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112 results for “mangrove forest”
Field measurement data of hydrodynamic and morphological processes in the mangrove forest of Lac Bay, Bonaire, Caribbean Netherlands
<p>31-10-2024, Rik Gijsman</p> <p>_________________________________________________________<br>Dataset of field measurement of hydrodynamic and morphological processes in the mangrove forest of Lac Bay, Bonaire, Caribbean Netherlands.</p> <p>_________________________________________________________<br>For more information please see scientific publication:</p> <p>Gijsman, R., Engel, S., van der Wal, D., van Zee, R., Johnson, J., van der Geest, M., Wijnberg, K.M. and Horstman, E.M. (2024). <strong>The Importance of Tidal Creeks for Mangrove Survival on Small Oceanic Islands</strong>. <em>Unpublished Manuscript</em>.</p> <p>_________________________________________________________</p> <p>Dataset contains: </p> <ol> <li>Timeseries data from field instruments: <br> <ol> <li>Atmospheric pressure</li> <li>Water depth</li> <li>Water level</li> <li>Flow velocity</li> <li>Waves</li> <li>Turbidity</li> <li>Rainfall</li> <li>Temperature</li> <li>Wind</li> <li>Tidal creek flows</li> <li>Tidal creek transport</li> <li>Lagoon suspension</li> </ol> </li> <li>Mapped data of field surveys: <ol> <li>Bathymetry and creek profiles</li> <li>Sediment characteristics</li> </ol> </li> <li>Python script for importing and plotting data</li> <li>Overview map with shapefiles of instrument location coordinates</li> </ol> <p>________________________________________<br>Additional notes for your information:</p> <ul> <li>Timeseries data stored in .txt files</li> <li>Visualization of data in .txt files provided with accompanying .png files</li> <li>Timeseries data of Hobo sensors, Rain gauge and KNMI station interpolated between 19-01-2022 00:00:00 and 18-05-2022 23:55:00 (120 days) on 5 minute intervals </li> <li>Timeseries data of other sensors interpolated between 19-01-2022 00:00:00 and 08-03-2022 23:55:00 (49 days) on 5 minute intervals</li> <li>Column headers show instrument station abbreviation</li> <li>Datetime in local timezone of Bonaire (GMT-4)</li> <li>When a property (e.g., water depth) was measured by different instruments, the instrument used is mentioned in the file name, e.g. "water_depth_hobo.txt"</li> <li>Measurements from KNMI (The Royal Netherlands Meteorological Institute) station 990 were included in the dataset and indicated with '_knmi' in the file name. Data obtained from 'https://www.knmi.nl/nederland-nu/klimatologie/uurgegevens_Caribisch_gebied' </li> </ul> <p> </p>
FIGURE 3 in Wood-boring limnoriids (Crustacea, Isopoda) including a new species from mangrove forests of the Tukang Besi Archipelago, Indonesia
FIGURE 3. Lateral views of limnoriids from the Tukang Besi mangrove forests. A, Limnoria sellifera sp. nov.; B, Limnoria insulae; C, Limnoria unicornis; D, Limnoria pfefferi. Backscatter detector SEM images. Scale bars = 200 µm.
FIGURE 4 in Wood-boring limnoriids (Crustacea, Isopoda) including a new species from mangrove forests of the Tukang Besi Archipelago, Indonesia
FIGURE 4. Oblique dorsal views of pleonites and pleotelson. A, Limnoria sellifera sp. nov.; B, Limnoria pfefferi (note lorica of folliculinid on the right hand side of the pleotelson); C, Limnoria insulae; D, Limnoria unicornis. Backscatter detector SEM images. Scale bars = 100 µm in A and D, and 200 µm in B and C.
FIGURE 7. Uropods. A in Wood-boring limnoriids (Crustacea, Isopoda) including a new species from mangrove forests of the Tukang Besi Archipelago, Indonesia
FIGURE 7. Uropods. A, Limnoria sellifera sp. nov., lateral view; B, Limnoria unicornis, lateral view; C, Limnoria pfefferi; D, Limnoria insulae, oblique ventral view. Backscatter detector SEM images. Scale bars indicate 50, 50, 100 and 200 µm for A, B, C and D respectively.
FIGURE 6 in Wood-boring limnoriids (Crustacea, Isopoda) including a new species from mangrove forests of the Tukang Besi Archipelago, Indonesia
FIGURE 6. Detail of dorsal surface of pleotelson. A, Limnoria sellifera sp. nov.; B, Limnoria pfefferi; C, Limnoria unicornis; D, Limnoria insulae. Backscatter detector SEM images. Scale bars indicate 20 µm.
