Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
140
datasets available to search
ShareScore release 0.7.1
Dataset results
140 results for “secondary metabolites”
Figure 2 from: Phookamsak R, Hongsanan S, Bhat DJ, Wanasinghe DN, Promputtha I, Suwannarach N, Kumla J, Xie N, Dawoud TM, Mortimer PE, Xu J, Lumyong S (2024) Exploring ascomycete diversity in Yunnan II: Introducing three novel species in the suborder Massarineae (Dothideomycetes, Pleosporales) from fern and grasses. In: Wijayawardene N, Karunarathna S, Fan X-L, Li Q-R (Eds) Taxonomy and secondary metabolites of wood-associated fungi. MycoKeys 104: 9-50. https://doi.org/10.3897/mycokeys.104.112149
Figure 2 Phylogram of the best-scoring ML consensus tree of Trichobotrys species in Dictyosporiaceae and closely-related families viz. Didymosphaeriaceae, Lentitheciaceae, Morosphaeriaceae, Sulcatisporaceae and Trematosphaeriaceae. The new isolate is indicated in blue. Isolates from type materials are in bold. The ML ultrafast bootstrap and Bayesian PP values greater than 70% and 0.95 are shown at the nodes.
Figure 3 from: Zhang Q-Y, Liu H-G, Li W-Y, Zhang X, Dai Y-C, Wu F, Bian L-S (2024) Three new species of Favolaschia (Mycenaceae, Agaricales) from South China. In: Wijayawardene N, Karunarathna S, Fan X-L, Li Q-R (Eds) Taxonomy and secondary metabolites of wood-associated fungi. MycoKeys 104: 71-89. https://doi.org/10.3897/mycokeys.104.117310
Figure 3 Dry basidiomata of Favolaschia species AFavolaschia imbricataBFavolaschia miscanthiC, DFavolaschia sinarundinariae. Scale bars: 1 mm.
Figure 2 from: Li J, Li J, Jiang N (2024) Morphology and phylogeny of Cytospora (Cytosporaceae, Diaporthales) species associated with plant cankers in Tibet, China. In: Wijayawardene N, Karunarathna S, Fan X-L, Li Q-R (Eds) Taxonomy and secondary metabolites of wood-associated fungi. MycoKeys 104: 51-70. https://doi.org/10.3897/mycokeys.104.113567
Figure 2 Cytospora myricicola (CAF800083, holotype) A, B canker disease symptom C conidioma D transverse section through a conidioma E longitudinal section through a conidioma F conidiophores and conidia G, H conidia. Scale bars: 2000 µm (B); 1000 µm (C, D); 500 µm (E); 10 µm (F–H).
Figure 6 from: Qi Z-X, Qian K-Q, Yue L, Wang L-B, Guo D-Z, Wu D-M, Gao N, Zhang B, Li Y (2024) New species, new records and common species of Pluteus sect. Celluloderma from northern China. In: Wijayawardene N, Karunarathna S, Fan X-L, Li Q-R (Eds) Taxonomy and secondary metabolites of wood-associated fungi. MycoKeys 104: 91-112. https://doi.org/10.3897/mycokeys.104.117841
Figure 6 A macroscopic characteristics of Pluteus romelliiB basidiospores C pleurocystidia D basidia E cheilocystidia F pileipellis. Scale bars: 1 cm (A); 10 µm (B–E); 20 µm (F).
Figure 1 from: Han L-S, Wijayawardene NN, Liu C, Han L-H, Promputtha I, Li Q, Elgorban AM, Al-Rejaie S, Tanaka K, Dai D-Q (2024) Paramphibambusa bambusicola gen. et. sp. nov., Arecophila xishuangbannaensis and A. zhaotongensis spp. nov. in Cainiaceae from Yunnan, China. In: Wijayawardene N, Karunarathna S, Fan X-L, Li Q-R (Eds) Taxonomy and secondary metabolites of wood-associated fungi. MycoKeys 104: 113-132. https://doi.org/10.3897/mycokeys.104.117872
Figure 1 The RAxML tree was generated based on the combined ITS, LSU, rpb2, and tub sequence data. Bootstrap support values for ML equal to or greater than 60%, and Bayesian posterior probabilities (BYPP) equal to or higher than 0.90 are indicated above the nodes as ML/PP. Type materials are indicated by superscript "T", while the newly generated sequences are shown in red.
