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Data from: Effects of contemporary shifts of range margins on patterns of genetic structure and mating system in two coastal plant species
Species' geographical ranges are often restricted due to niche limitation resulting in geographical isolation and reduced population size at range margins. Under the 'abundant center' paradigm, static marginal populations are thus expected to show higher genetic differentiation and lower genetic diversity than core populations. Low mate availability may also drive shifts towards higher propensity for selfing in geographically marginal populations. However, these predictions remain to be validated for contemporary range shifts occurring under current environmental change. This study is devoted to bridging this gap and assesses the spatial patterns of genetic structure and mating system across the geographical range of two coastal plant species characterized by contrasting contemporary range dynamics: the receding myrmecochorous Dune pansy (Viola tricolor subsp. curtisii) and the widespread expanding hydrochorous Rock samphire (Crithmum maritimum) Both species exhibited high propensity for selfing, with indications of inbreeding depression acting at early life stages. In Dune pansy, a biogeographical break was observed between core and marginal populations, with trailing-edge populations showing higher levels of genetic differentiation, reduced genetic diversity and higher levels of selfing estimated through progeny arrays. In contrast, genetic structuring was weak in Rock samphire and no clear spatial trends were observed in genetic diversity nor in mating system, likely the result of efficient long-distance seed dispersal by sea-surface currents. Our study highlights that key species differences in life-history traits related to dispersal and/or mate limitation modify the expectations of genetic diversity loss and mating system shift in contemporary range-expanding populations, as compared to historical core populations.
Data from: Phylogeographic pattern of range expansion provides evidence for cryptic species lineages in Silene nutans in Western Europe
As a result of recent or past evolutionary processes, a single species might consist of distinct Evolutionary Significant Units (ESUs), even corresponding to cryptic species. Determining the underlying mechanisms of range shifts and the processes at work in the build-up of divergent ESUs requires elucidating the factors that contribute to population genetic divergence across a species' range. We investigated the large-scale patterns of genetic structure in the perennial herbaceous plant species Silene nutans (Caryophyllaceae) in Western Europe. We sampled and genotyped 111 populations using 13 nuclear microsatellite loci and 6 plastid single-nucleotide polymorphisms. Broad-scale spatial population genetic structure was examined using Bayesian clustering, spatial multivariate analyses and measures of hierarchical genetic differentiation. The genotypic structure of S. nutans was typical of a predominantly allogamous mating system. We also identified plastid lineages with no intra-population polymorphism, mirroring two genetically differentiated nuclear lineages. No evidence of admixture was found. Spatial trends in genetic diversity further suggested independent leading-edge expansion associated with founding events and subsequent genetic erosion. Overall, our findings suggested speciation processes in S. nutans and highlighted striking patterns of distinct stepwise recolonisation of Western Europe shaped by Quaternary climate oscillations. Two main potential ESUs can be defined in Western Europe, corresponding to Eastern and Western nuclear-plastid lineages. In situ preservation of populations and genetic rescue implying ex situ conservation techniques should take the lineage identity into account. This is particularly true in Great Britain, northern France and Belgium, where S. nutans is rare and where distinct lineages co-occur in close contact.
FIGURE 13 in The Gondwanan relict oribatid genus Crotonia (Acari: Oribatida: Crotoniidae) from rainforests in Queensland and Northern New South Wales: new species show a mixed pattern of short-range and long-range endemism
FIGURE 13. Crotonia queenslandiae sp. nov. holotype female a) dorsal; b) ventral; c) lateral; d) detail of seta 4a.
FIGURE 5. Crotonia capistrata Luxton, 1987 holotype female a in The Gondwanan relict oribatid genus Crotonia (Acari: Oribatida: Crotoniidae) from rainforests in Queensland and Northern New South Wales: new species show a mixed pattern of short-range and long-range endemism
FIGURE 5. Crotonia capistrata Luxton, 1987 holotype female a) dorsal; b) ventral; c) posteriolateral.
