual reality (fidelity/runfiles/braid005/braid_vr) and the following model ensembles: object-based with no conditioning (fidelity/runfiles/braid005/braid_1a), object-based with soft conditioning (fidelity/runfiles/braid005/braid_1b), MPS (fidelity/runfiles/braid005/braid_2a/), isotropic multi-Gaussian (fidelity/runfiles/braid005/braid_3/isn/), and anisotropic multi-Gaussian (fidelity/runfiles/braid005/braid_3/ann/) .</p>
Which are the most frequently involved peripheral joints in calcium pyrophosphate crystal deposition at imaging? A Systematic Literature Review and meta-analysis by the OMERACT Ultrasound – CPPD subgroup
<p><strong>Objectives</strong>: To identify the prevalence of calcium pyrophosphate crystal deposition (CPPD) using ultrasound and conventional radiology at peripheral joints in patients with suspected or definite CPPD.</p> <p><strong>Methods: </strong>A systematic literature search was performed in PubMed and Embase using pre-defined search strategies from inception to April 2021 to identify studies that evaluated conventional radiology and ultrasound in detecting CPPD at peripheral joints, including definite or suspected CPPD [Research question 1 (RQ1) and Research Question 2 (RQ2), respectively]. For the meta-analysis, the first, second, and third sub-analysis included studies with the knee, and knee or wrist as the index joint for CPPD (without restrictions on the reference standard) and synovial fluid analysis or histology as a reference standard (without restrictions on the index joint), respectively.</p> <p><strong>Results: </strong>One-thousand eight hundred and twenty-seven manuscripts were identified, of which 94 articles were finally included. Twenty-two and seventy-two papers were included in RQ1 and RQ2, respectively. The knee had the highest prevalence for RQ1 and RQ2 by both conventional radiology and ultrasound, followed by the wrist with the highest prevalence for RQ1. The hand had the lowest CPPD prevalence. The third sub-analysis showed a higher CPPD prevalence on ultrasound than conventional radiology at the knee (only data available).</p> <p><strong>Conclusion: </strong>Among all peripheral joints, the knees and wrists could be regarded as the target joints for CPPD detection by imaging. Furthermore, ultrasound seems to detect a higher number of calcium pyrophosphate deposits than conventional radiology, even when using a more restrictive reference standard.</p>
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
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DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.