Figure 5 from: Phookamsak R, Hongsanan S, Bhat DJ, Wanasinghe DN, Promputtha I, Suwannarach N, Kumla J, Xie N, Dawoud TM, Mortimer PE, Xu J, Lumyong S (2024) Exploring ascomycete diversity in Yunnan II: Introducing three novel species in the suborder Massarineae (Dothideomycetes, Pleosporales) from fern and grasses. In: Wijayawardene N, Karunarathna S, Fan X-L, Li Q-R (Eds) Taxonomy and secondary metabolites of wood-associated fungi. MycoKeys 104: 9-50. https://doi.org/10.3897/mycokeys.104.112149
Figure 5 Trichobotrys sinensis (KUN-HKAS 129041, holotype) A, B the appearance of colonies on the host surface C mycelium D–H conidiophores bearing conidiogenous cells and conidia I conidia in a short acropetal chain J–N conidia O culture characteristics on PDAP conidioma forming on PDA after eight weeks Q pycnidial wall R–T conidiogenous cells (note: T = stained in Congo red) U conidia. Scale bars: 100 μm (P); 50 μm (C); 10 μm (D–H, Q–U); 5 μm (J–N).
Figure 2 from: Qi Z-X, Qian K-Q, Yue L, Wang L-B, Guo D-Z, Wu D-M, Gao N, Zhang B, Li Y (2024) New species, new records and common species of Pluteus sect. Celluloderma from northern China. In: Wijayawardene N, Karunarathna S, Fan X-L, Li Q-R (Eds) Taxonomy and secondary metabolites of wood-associated fungi. MycoKeys 104: 91-112. https://doi.org/10.3897/mycokeys.104.117841
Figure 2 Basidiomata features A–BPluteus brunneodiscusC–DP. cystidiosusE–FP. chrysophlebiusG–IP. romellii. Photos by Zheng-xiang Qi (A–B, G–I). Photos by Di-zhe Guo (C–F). Scale bars: 1 cm.
Figure 4 from: Qi Z-X, Qian K-Q, Yue L, Wang L-B, Guo D-Z, Wu D-M, Gao N, Zhang B, Li Y (2024) New species, new records and common species of Pluteus sect. Celluloderma from northern China. In: Wijayawardene N, Karunarathna S, Fan X-L, Li Q-R (Eds) Taxonomy and secondary metabolites of wood-associated fungi. MycoKeys 104: 91-112. https://doi.org/10.3897/mycokeys.104.117841
Figure 4 A Macroscopic characteristics of Pluteus cystidiosusB caulocystidia C basidiospores D pleurocystidia E cheilocystidia F basidia G pileipellis. Scale bars: 1 cm (A); 10 µm (B–G).
Figure 2 from: Zhang Q-Y, Liu H-G, Li W-Y, Zhang X, Dai Y-C, Wu F, Bian L-S (2024) Three new species of Favolaschia (Mycenaceae, Agaricales) from South China. In: Wijayawardene N, Karunarathna S, Fan X-L, Li Q-R (Eds) Taxonomy and secondary metabolites of wood-associated fungi. MycoKeys 104: 71-89. https://doi.org/10.3897/mycokeys.104.117310
Figure 2 Maximum Likelihood (ML) tree illustrating the phylogeny of Favolaschia, based on a combined ITS1-5.8S-ITS2-nLSU-mtSSU-nuSSU dataset. Branches are labelled with parsimony bootstrap values (ML) higher than 50% and Bayesian Posterior Probabilities (BPPs) more than 0.90. (Group A: Favolaschia sect. Favolaschia; Group B: Favolaschia sect. Anechinus)
Figure 1 from: Zhang Q-Y, Liu H-G, Li W-Y, Zhang X, Dai Y-C, Wu F, Bian L-S (2024) Three new species of Favolaschia (Mycenaceae, Agaricales) from South China. In: Wijayawardene N, Karunarathna S, Fan X-L, Li Q-R (Eds) Taxonomy and secondary metabolites of wood-associated fungi. MycoKeys 104: 71-89. https://doi.org/10.3897/mycokeys.104.117310
Figure 1 The geographical locations of Favolaschia species distributed in China (the base map of China was obtained from the Map Technology Review Center, Department of Natural Resources, http://bzdt.ch.mnr.gov.cn/).