FIGURE 1 in The Gondwanan relict oribatid genus Crotonia (Acari: Oribatida: Crotoniidae) from rainforests in Queensland and Northern New South Wales: new species show a mixed pattern of short-range and long-range endemism
FIGURE 1. Crotonia sterigma sp. nov. holotype female a) dorsal; b) ventral; lcs = lateroventral circumgastric scissure; pcs = perianal circumgastric scissure; c) posteriolateral.
FIGURE 15 in The Gondwanan relict oribatid genus Crotonia (Acari: Oribatida: Crotoniidae) from rainforests in Queensland and Northern New South Wales: new species show a mixed pattern of short-range and long-range endemism
FIGURE 15. Crotonia raveni sp. nov. dorsal a) holotype female; b) paratype male; c) holotype female lateral.
FIGURE 20 in The Gondwanan relict oribatid genus Crotonia (Acari: Oribatida: Crotoniidae) from rainforests in Queensland and Northern New South Wales: new species show a mixed pattern of short-range and long-range endemism
FIGURE 20. Mineral soil and organic debris coating the cerotegument of Crotonia spp. a) Crotonia daviesae sp. nov., four individuals (top and bottom: adults; left and right: nymphs) with debris layer consisting mainly of mineral soil particles; b) adult female of Crotonia daviesae sp. nov. showing debris layer covering on prodorsal and caudal regions but with uncovered notogastral shield; c) tritonymph of Crotonia raveni sp. nov. with complete, dense covering of dorsal surface; d) adult female of Crotonia raveni sp. nov. with debris layer removed showing size range of constituent particles. Scale bars: a), d) = 1 mm; b), c) = 500 μm.
FIGURE 19 in The Gondwanan relict oribatid genus Crotonia (Acari: Oribatida: Crotoniidae) from rainforests in Queensland and Northern New South Wales: new species show a mixed pattern of short-range and long-range endemism
FIGURE 19. Weights of females and tritonymphs of Crotonia raveni sp. nov. with the detrital layer covering the cerotegument intact and the same specimens with the detrital layer removed.
FIGURE 18 in The Gondwanan relict oribatid genus Crotonia (Acari: Oribatida: Crotoniidae) from rainforests in Queensland and Northern New South Wales: new species show a mixed pattern of short-range and long-range endemism
FIGURE 18. Details of bothridia of a) Crotonia sterigma sp. nov.; b) Crotonia borbora Luxton, 1987; c) Crotonia brisbanensis sp. nov.; d) Crotonia maculata sp. nov.; e) Crotonia capistrata Luxton, 1987; f) Crotonia ardala Luxton, 1987; g) Crotonia monteithi sp. nov.; h) Crotonia daviesae sp. nov.; i) Crotonia weiri sp. nov.; j) Crotonia yeatesi sp. nov.; k) Crotonia cameroni sp. nov.; l) Crotonia eungella sp. nov. m) Crotonia queenslandiae sp. nov.; n) Crotonia seemani sp. nov.; o) Crotonia raveni sp. nov.
FIGURE 21 in The Gondwanan relict oribatid genus Crotonia (Acari: Oribatida: Crotoniidae) from rainforests in Queensland and Northern New South Wales: new species show a mixed pattern of short-range and long-range endemism
FIGURE 21. Distribution of Crotonia spp. in Queensland and northern New South Wales. SF = State Forest. Shaded areas = rainforest (from Major Vegetation Groups in Australia. Australian Government Department of Environment and Heritage, 2006, www.environment.gov.au/erin/nvis/publications/major-veg-map.html)
Distribution. NW coastal Madagascar, restricted to the Sahamalaza Peninsula and the adjacent mainland; the biogeography of this area and the distribution pattern of the sympatric Blue-eyed Black Lemur (Eulemurflavifrons) make it likely that the boundaries of the range of the Sahamalaza Sportive Lemur are the Andranomalaza River in the N and the Maevarano Riverin the S. Field studies to determine the full extent of the distribution and that of neighboring Mittermeier's Sportive Lemur (L. mittermeiert) are underway. in Lepilemuridae
Distribution. NW coastal Madagascar, restricted to the Sahamalaza Peninsula and the adjacent mainland; the biogeography of this area and the distribution pattern of the sympatric Blue-eyed Black Lemur (Eulemurflavifrons) make it likely that the boundaries of the range of the Sahamalaza Sportive Lemur are the Andranomalaza River in the N and the Maevarano Riverin the S. Field studies to determine the full extent of the distribution and that of neighboring Mittermeier's Sportive Lemur (L. mittermeiert) are underway.