FIGURE 5 in Wood-boring limnoriids (Crustacea, Isopoda) including a new species from mangrove forests of the Tukang Besi Archipelago, Indonesia
FIGURE 5. Limnoria sellifera sp. nov. A, anteriorly pointing teeth on pleonites 2–5; B, lateral view of pleotelson; C, medial longitudinal carina of pleotelson; D, animal in burrow. A–C, backscatter SEM images, scales bars = 50, 100 and 20 µm for A, B and C respectively; D, stereo microscope image.
FIGURE 1 in Wood-boring limnoriids (Crustacea, Isopoda) including a new species from mangrove forests of the Tukang Besi Archipelago, Indonesia
FIGURE 1. Limnoria sellifera sp. nov. A–H, male, MZB Cru.Iso. 013, holotype: A, pleonite 2–5 and pleotelson, dorsal view (some setae omitted right side); B, distal articles of pereopod 1, lateral view; C, maxilliped; D, distal region of right mandible; E, medial region of pleonites 1–4; F, dorsal surface of pleotelson; G, posterior margin of pleotelson, dorsal view, H, uropod, lateral view. Scale: single bar = 50 µm, double bar = 100 µm.
FIGURE. Typical habitats of Ramalina species on northern South America. A. High paramo, Laguna Anteojos, Sierra Nevada de Merida, where grows on rocks R. anteojina at 4100 m. B. Sub-paramo (timberline), La Aguada, Sierra Nevada de Merida, 3100 m, where are found R. dictyota and R. reducta on shrubs. C. Andean cloud forest, La Victoria, Sierra Nevada de Merida where R. cochlearis, R. cumanensis and R. victoriana are found growing as epiphytes. D. Populations of R. usnea, R. morrocoyensis and R. paradisensis growing as epiphytes on mangroves and Suriana maritima at sea level, National Park Morrocoy, state Falcón; the latter two species are known only from this locality. E. Ramalina usnea is the only species of this genus reported from the Alto Orinoco, Amazonas, near La Esmeralda, 150 m, growing as corticolous in submontane forests, at the top of the picture the Cerro Duida. F. Xerophytic forests from the National Park Cerro Santa Ana, state Falcón, where Ramalina santanensis and R. microphylla are known only growing on soil and rocks at 200–400 m. Photos V. Marcano. in The genus Ramalina Acharius (Ascomycota, Lecanoromycetes, Ramalinaceae) in northern South America
FIGURE. Typical habitats of Ramalina species on northern South America. A. High paramo, Laguna Anteojos, Sierra Nevada de Merida, where grows on rocks R. anteojina at 4100 m. B. Sub-paramo (timberline), La Aguada, Sierra Nevada de Merida, 3100 m, where are found R. dictyota and R. reducta on shrubs. C. Andean cloud forest, La Victoria, Sierra Nevada de Merida where R. cochlearis, R. cumanensis and R. victoriana are found growing as epiphytes. D. Populations of R. usnea, R. morrocoyensis and R. paradisensis growing as epiphytes on mangroves and Suriana maritima at sea level, National Park Morrocoy, state Falcón; the latter two species are known only from this locality. E. Ramalina usnea is the only species of this genus reported from the Alto Orinoco, Amazonas, near La Esmeralda, 150 m, growing as corticolous in submontane forests, at the top of the picture the Cerro Duida. F. Xerophytic forests from the National Park Cerro Santa Ana, state Falcón, where Ramalina santanensis and R. microphylla are known only growing on soil and rocks at 200–400 m. Photos V. Marcano.
FIGURE 8 in Aerofilum fasciculatum gen. nov., sp. nov. (Oculatellaceae) and Euryhalinema pallustris sp. nov. (Prochlorotrichaceae) isolated from an Indian mangrove forest
FIGURE 8. Comparative analysis of V2 and V3 helix of 16S-23S ITS region of test strain AP3b (Aerofilum fasciculatum) with the genera of Oculatellaceae family. a-g. V2 helix. h-n. V3 helix.
FIGURE 4 in Aerofilum fasciculatum gen. nov., sp. nov. (Oculatellaceae) and Euryhalinema pallustris sp. nov. (Prochlorotrichaceae) isolated from an Indian mangrove forest
FIGURE 4. Transmission electron microscopy of strain AP3 and AP3b. a and b. Cross-section of a part of filament of strain AP3 showing thylakoidal arrangement and granulations. c and d. Cross-sectional view of cell of strain AP3b showing aerotopes distributed throughout the cell. th = thylakoids; pg = polyphosphate granules; cb = carboxysomes; cw = cell wall; ms = mucilaginous sheath; gv = gas vesicles.
