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271
datasets available to search
ShareScore release 0.9.0
Dataset results
271 results for “scATAC”
Respiratory viral infections prime accelerated lung cancer growth [scATAC-Seq]
GEO Series GSE317577. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
A human mutation in STAT3 promotes type 1 diabetes through a defect in CD8+ T cell tolerance [scATAC]
GEO Series GSE173412. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
NF-kB and Circadian Enhancers Link β-cell Function with Anti-IL1B Therapy [scATAC-seq]
GEO Series GSE214675. Mus musculus; Homo sapiens. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Smarca4 inactivation promotes lineage-specific transformation and early metastatic features in the lung [scATAC-seq]
GEO Series GSE161920. Homo sapiens; Mus musculus. 19 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
BRG1/BRM inhibitor targets AML stem cells and exerts superior preclinical efficacy combined with BET or Menin inhibitor (scATAC-Seq)
GEO Series GSE252936. Homo sapiens. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Integrated single-cell chromatin and transcriptomic analyses of human scalp reveal etiological insights into genetic risk for hair and skin disease [scATAC-Seq]
GEO Series GSE212448. Homo sapiens. 13 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The transcription factor Grainyhead primes epithelial enhancers for spatiotemporal activation by displacing nucleosomes [scATAC-seq]
GEO Series GSE102544. Drosophila melanogaster. 96 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Simultaneous single-cell three-dimensional genome and gene expression profiling Uncovers Dynamic Enhancer Connectivity Underlying Olfactory Receptor Choice [scATAC-Seq, scRNA-seq]
GEO Series GSE239876. Mus musculus. 143 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-cell epigenomics and high-density genetic variation resolve the architecture of the Treg regulatory network [scATAC-seq]
GEO Series GSE216910. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Multi-omics analysis identifies progenitors of CD4-CTLs [scATAC-seq ex vivo]
GEO Series GSE288973. Homo sapiens. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Longitudinal single cell transcriptional and epigenetic mapping of effector, memory, and exhausted CD8 T cells reveals shared biological circuits across distinct cell fates [scATAC-Seq 1]
GEO Series GSE199556. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Targeting of epigenetic co-dependencies enhances anti-AML efficacy of Menin inhibitor in AML with MLL1-r or mutant NPM1. [scATAC-Seq]
GEO Series GSE228325. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Mouse models of neutropenia reveal progenitor-stage-specific defects [scATAC-Seq]
GEO Series GSE142358. Mus musculus. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Mutations from IPEX patients elicit a range of phenotypes in mice [scATAC-Seq]
GEO Series GSE237198. Mus musculus. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Cell-type and locus-specific epigenetic editing of memory expression [scATAC_data]
GEO Series GSE299741. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
CD38+ Alveolar Macrophages mediate early control of M.tuberculosis proliferation in the lung [scATAC-seq]
GEO Series GSE245836. Mus musculus. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Designing a single cell ATAC-Seq (scATAC-Seq) dataset to validate long read RNA-Seq isoforms and benchmark scATAC-Seq analysis methods
GEO Series GSE142285. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
SOCS3 deletion in effector T cells confers an anti-tumorigenic role of IL-6 to the pro-tumorigenic cytokine [scATAC-Seq]
GEO Series GSE235116. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
chromatin accessibility assay at single-cell level (scATAC-seq) of the K562 cells with CRISPR-Cas9 KO of either HUB162 or HUB161
GEO Series GSE231380. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Joint representation and visualization of derailed cell states with Decipher [scATAC-seq]
GEO Series GSE299002. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.