Nesokia is sister to Bandicota and are nested in Rattus phylogenetically, making Rat- tus paraphyletic. Tarsomys, Limnomys, and Diplothrix are also phylogenetically in Rat- tus, and the clade is in need of focused re- vision at the generic level. Nesokia bunnui was originally described as a separate ge-nus, Erythronesokia, because it is morphologically very distinctive from N. indica. Type specimen was destroyed during the Iraq War, and a neotype was recently designated to replace it. Monotypic. Distribution. Tigris and Euphrates river valleys, SE Iraq. Descriptive notes. Head—body 230-260 mm, tail 205-270 mm, ear 18-21 mm, hindfoot 49-58 mm; weight 519 g. The Long-tailed Bandicoot Rat is larger than the Short-tailed Bandicoot Rat (N. indica). Pelage is soft and woolly, interspersed with harsher coarse hair and long black hairs near mid-back. Dorsum is fawn to ocherous red, washed with purple or chestnuton darker individuals. Hairs are basally slate-gray and distally rufous, occasionally with whitish or black tips. Muzzle is drab. Sides arefawn, with gray edge toward venter. Venteris whitish, extending onto cheeks where the same pattern from gray to fawn to dorsal pelage occurs. Feet are large and robust, being light brown and well-furred dorsally. Claws are amber on forefeet and dull brown on hindfeet; pollux is extremely small. Ears are moderately long and brownish, with no hair internally. Tail is ¢.82-104% of head-body length and deep brownish drab, interspersed with visible white hair. Skull is large and robust, similarly to the Short-tailed Bandicoot Rat. Habitat. Marsh and swamp land. Food and Feeding. No information. Breeding. No information. Activity patterns. The Long-tailed Bandicoot Rat is terrestrial, although it isfound in swampy and marshy areas and is probably amphibious. Movements, Home range and Social organization. No information. Status and Conservation. Classified as Endangered on The IUCN Red List. The Longtailed Bandicoot Rat is apparently rare and is known from very few specimens. Marsh and swamp habitats in which it is found were completely destroyed during the Iraq War by draining, war damage, and agricultural expansion. In recent years, flooding from Tigris and Euphrates rivers and high snow fall and melt haveresulted in partial restoration ofits native habitat, although restoration is not a complete. Populations are now probably highly fragmented. Bibliography. Al-Ansari et al. (2012), Al-Robaae & Felten (1990), Khajuria (1981), Krystufek et al. (2017), Musser & Carleton (2005), Richardson & Hussain (2006), Stuart (2008). in Muridae
Nesokia is sister to Bandicota and are nested in Rattus phylogenetically, making Rat- tus paraphyletic. Tarsomys, Limnomys, and Diplothrix are also phylogenetically in Rat- tus, and the clade is in need of focused re- vision at the generic level. Nesokia bunnui was originally described as a separate ge-nus, Erythronesokia, because it is morphologically very distinctive from N. indica. Type specimen was destroyed during the Iraq War, and a neotype was recently designated to replace it. Monotypic. Distribution. Tigris and Euphrates river valleys, SE Iraq. Descriptive notes. Head—body 230-260 mm, tail 205-270 mm, ear 18-21 mm, hindfoot 49-58 mm; weight 519 g. The Long-tailed Bandicoot Rat is larger than the Short-tailed Bandicoot Rat (N. indica). Pelage is soft and woolly, interspersed with harsher coarse hair and long black hairs near mid-back. Dorsum is fawn to ocherous red, washed with purple or chestnuton darker individuals. Hairs are basally slate-gray and distally rufous, occasionally with whitish or black tips. Muzzle is drab. Sides arefawn, with gray edge toward venter. Venteris whitish, extending onto cheeks where the same pattern from gray to fawn to dorsal pelage occurs. Feet are large and robust, being light brown and well-furred dorsally. Claws are amber on forefeet and dull brown on hindfeet; pollux is extremely small. Ears are moderately long and brownish, with no hair internally. Tail is ¢.82-104% of head-body length and deep brownish drab, interspersed with visible white hair. Skull is large and robust, similarly to the Short-tailed Bandicoot Rat. Habitat. Marsh and swamp land. Food and Feeding. No information. Breeding. No information. Activity patterns. The Long-tailed Bandicoot Rat is terrestrial, although it isfound in swampy and marshy areas and is probably amphibious. Movements, Home range and Social organization. No information. Status and Conservation. Classified as Endangered on The IUCN Red List. The Longtailed Bandicoot Rat is apparently rare and is known from very few specimens. Marsh and swamp habitats in which it is found were completely destroyed during the Iraq War by draining, war damage, and agricultural expansion. In recent years, flooding from Tigris and Euphrates rivers and high snow fall and melt haveresulted in partial restoration ofits native habitat, although restoration is not a complete. Populations are now probably highly fragmented. Bibliography. Al-Ansari et al. (2012), Al-Robaae & Felten (1990), Khajuria (1981), Krystufek et al. (2017), Musser & Carleton (2005), Richardson & Hussain (2006), Stuart (2008).
