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Dataset results
3,508 results for “reprogramming”
Data from: Reprogramming the antigen specificity of B cells using genome-editing technologies
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Data from: Microglia responses to pro-inflammatory stimuli (LPS, IFNγ+TNFα) and reprogramming by resolving cytokines (IL-4, IL-10)
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['Relevance of Unfolded Protein Response to Spaceflight-Induced Transcriptional Reprogramming in Arabidopsis']
['Plants are primary producers of food and oxygen on Earth and will likewise be indispensable to the establishment of large-scale sustainable ecosystems and human survival in space. To contribute to the understanding of how plants respond to spaceflight stresses, we examined the relevance of the unfolded protein response (UPR), a conserved signaling cascade that responds to a number of unfavorable environmental stresses, in the model plant species Arabidopsis thaliana. To do so, we compared the transcriptional responses of wild type and UPR-defective seedlings to spaceflight during the SpaceX-CRS12 mission to the International Space Station. We established that orbital culture substantially altered the expression of hundreds of stress related genes compared to ground control conditions. Although many of these genes were differentially regulated in the UPR mutants in the ground control conditions compared to wild type, their expression was largely equalized in all genotypes by flight. Our results have yielded new information on how plants respond to growth in orbit and support the hypothesis that spaceflight induces the activation of signaling pathways that compensate for the loss of UPR regulators in the control of downstream transcriptional regulatory networks.']
Chemical reprogramming of melanocytes to skeletal muscle cells
GEO Series GSE213195. Mus musculus. 5 samples. Type: Expression profiling by high throughput sequencing.
Lamin A/C-regulated cysteine catabolic flux modulates stem cell fate through epigenome reprogramming [04scRNA_seq_D10]
GEO Series GSE248533. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Reprogram-Seq: A platform for single-cell combinatorial reprogramming [V]
GEO Series GSE117790. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
Transcriptional Reprogramming during Floral Fate Acquisition III
GEO Series GSE205298. Arabidopsis thaliana. 12 samples. Type: Expression profiling by high throughput sequencing.
Functional reprogramming of monocytes in acute and convalescent severe COVID-19 patients [ATAC-seq]
GEO Series GSE198255. Homo sapiens. 30 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Reprogramming-associated aberrant DNA methylation determines hematopoietic differentiation capacity of human induced pluripotent stem cells [PSCderived_HPCs_methylation]
GEO Series GSE60811. Homo sapiens. 10 samples. Type: Methylation profiling by genome tiling array.
Resetting epigenetic memory by reprogramming of histone modifications in mammals
GEO Series GSE76687. Mus musculus. 27 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
ASPSCR1-TFE3 reprograms transcription by organizing enhancers around hexameric VCP [RNA-Seq, ASPS1_KD]
GEO Series GSE162486. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Direct Reprogramming of Fibroblasts into Functional Mammary Epithelial cells by small molecules (lncRNAseq)
GEO Series GSE142547. Capra hircus. 6 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Targeted erythrophagocyte reprogramming of Kupffer cells halts cancer immunotherapy associated liver toxicity [Ter119 experiment]
GEO Series GSE202917. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Establish a rapid and efficient chemical reprogramming platform (RRBS)
GEO Series GSE188831. Mus musculus. 16 samples. Type: Methylation profiling by high throughput sequencing.
Biomodal role of H3.3 in safe-guarding and establishing cell identities during reprogramming [RNA-Seq H3.3 KD]
GEO Series GSE107050. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Transient naive reprogramming corrects hiPS cells functionally and epigenetically [WGBS 2]
GEO Series GSE160933. Homo sapiens. 21 samples. Type: Methylation profiling by high throughput sequencing.
RELB Reprograms Exhausted Tumor-Infiltrating Lymphocytes for Improved Adoptive Cell Therapy [TCR-Seq]
GEO Series GSE303438. Homo sapiens. 38 samples. Type: Other.
EHF and CDX1 co-operate to drive extensive transcriptional reprogramming and chromatin remodelling in CRC cells [RNA-seq]
GEO Series GSE202073. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Direct neuronal reprogramming of mouse astrocytes is associated with multiscale epigenome remodeling and requires Yy1
GEO Series GSE208742. Mus musculus. 64 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing; Other.
Paternally-induced transgenerational environmental reprogramming of metabolic gene expression in mammals (small RNA)
GEO Series GSE25897. Mus musculus. 8 samples. Type: Non-coding RNA profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.