FIGURE 1 in Aerofilum fasciculatum gen. nov., sp. nov. (Oculatellaceae) and Euryhalinema pallustris sp. nov. (Prochlorotrichaceae) isolated from an Indian mangrove forest
FIGURE 1. Map showing the location of sample collection sites of the Sundarbans forest located in the state of West Bengal, India. Samples were collected from the Sagar and the Lothian island of Indian Sundarbans. Blue pin = Sagar island; Red pin = Lothian island
FIGURE 2 in Aerofilum fasciculatum gen. nov., sp. nov. (Oculatellaceae) and Euryhalinema pallustris sp. nov. (Prochlorotrichaceae) isolated from an Indian mangrove forest
FIGURE 2. Light microscopy of strain AP3 and AP3b (non-axenic cultures). a and b. Microphotographs showing the filaments of strain AP3. c and d. Microphotographs showing the filaments of strain AP3b. Filaments observed in a & c were from exponential phase and in b & d were from stationary phase of the growth period for the respective strains. Scale = 10 µm
FIGURE 6 in Aerofilum fasciculatum gen. nov., sp. nov. (Oculatellaceae) and Euryhalinema pallustris sp. nov. (Prochlorotrichaceae) isolated from an Indian mangrove forest
FIGURE 6. Comparative analysis of D1-D1' helix, Box-B and V2 helix of 16S-23S ITS region of test strain AP3 (Euryhalinema pallustris) and reference strain Euryhalinema mangrovii. a-b. D1-D1' helix. c-d. Box-B helix. e-f. V2 helix
FIGURE 3 in Aerofilum fasciculatum gen. nov., sp. nov. (Oculatellaceae) and Euryhalinema pallustris sp. nov. (Prochlorotrichaceae) isolated from an Indian mangrove forest
FIGURE 3. Scanning electron microscopy of strains AP3 and AP3b. a, c and d. Filaments of strain AP3. b. Filaments of strain AP3b (nonaxenic) showing a hormogonium and a necridic cell. e and f. Filaments of strain AP3b showing presence of a facultative mucilaginous sheath. hg = hormogonium; nc = necridic cell; ms = mucilaginous sheath
FIGURE 5 in Aerofilum fasciculatum gen. nov., sp. nov. (Oculatellaceae) and Euryhalinema pallustris sp. nov. (Prochlorotrichaceae) isolated from an Indian mangrove forest
FIGURE 5. Phylogenetic tree based on 16S rRNA gene sequences of total 115 OTUs belonging to 3 families of Synechococcalean order and Gloeobacter violaceus as outgroup. Bootstrapping with 1000 resamplings was performed. Support values are ML bootstrap/ BI posterior probability. Scores denoted by '-' for any node showed no support in that analysis. The investigated strains with clones (AP3 and AP3b) are shown in bold. Taxon name in quotation mark, e.g. "Calothrix" in our opinion represents an incorrectly submitted sequence and requires revision. Collapsed clades can be viewed expanded in Fig. S1. Designation of families according to Mai et al. (2018).
Figure 7 in Sarcosaprophagous flesh flies (Diptera: Sarcophagidae) are less diverse in Amazon Forest than mangroves in Northeast Brazil: preliminary insights about environmental heterogeneity
Figure 7. Jaccard and Bray-Curtis dissimilarity values calculated from (A) occurrence data and (B) abundance data of Sarcophagidae, by areas and environments in Maranhão, Northeast Brazil. Taxonomic and species diversity was partitioned into the representative components of richness difference ('βrich', black boxes) and species replacement ('βrepl', grey boxes) between areas.
Figure 5 in Sarcosaprophagous flesh flies (Diptera: Sarcophagidae) are less diverse in Amazon Forest than mangroves in Northeast Brazil: preliminary insights about environmental heterogeneity
Figure 5. Mean and standard error of tree cover (%), number of species and abundance in each locality. M: mangrove; AF: Amazon Forest; 1: Maracanã, 2: Sítio Aguahy; 3: Anajatiua; %: relative abundance.
Figure 6 in Sarcosaprophagous flesh flies (Diptera: Sarcophagidae) are less diverse in Amazon Forest than mangroves in Northeast Brazil: preliminary insights about environmental heterogeneity
Figure 6. Diversity profiles by the ordering of Rényi series for each environment and each study area in Maranhão state, Northeast Brazil.
Figure 3 in Sarcosaprophagous flesh flies (Diptera: Sarcophagidae) are less diverse in Amazon Forest than mangroves in Northeast Brazil: preliminary insights about environmental heterogeneity
Figure 3. Observed cumulative curves (solid line) and extrapolation to double the number of samples (dashed line) of Sarcophagidae species by study area in Maranhão state, Northeast Brazil. 1: Anajatiua; 2: Maracanã; 3: Sítio Aguahy; F: forest; M: mangrove.
Figure 4 in Sarcosaprophagous flesh flies (Diptera: Sarcophagidae) are less diverse in Amazon Forest than mangroves in Northeast Brazil: preliminary insights about environmental heterogeneity
Figure 4. Association of tree cover (%) with (a) number of species and (b) abundance of sarcophagids in each sampling point of mangrove and forest.
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