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73
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ShareScore release 0.9.0
Dataset results
73 results for “pacbio”
PacBio long-read RNA-sequencing to identify differentially expressed genes and repetitive elements between Wild Type RBM4 KO HAP1 cell line samples
GEO Series GSE147896. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Werner Helicase Prevents Cell Death in Cancers with Microsatellite Instability [PacBio]
GEO Series GSE154124. Homo sapiens. 4 samples. Type: Other.
Illumina short-read and PacBio long-reads of rRNA-depleted RNA from WT S. mediterranea across multiple regeneration time points
GEO Series GSE294569. Schmidtea mediterranea. 4 samples. Type: Expression profiling by high throughput sequencing.
HSV1 transcriptosome analysis by PAcBio long read sequencing
GEO Series GSE97785. Human alphaherpesvirus 1. 6 samples. Type: Expression profiling by high throughput sequencing.
aCGH Detects Copy Number Variation with Similar Resolution to PacBio Sequencing Approaches
GEO Series GSE141976. Haplochromis burtoni; Neolamprologus brichardi; Pundamilia nyererei; Oreochromis niloticus; Maylandia zebra. 4 samples. Type: Genome variation profiling by genome tiling array.
Aegilops Tauschii Accession TA1695 Pacbio HiFi genome and Annotation
<p>The wild wheat <em>Aegilops tauschii</em> accession TA1695 (Wheat Genetics Resource Center, Kansas State University) genome and annotation information: The assembly was performed using HiFiAsm with PacBio HiFi sequencing (~15x coverage) by KSTATE, and the annotation was completed by the Plant Genome and Systems Biology group of Helmohotz Center in Munich, Germany using custom pipelines.</p> <p> </p> <p> </p>
Reference Long-Read Transcriptomes of Human Peripheral Blood Lymphocytes (PacBio Iso-Seq, Matched to Illumina RNA-Seq Data)
GEO Series GSE202327. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
PacBio SMRT-seq of wild-type, ∆metJ, and ∆yhdJ Salmonella enterica serovar Typhimurium (14028s)
GEO Series GSE185501. Salmonella enterica subsp. enterica serovar Typhimurium. 4 samples. Type: Methylation profiling by high throughput sequencing.
Xiphophorus maculatus JP163 A RNA-Seq data for PacBio Genome Annotation (Nov.2017)
GEO Series GSE107449. Xiphophorus maculatus. 26 samples. Type: Other.
Pacbio long read Iso-sequencing is performed to acquire a high-precision transcription landscape after STAMBPL1 knockingdown in Huh7 cells（Long-read）
GEO Series GSE276508. Homo sapiens. 4 samples. Type: Other.
PacBio Iso-Seq transcriptome for California Valley Oak, Quercus lobata (SW786)
GEO Series GSE174827. Quercus lobata. 3 samples. Type: Expression profiling by high throughput sequencing; Other.
PacBio SMRT-seq of wild-type, ∆metJ, and ∆dam Salmonella enterica serovar Typhimurium (14028s)
GEO Series GSE185578. Salmonella enterica subsp. enterica serovar Typhimurium. 8 samples. Type: Other.
EwS-Pacbio
The EwS-Pacbio repository provides tools for analyzing long-read targeted sequencing FASTQ files to investigate microsatellites and germline variants associated with Ewing sarcoma (EwS) susceptibility. Leveraging PacBio sequencing technology, the resource enables high-resolution investigation of genetic risk factors, including variant analysis and microsatellite profiling. It includes workflows and visualizations fused in associated publications, supporting deeper insights into EwS-related genetic mechanisms.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.