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248
datasets available to search
ShareScore release 0.9.0
Dataset results
248 results for “retrotransposons”
RNAseq analysis of Hep3B cells upon overexpression of LINE1 retrotransposon encoded protein L1orf1p
GEO Series GSE194251. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Paternal MTHFR deficiency leads to reproductive decline across generations in association with hypomethylation of young retrotransposons
GEO Series GSE166586. Mus musculus. 21 samples. Type: Methylation profiling by high throughput sequencing.
B2 and ALU retrotransposons are self-cleaving RNAs whose activity is enhanced by EZH2
GEO Series GSE139931. Homo sapiens. 1 samples. Type: Non-coding RNA profiling by high throughput sequencing.
The transcription factor SRF regulates MERVL retrotransposons and gene expression during zygotic genome activation
GEO Series GSE271983. Mus musculus. 35 samples. Type: Expression profiling by high throughput sequencing.
DNA methylation-sensitive transcription factors and bivalency orchestrate transposon expression in the absence of DNA methylation [Postnatal Retrotransposon expression in spermatogenesis]
GEO Series GSE282278. Mus musculus. 14 samples. Type: Expression profiling by high throughput sequencing.
DGCR8 controls retrotransposon-derived double-stranded RNA accumulation and interferon activation
GEO Series GSE294748. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
The spatial and temporal dynamics of the nuclear RNAi-targeted retrotransposon transcripts in Caenorhabditis elegans [ncRNA-seq]
GEO Series GSE118428. Caenorhabditis elegans. 2 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Centrophilic retrotransposon integration via targeting CENH3 chromatin in Arabidopsis [ChIP-Seq]
GEO Series GSE263225. Arabidopsis thaliana. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
Transcriptional coupling of telomeric retrotransposons with the cell cycle
GEO Series GSE278499. Drosophila melanogaster. 3 samples. Type: Expression profiling by high throughput sequencing.
CENP-B cooperates with Set1 in bidirectional transcriptional silencing and genome organization of retrotransposons
GEO Series GSE39404. Schizosaccharomyces pombe. 4 samples. Type: Expression profiling by array.
Postmortem Cortex Samples Identify Distinct Molecular Subtypes of ALS: Retrotransposon Activation, Oxidative Stress, and Activated Glia [motor cortex]
GEO Series GSE122649. Homo sapiens. 38 samples. Type: Expression profiling by high throughput sequencing.
SVA retrotransposon insertion-associated deletion represents a novel mutational mechanism underlying large genomic copy number changes with non-recurrent breakpoints
GEO Series GSE57859. Homo sapiens. 12 samples. Type: Genome variation profiling by array.
TRIM28 repression of retrotransposon-based enhancers is necessary to preserve transcriptional dynamics in embryonic stem cells
GEO Series GSE41903. Mus musculus. 18 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Maternally deposited germline piRNAs silence the tirant retrotransposon in somatic cells
GEO Series GSE40592. Drosophila simulans. 4 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Asterix/Gtsf1 links tRNAs and piRNA silencing of retrotransposons
GEO Series GSE151112. Spodoptera frugiperda; Drosophila melanogaster; Mus musculus. 24 samples. Type: Other.
Analysis of plant LTR-retrotransposons at the fine-scale family level reveals individual molecular patterns
GEO Series GSE35143. Saccharum officinarum. 1 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Drosophila retrotransposon and inverted repeat-derived endogenous siRNAs are differentially processed in distinct cellular locations
GEO Series GSE82128. Drosophila melanogaster. 18 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.
Lysosomal catabolic activity governs the exit of the murine totipotent 2-cell state by silencing early-embryonic retrotransposons [CUT&Tag]
GEO Series GSE247081. Mus musculus. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
LINE-1 retrotransposons are reduced in bone of osteoporotic patients, correlate positively to BMD, and stimulate bone anabolism in transfected mesenchymal stem cells
GEO Series GSE201774. Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing.
Retrotransposons in Werner syndrome-derived macrophages trigger type I interferon-dependent inflammation in an atherosclerosis model [iPS-VEC RNA-seq]
GEO Series GSE247710. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.