Distribution. Mt Cameroon, W Cameroon, and Bioko I, Equatorial Guinea. Descriptive notes. Head-body 100- 130 mm, tail 110-147 mm, ear 16-20 mm, hindfoot 21-25 mm; weight 27-62 g. Fur of the Cameroon Soft-furred Mouse is dark rufous-brown to blackish brown above and pale to dark gray below. Tail is very long (c.112% of head-body length) and dark. Hindfeet and forefeet are dark brown. Females have three pairs of nipples. Habitat. Montane forest and alpine grassland at elevations above 1000 m. Food and Feeding. No information. Breeding. Gestation lasts 26-30 days. Litters have 2-6 young. Activity patterns. The Cameroon Soft-furred Mouse is nocturnal and terrestrial. Movements, Home range and Social organization. No information. Status and Conservation. Classified as Endangered on The IUCN Red List. The Cameroon Soft-furred Mouse occurs in two disjunct areas occupying only ¢.2900 km? and the extent and quality of its forest habitat continue to decline. Bibliography. Eisentraut (1970, 1973), Happold (2013a), Missoup et al. (2012), Monadjem etal. (2015). in Muridae
Distribution. Mt Cameroon, W Cameroon, and Bioko I, Equatorial Guinea. Descriptive notes. Head-body 100- 130 mm, tail 110-147 mm, ear 16-20 mm, hindfoot 21-25 mm; weight 27-62 g. Fur of the Cameroon Soft-furred Mouse is dark rufous-brown to blackish brown above and pale to dark gray below. Tail is very long (c.112% of head-body length) and dark. Hindfeet and forefeet are dark brown. Females have three pairs of nipples. Habitat. Montane forest and alpine grassland at elevations above 1000 m. Food and Feeding. No information. Breeding. Gestation lasts 26-30 days. Litters have 2-6 young. Activity patterns. The Cameroon Soft-furred Mouse is nocturnal and terrestrial. Movements, Home range and Social organization. No information. Status and Conservation. Classified as Endangered on The IUCN Red List. The Cameroon Soft-furred Mouse occurs in two disjunct areas occupying only ¢.2900 km? and the extent and quality of its forest habitat continue to decline. Bibliography. Eisentraut (1970, 1973), Happold (2013a), Missoup et al. (2012), Monadjem etal. (2015).