Figure 3 from: Han L-S, Wijayawardene NN, Liu C, Han L-H, Promputtha I, Li Q, Elgorban AM, Al-Rejaie S, Tanaka K, Dai D-Q (2024) Paramphibambusa bambusicola gen. et. sp. nov., Arecophila xishuangbannaensis and A. zhaotongensis spp. nov. in Cainiaceae from Yunnan, China. In: Wijayawardene N, Karunarathna S, Fan X-L, Li Q-R (Eds) Taxonomy and secondary metabolites of wood-associated fungi. MycoKeys 104: 113-132. https://doi.org/10.3897/mycokeys.104.117872
Figure 3 Arecophila xishuangbannaensis (GMB-W1283, holotype) a bamboo specimen b, c appearance of ostioles on host surface d–f vertical sections of ascomata g peridium h paraphyses i–m asci n asci with J+, wedge-shaped rings (Stained in Melzer's reagent) o–t ascospores (s showing ascospore with longitudinal striations t ascospore stained in Indian ink showing mucilaginous sheath). Scale bars: 300 μm (d–f); 20 μm (g); 30 μm (h); 50 μm (i–m); 15 μm (n–t).
Figure 3 from: Phookamsak R, Hongsanan S, Bhat DJ, Wanasinghe DN, Promputtha I, Suwannarach N, Kumla J, Xie N, Dawoud TM, Mortimer PE, Xu J, Lumyong S (2024) Exploring ascomycete diversity in Yunnan II: Introducing three novel species in the suborder Massarineae (Dothideomycetes, Pleosporales) from fern and grasses. In: Wijayawardene N, Karunarathna S, Fan X-L, Li Q-R (Eds) Taxonomy and secondary metabolites of wood-associated fungi. MycoKeys 104: 9-50. https://doi.org/10.3897/mycokeys.104.112149
Figure 3 Phylogram of the best-scoring ML consensus tree of taxa in Periconiaceae and the closely-related families Lentitheciaceae and Massarinaceae. The new isolate is indicated in blue. Isolates from type materials are in bold. The ML ultrafast bootstrap and Bayesian PP values greater than 50% and 0.95 are shown at the nodes.
Figure 5 from: Qi Z-X, Qian K-Q, Yue L, Wang L-B, Guo D-Z, Wu D-M, Gao N, Zhang B, Li Y (2024) New species, new records and common species of Pluteus sect. Celluloderma from northern China. In: Wijayawardene N, Karunarathna S, Fan X-L, Li Q-R (Eds) Taxonomy and secondary metabolites of wood-associated fungi. MycoKeys 104: 91-112. https://doi.org/10.3897/mycokeys.104.117841
Figure 5 A macroscopic characteristics of Pluteus chrysophlebiusB basidiospores C basidia D pleurocystidia E cheilocystidia F pileipellis. Scale bars: 1 cm (A); 10 µm (B–G).
Figure 4 from: Phookamsak R, Hongsanan S, Bhat DJ, Wanasinghe DN, Promputtha I, Suwannarach N, Kumla J, Xie N, Dawoud TM, Mortimer PE, Xu J, Lumyong S (2024) Exploring ascomycete diversity in Yunnan II: Introducing three novel species in the suborder Massarineae (Dothideomycetes, Pleosporales) from fern and grasses. In: Wijayawardene N, Karunarathna S, Fan X-L, Li Q-R (Eds) Taxonomy and secondary metabolites of wood-associated fungi. MycoKeys 104: 9-50. https://doi.org/10.3897/mycokeys.104.112149
Figure 4 Bambusicola hongheensis (KUN-HKAS 129042, holotype) A the appearance of ascomata on the host surface B vertical section of an ascoma C, D peridia E pseudoparaphyses F, G asci embedded in pseudoparaphyses H–K ascospores L, M ascospores stained in India Ink show a thin mucilaginous sheath surrounding ascospores. Scale bars: 100 μm (B); 20 μm (C–G); 10 μm (H–M).
Figure 1 from: Qi Z-X, Qian K-Q, Yue L, Wang L-B, Guo D-Z, Wu D-M, Gao N, Zhang B, Li Y (2024) New species, new records and common species of Pluteus sect. Celluloderma from northern China. In: Wijayawardene N, Karunarathna S, Fan X-L, Li Q-R (Eds) Taxonomy and secondary metabolites of wood-associated fungi. MycoKeys 104: 91-112. https://doi.org/10.3897/mycokeys.104.117841
Figure 1 Phylogenetic tree of the sect. Celluloderma of the genus Pluteus. The best tree from the ML and BI analysis of the nrITS + TEF1-α dataset. The two values of internal nodes respectively represent the maximum likelihood bootstrap (MLBP)/Bayesian posterior probability (BIPP). This study species is in bold and red font.
