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Dataset results

295 results for “midbrain”

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geo24/100

Synaptic decline precedes dopaminergic neuronal loss in human midbrain organoids harboring a triplication of the SNCA gene

GEO Series GSE278265. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2024View details →
geo24/100

Single cell analysis of iPSC-derived midbrain organoids (GBA1 mutant and controls)

GEO Series GSE198033. Homo sapiens. 11 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2023View details →
geo24/100

total RNA-seq from midbrain (ENCSR792RJV)

GEO Series GSE78456. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2016View details →
geo24/100

ChIP-seq from midbrain (ENCSR857GQI)

GEO Series GSE82979. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenJun 2016View details →
geo24/100

WGBS from midbrain (ENCSR803ICQ)

GEO Series GSE101302. Mus musculus. 4 samples. Type: Methylation profiling by high throughput sequencing.

openGEO-OpenJul 2017View details →
geo24/100

Transcriptomic atlas of midbrain dopamine neurons uncovers differential vulnerability in a Parkinsonism lesion model

GEO Series GSE233866. Mus musculus. 18 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2023View details →
geo24/100

ChIP-seq from midbrain (ENCSR067FKP)

GEO Series GSE82397. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenJun 2016View details →
geo24/100

ChIP-seq from midbrain (ENCSR205XBQ)

GEO Series GSE82501. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenJun 2016View details →
geo24/100

ChIP-seq from midbrain (ENCSR065LAB)

GEO Series GSE82391. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenJun 2016View details →
geo24/100

ChIP-seq from midbrain (ENCSR272GNQ)

GEO Series GSE86694. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenOct 2016View details →
geo24/100

total RNA-seq from midbrain (ENCSR307BCA)

GEO Series GSE78364. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2016View details →
geo24/100

Rational derivation of midbrain dopamine neuron progenitors from hPSCs using a selective FZD5 antibody agonist [RNA-Seq]

GEO Series GSE241041. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2024View details →
geo24/100

ChIP-seq from midbrain (ENCSR951UWY)

GEO Series GSE83042. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenJun 2016View details →
geo24/100

ChIP-seq from midbrain (ENCSR929GXP)

GEO Series GSE83025. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenJun 2016View details →
geo24/100

ChIP-seq from midbrain (ENCSR391WSS)

GEO Series GSE82656. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenJun 2016View details →
geo24/100

ChIP-seq from midbrain (ENCSR486MHP)

GEO Series GSE82732. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenJun 2016View details →
geo24/100

ChIP-seq from midbrain (ENCSR765UOU)

GEO Series GSE82933. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenJun 2016View details →
geo24/100

DNase-seq from midbrain (ENCSR292QBA)

GEO Series GSE83170. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenJun 2016View details →
geo24/100

total RNA-seq from midbrain (ENCSR255SDF)

GEO Series GSE78638. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2016View details →
geo24/100

Identification of Dysregulated Long Noncoding RNAs in the Midbrain of Human Cocaine Abusers

GEO Series GSE67281. Homo sapiens. 88 samples. Type: Non-coding RNA profiling by array.

openGEO-OpenJul 2015View details →

ScienceDex guides

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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record