Deccan region, Madras, India. Genus Vandeleuria is masculine, so widely used specific name oleracea has been changed for gender agreement. Vandeleuria oleraceusis possibly a composite of species. Polytypic, but subspecific taxonomy requires reassessment. Distribution. Widespread in S Asia (India, Nepal, Bhutan, Bangladesh, and Sri Lan-ka), S China (W & S Yunnan), and mainland SE Asia N of the Isthmus of Kra. Descriptive notes. Head-body 68 mm, tail 105 mm, ear 13 mm, hindfoot 17 mm; weight 10 g. The Indomalayan Long-tailed Climbing Mouse is small, with flat nail on outer finger and outertoe; tail is slender, brown, twice as long as head-body length, and lacks distal tuft. Dorsal pelageis silky and salmon in color; venter is white, with fulvous hues. Habitat. Tall cane and tangled vines in primary and secondary forest such as bamboo forest, moist deciduous forest, temperate forests, montane wet zone, and disturbed secondary forests, and perhaps agricultural areas at elevations of 150-1500 m. Food and Feeding. Indomalayan [Long-tailed Climbing Mice eat fruits, buds, and flowers. Breeding. Litters of the Indomalayan Long-tailed Climbing Mouse have 3-6 young. Activity patterns. Indomalayan Long-tailed Climbing Mice are arboreal and nocturnal, although one individual was caught duringthe day. Movements, Home range and Social organization. Indomalayan Long-tailed Climbing Mice build nests in tall bushes or cane to rear their young. Status and Conservation. Classified as Least Concern on The IUCN Red Last (as V. olacea). The Indomalayan Long-tailed Climbing Mouse occurs in several habitats and a wide distribution that includes national parks. Further taxonomical studies are required to assess conservation status ofthis potentially diverse species complex. Bibliography. Corbet & Hill (1992), Dang Huy Huynh et al. (1994), Ellerman (1941), Marshall (1977b), Musser & Carleton (2005), Osgood (1932), Phillips (1980), Wang Yingxiang (2003). in Muridae
Deccan region, Madras, India. Genus Vandeleuria is masculine, so widely used specific name oleracea has been changed for gender agreement. Vandeleuria oleraceusis possibly a composite of species. Polytypic, but subspecific taxonomy requires reassessment. Distribution. Widespread in S Asia (India, Nepal, Bhutan, Bangladesh, and Sri Lan-ka), S China (W & S Yunnan), and mainland SE Asia N of the Isthmus of Kra. Descriptive notes. Head-body 68 mm, tail 105 mm, ear 13 mm, hindfoot 17 mm; weight 10 g. The Indomalayan Long-tailed Climbing Mouse is small, with flat nail on outer finger and outertoe; tail is slender, brown, twice as long as head-body length, and lacks distal tuft. Dorsal pelageis silky and salmon in color; venter is white, with fulvous hues. Habitat. Tall cane and tangled vines in primary and secondary forest such as bamboo forest, moist deciduous forest, temperate forests, montane wet zone, and disturbed secondary forests, and perhaps agricultural areas at elevations of 150-1500 m. Food and Feeding. Indomalayan [Long-tailed Climbing Mice eat fruits, buds, and flowers. Breeding. Litters of the Indomalayan Long-tailed Climbing Mouse have 3-6 young. Activity patterns. Indomalayan Long-tailed Climbing Mice are arboreal and nocturnal, although one individual was caught duringthe day. Movements, Home range and Social organization. Indomalayan Long-tailed Climbing Mice build nests in tall bushes or cane to rear their young. Status and Conservation. Classified as Least Concern on The IUCN Red Last (as V. olacea). The Indomalayan Long-tailed Climbing Mouse occurs in several habitats and a wide distribution that includes national parks. Further taxonomical studies are required to assess conservation status ofthis potentially diverse species complex. Bibliography. Corbet & Hill (1992), Dang Huy Huynh et al. (1994), Ellerman (1941), Marshall (1977b), Musser & Carleton (2005), Osgood (1932), Phillips (1980), Wang Yingxiang (2003).