Figure 2 from: Isocrono D, Ravera S (2024) Typification of the name Arthopyrenia parolinii Beltr. (Ascomycota, Dothideomycetes, Pleosporales, Arthopyreniaceae). In: Wijayawardene N, Karunarathna S, Fan X-L, Li Q-R (Eds) Taxonomy and secondary metabolites of wood-associated fungi. MycoKeys 104: 1-8. https://doi.org/10.3897/mycokeys.104.109420
Figure 2 Exsiccata of Arthopyrenia parolinii Beltramini from M Lichen herbarium (M-0207340) registered as "Type Material" A the original label from Arnold personal herbarium B a fragment of linden bark, colonized by the lichen, glued to the herbarium sheet with the name of the species accredited to Beltramini and a few notes written by Massalongo.
Figure 5 from: Zhang Q-Y, Liu H-G, Li W-Y, Zhang X, Dai Y-C, Wu F, Bian L-S (2024) Three new species of Favolaschia (Mycenaceae, Agaricales) from South China. In: Wijayawardene N, Karunarathna S, Fan X-L, Li Q-R (Eds) Taxonomy and secondary metabolites of wood-associated fungi. MycoKeys 104: 71-89. https://doi.org/10.3897/mycokeys.104.117310
Figure 5 Basidiomata and microscopic structures of Favolaschia miscanthiA, B basidiomata (A Dai 24652, holotype B Dai 24653) C basidiospores D hymenium in trama E basidia and basidioles F tramal hyphae G cheilocystidia at dissepiment edge H hyphae of pileipellis I terminal cells of pileipellis. Scale bars: 5 mm (A, B); 10 µm (C–I).
Figure 1 from: Li J, Li J, Jiang N (2024) Morphology and phylogeny of Cytospora (Cytosporaceae, Diaporthales) species associated with plant cankers in Tibet, China. In: Wijayawardene N, Karunarathna S, Fan X-L, Li Q-R (Eds) Taxonomy and secondary metabolites of wood-associated fungi. MycoKeys 104: 51-70. https://doi.org/10.3897/mycokeys.104.113567
Figure 1 Maximum Likelihood tree generated from combined ITS, act, rpb2, tef1 and tub2 sequence data. Bootstrap support values ≥ 50% and Bayesian posterior probabilities ≥ 0.90 are demonstrated at the branches. Ex-type cultures are marked with (*).
Figure 6 from: Zhang Q-Y, Liu H-G, Li W-Y, Zhang X, Dai Y-C, Wu F, Bian L-S (2024) Three new species of Favolaschia (Mycenaceae, Agaricales) from South China. In: Wijayawardene N, Karunarathna S, Fan X-L, Li Q-R (Eds) Taxonomy and secondary metabolites of wood-associated fungi. MycoKeys 104: 71-89. https://doi.org/10.3897/mycokeys.104.117310
Figure 6 Basidiomata and microscopic structures of Favolaschia sinarundinariaeA, B basidiomata (A Dai 26123, holotype B Dai 26116) C basidiospores D hymenium in trama E basidia and basidioles F tramal hyphae G cheilocystidia at dissepiment edge H hyphae and terminal cells of pileipellis. Scale bars: 1 cm (A, B); 10 µm (C–H).
Figure 4 from: Li J, Li J, Jiang N (2024) Morphology and phylogeny of Cytospora (Cytosporaceae, Diaporthales) species associated with plant cankers in Tibet, China. In: Wijayawardene N, Karunarathna S, Fan X-L, Li Q-R (Eds) Taxonomy and secondary metabolites of wood-associated fungi. MycoKeys 104: 51-70. https://doi.org/10.3897/mycokeys.104.113567
Figure 4 Cytospora sibiraeicola (CAF800084, holotype) A, B canker disease symptom C conidioma D transverse section through a conidioma E longitudinal section through a conidioma F conidiophores and conidia G, H conidia. Scale bars: 2000 µm (B); 1000 µm (C–E); 10 µm (F–H).
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.