Distribution. Now restricted to the Channel Country of SW Queensland and the Lake Eyre Basin in NE South Australia. Descriptive notes. Head-body 95-120 mm, tail 105-160 mm, ear 23-29 mm, hindfoot 32-37 mm; weight 30-50 g. The Fawn Hopping Mouse has body form typical of hopping mice, with very long hindfeet, long tail with distal brush of longer hairs, very long ears, and large protruberant eyes. Dorsal fur is of variable color, from pale pinkish fawn to gray; ventral fur white. Unlike most other hopping mice, it has no throat pouch, but males have a glandular area of naked skin on the chest. Habitat. Occurs in low shrublands and tussock grasslands on stony ("gibber") plains and claypans. Shows marked habitat segregation from the Dusky Hopping Mouse (N. fuscus), which is closely associated with sandy substrates. Food and Feeding. The Fawn Hopping Mouse is mostly granivorous, but also eats other plant material (stems, leaves) and occasionally invertebrates. It uses succulent, salt-adapted plants around edges of claypans as a source of water. Breeding. Reproduction is probably largely opportunistic and aseasonal, with high reproductive output from near-continuous breeding after periods of high rainfall; reported littersize is 1-5, most commonly three; gestation period 38-43 days for nonlactating females. Females may mature later than other hopping mice, with reproductive maturity reached at about six months. Activity patterns. Terrestrial and nocturnal. Fawn Hopping Mice shelter during day in burrow systems that are typically simpler and shallower than those of other hopping mice. Movements, Home range and Social organization. Fawn Hopping Mice generally live singly or in small groups; typically uncommon within range, but population density may increase by an order of magnitude following periods of high rainfall. Status and Conservation. Classified as Near Threatened on The IUCN Red List. The Fawn Hopping Mouse has shown marked decline in range (estimated at greater than 50%), and presumably population size, since European settlement of Australia. This is mostlikely due to predation by the introduced house cat and Red Fox (Vulpes vulpes), and to habitat degradation associated with pastoralism. Bibliography. Brazenor (1934), Burbidge et al. (2008), Finlayson (1939), Gould (1853), Jackson & Groves (2015), Murray et al. (1999), Ogilby (1892), Thomas (1921h), Van Dyck & Strahan (2008), Waite (1898), Watts & Aslin (1981), Woinarski et al. (2014), Wood Jones (1925). in Muridae
Distribution. Now restricted to the Channel Country of SW Queensland and the Lake Eyre Basin in NE South Australia. Descriptive notes. Head-body 95-120 mm, tail 105-160 mm, ear 23-29 mm, hindfoot 32-37 mm; weight 30-50 g. The Fawn Hopping Mouse has body form typical of hopping mice, with very long hindfeet, long tail with distal brush of longer hairs, very long ears, and large protruberant eyes. Dorsal fur is of variable color, from pale pinkish fawn to gray; ventral fur white. Unlike most other hopping mice, it has no throat pouch, but males have a glandular area of naked skin on the chest. Habitat. Occurs in low shrublands and tussock grasslands on stony ("gibber") plains and claypans. Shows marked habitat segregation from the Dusky Hopping Mouse (N. fuscus), which is closely associated with sandy substrates. Food and Feeding. The Fawn Hopping Mouse is mostly granivorous, but also eats other plant material (stems, leaves) and occasionally invertebrates. It uses succulent, salt-adapted plants around edges of claypans as a source of water. Breeding. Reproduction is probably largely opportunistic and aseasonal, with high reproductive output from near-continuous breeding after periods of high rainfall; reported littersize is 1-5, most commonly three; gestation period 38-43 days for nonlactating females. Females may mature later than other hopping mice, with reproductive maturity reached at about six months. Activity patterns. Terrestrial and nocturnal. Fawn Hopping Mice shelter during day in burrow systems that are typically simpler and shallower than those of other hopping mice. Movements, Home range and Social organization. Fawn Hopping Mice generally live singly or in small groups; typically uncommon within range, but population density may increase by an order of magnitude following periods of high rainfall. Status and Conservation. Classified as Near Threatened on The IUCN Red List. The Fawn Hopping Mouse has shown marked decline in range (estimated at greater than 50%), and presumably population size, since European settlement of Australia. This is mostlikely due to predation by the introduced house cat and Red Fox (Vulpes vulpes), and to habitat degradation associated with pastoralism. Bibliography. Brazenor (1934), Burbidge et al. (2008), Finlayson (1939), Gould (1853), Jackson & Groves (2015), Murray et al. (1999), Ogilby (1892), Thomas (1921h), Van Dyck & Strahan (2008), Waite (1898), Watts & Aslin (1981), Woinarski et al. (2014), Wood Jones (1925).
The first comprehensive revision of all the species attributed to Melomys led J. I. Menzies in 1996 to resurrect the genus Paramelomys and to redefine its morphologicallimits and species content. Menzies created P. gressitti as a new species belonging to a group displaying morphological similarities and including also P. lorentzii and P. moncktoni. Monotypic Distribution. E New Guinea. Descriptive notes. Head-body 135-162 mm, hindfoot 30-34 mm; no specific data are available for body weight. Gressitt's Mosaic-tailed Rat is a medium-sized Paramelomys with a soft, thick and woolly pelage, a long narrow foot, and a tail with three hairs per scale. It exhibits a medium-sepia dorsal pelage and a gray-buff ventral one. Tail is slightly shorter (99%) than head-body length. The skull has a narrow zygomatic plate. Habitat. Moist tropical mountain forest between 2300 m and 2400 m. Food and Feeding. No information. Breeding. No information. Activity patterns. Gressitt's Mosaic-tailed Rat is terrestrial. Movements, Home range and Social organization. No information. Status and Conservation. Classified as Endangered on The IUCN Red List owing to its small geographic range (less than 3500 km?*) and the destruction ofits habitat by mining and logging activities. The major threat to Gressitt's Mosaic-tailed Rat is ongoing habitat degradation caused by nearby human populations; habitat on Mount Kandy has been destroyed by gold-miners and wood-cutters. Bibliography. Menzies (1996). in Muridae
The first comprehensive revision of all the species attributed to Melomys led J. I. Menzies in 1996 to resurrect the genus Paramelomys and to redefine its morphologicallimits and species content. Menzies created P. gressitti as a new species belonging to a group displaying morphological similarities and including also P. lorentzii and P. moncktoni. Monotypic Distribution. E New Guinea. Descriptive notes. Head-body 135-162 mm, hindfoot 30-34 mm; no specific data are available for body weight. Gressitt's Mosaic-tailed Rat is a medium-sized Paramelomys with a soft, thick and woolly pelage, a long narrow foot, and a tail with three hairs per scale. It exhibits a medium-sepia dorsal pelage and a gray-buff ventral one. Tail is slightly shorter (99%) than head-body length. The skull has a narrow zygomatic plate. Habitat. Moist tropical mountain forest between 2300 m and 2400 m. Food and Feeding. No information. Breeding. No information. Activity patterns. Gressitt's Mosaic-tailed Rat is terrestrial. Movements, Home range and Social organization. No information. Status and Conservation. Classified as Endangered on The IUCN Red List owing to its small geographic range (less than 3500 km?*) and the destruction ofits habitat by mining and logging activities. The major threat to Gressitt's Mosaic-tailed Rat is ongoing habitat degradation caused by nearby human populations; habitat on Mount Kandy has been destroyed by gold-miners and wood-cutters. Bibliography. Menzies (1996).
Lophuromys medicaudatus, L. woosnami, and L. luteogaster are in subgenus Kivumys and woosnami species group. Monotypic. Distribution. Endemic to the Albertine Rift, occurring around Lake Kivu in E DR Congo and Rwanda and SW Uganda (Bwindi). Descriptive notes. Head—body 92-112 mm, tail 73-95 mm, ear 15-19 mm, hindfoot 18-23 mm; weight 29-43 g. Similar to other species in subgenus Kivumys, the Western Rift Brush-furred Rat has unspeckled pelage, and tail ¢.85% of head-body length. Dorsum is uniform dark brown-olive, and venter is orange. Females have three pairs of mammae. Habitat. Mountain swamps and mountain forests at elevations of 1850-2500 m. Food and Feeding. The Western Rift Brush-furred Rat is omnivorous; diets contain 30-100% arthropods, mollusks, seeds, and fruits. Breeding. Female Western Rift Brush-furred Rats can have 1-2 embryos. Pregnant females were observed in February, April, and July. Activity patterns. The Western Rift Brush-furred Rat is terrestrial. Movements, Home range and Social organization. No information. Status and Conservation. Classified as Vulnerable on The IUCN Red List. The Western Rift Brush-furred Rat has never been found in modified secondary environment and is quite rare. Bibliography. Dieterlen (1976b, 1987 2013g), Kasangaki et al. (2003), Verheyen et al. (1996). in Muridae
Lophuromys medicaudatus, L. woosnami, and L. luteogaster are in subgenus Kivumys and woosnami species group. Monotypic. Distribution. Endemic to the Albertine Rift, occurring around Lake Kivu in E DR Congo and Rwanda and SW Uganda (Bwindi). Descriptive notes. Head—body 92-112 mm, tail 73-95 mm, ear 15-19 mm, hindfoot 18-23 mm; weight 29-43 g. Similar to other species in subgenus Kivumys, the Western Rift Brush-furred Rat has unspeckled pelage, and tail ¢.85% of head-body length. Dorsum is uniform dark brown-olive, and venter is orange. Females have three pairs of mammae. Habitat. Mountain swamps and mountain forests at elevations of 1850-2500 m. Food and Feeding. The Western Rift Brush-furred Rat is omnivorous; diets contain 30-100% arthropods, mollusks, seeds, and fruits. Breeding. Female Western Rift Brush-furred Rats can have 1-2 embryos. Pregnant females were observed in February, April, and July. Activity patterns. The Western Rift Brush-furred Rat is terrestrial. Movements, Home range and Social organization. No information. Status and Conservation. Classified as Vulnerable on The IUCN Red List. The Western Rift Brush-furred Rat has never been found in modified secondary environment and is quite rare. Bibliography. Dieterlen (1976b, 1987 2013g), Kasangaki et al. (2003), Verheyen et al. (1996).
Expansion of non-native plant Flaveria bidentis (L.) Kuntze driven by range of factors leading to patchy distribution patterns
<p><span>Given the growing concern over the ecological impacts of non-native species, exploring these species' expansion edge and distribution patterns and their driving factors is important for developing suitable management measures. <em>Flaveria bidentis</em> (L.) Kuntze, a non-native plant that was introduced to China in the 1990s, has spread from southern Hebei Province, where it first took root, to the surrounding regions and has become one of the most notorious invasive weeds in northern China. Based on 15 years (2006-2021) of extensive field investigations, the spatial distribution of sampling and occurrence points were mapped in the recently expanded region of <em>F. bidentis</em>' population. Then, nearest neighbor analysis used to characterize the spatial pattern differences between samplings and occurrences. An exponential decay function was used to elucidate the driving factors contributing to the presence and absence of <em>F. bidentis</em>. Our results demonstrated an effective random sampling setup, a heterogeneous spatial distribution of <em>F. bidentis</em>, and a multi-regional independent aggregation distribution pattern (<em>p</em><0.01). There were significant spatial correlations between the aggregation areas of plant occurrence points and the locations of roads and construction sand distribution centers. These findings suggest that human activities involving major roads and construction sand distribution centers were driving factors contributing to this long-distance dispersal and spatially discontinuous distribution patterns.</span><span class="MsoCommentReference"><span> </span></span><span class="MsoCommentReference"><span>The presence of these patchy distribution patterns has important implications for ongoing efforts to manage populations of non-native species.</span></span></p>
Fig. 3 a in Phylogeographic patterns of genetic diversity in the common spadefoot toad, Pelobates fuscus (Anura: Pelobatidae), reveals evolutionary history, postglacial range expansion and secondary contact
Fig. 3 a Bayesian phylogenetic analysis based on a 571-bp fragment of the mitochondrial cyt b gene. Only haplotype sequences have been used. Spea bombifrons was used as outgroup. Asterisks denote Bayesian posterior probabilities values: *95–98 %; **99–100 %. b Haplotype network reconstruction of 29 haplotypes of Pelobates fuscus fuscus (W) and of 13 haplotypes of P. f. vespertinus (E), based on the analysis of a 571-bp fragment of the mitochondrial cytochrome b gene. Size of circles is proportional to the number of individuals sharing a given haplotype. The frequency of each haplotype has been computed based on published data (Crottini et al. 2007) and on new sequences
Fig. 1 in Phylogeographic patterns of genetic diversity in the common spadefoot toad, Pelobates fuscus (Anura: Pelobatidae), reveals evolutionary history, postglacial range expansion and secondary contact
Fig. 1 Geographic locations of the 59 analyzed populations of Pelobates. The limit of the geographic distribution of Pelobates fuscus is indicated with the solid line. The dashed line indicates the presumptive position of the contact zone between P. f. fuscus
ScienceDex guides
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.