Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
371
datasets available to search
ShareScore release 0.9.0
Dataset results
371 results for “single cell genomics”
Detect genomic aberrations between PB1 and its counterpart, spindle-chromosome complex in human MII oocyte, PB2 and female pronucleus in human zygote at a single-cell level.
GEO Series GSE56676. Homo sapiens. 4 samples. Type: Genome variation profiling by genome tiling array.
Profiling mouse cochlear cell maturation using 10X Genomics single-cell transcriptomics
GEO Series GSE202920. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Human lineage tracing enabled by mitochondrial mutations and single cell genomics [CC100_scATAC]
GEO Series GSE115216. Homo sapiens. 192 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Ensembles of genome-coverage single-cell histone modifications reveal epigenetic lineages during mouse preimplantation development
GEO Series GSE235109. Mus musculus. 47 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell 3D genome structure reveals distinct human pluripotent states (RNA-Seq)
GEO Series GSE260994. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide DNA replication profiling and full-length total RNA sequencing from the same single cell [01_RPE1_midS]
GEO Series GSE278941. Homo sapiens. 77 samples. Type: Expression profiling by high throughput sequencing; Other.
Tracing the evolution of single-cell 3D genomes in Kras-driven cancers [snRNA-seq]
GEO Series GSE295452. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Integrative analysis of single cell genomics data by coupled nonnegative matrix factorizations (RNA-Seq)
GEO Series GSE115968. Mus musculus. 464 samples. Type: Expression profiling by high throughput sequencing.
Patient-Specific and Genome-Edited Induced Pluripotent Stem Cell-Derived Cardiomyocytes Elucidate Single-Cell Phenotype of Brugada Syndrome
GEO Series GSE93530. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
A highly scalable method for joint whole genome sequencing and gene expression profiling of single cells
GEO Series GSE144296. Homo sapiens. 4869 samples. Type: Expression profiling by high throughput sequencing; Other.
Single-cell RNA-sequencing of bovine fetal gonads using 10x Genomics
GEO Series GSE162952. Bos taurus. 2 samples. Type: Expression profiling by high throughput sequencing.
Targeted single-cell transcriptome readouts for high-throughput genetics and functional genomics
GEO Series GSE135497. Mus musculus; Homo sapiens. 57 samples. Type: Expression profiling by high throughput sequencing.
10x Genomics single cell RNA-sequencing of sorted CD45+ Ly6G- CD11b+ F4/80+ tumour-associated macrophages from murine mammary tumours
GEO Series GSE160641. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
10x genomics single cell sequencing of yak testis
GEO Series GSE225618. Bos grunniens x Bos taurus; Bos grunniens. 2 samples. Type: Expression profiling by high throughput sequencing.
Adapting the 10x Genomics Platform for single-cell RNA-seq in yeast reveals the importance of stochastic gene expression during the lag phase
GEO Series GSE144820. Saccharomyces cerevisiae. 5 samples. Type: Expression profiling by high throughput sequencing.
A transcriptome atlas of the mouse iris at single cell resolution defines cell types and the genomic response to pupil dilation
GEO Series GSE183690. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Multi-step genomics on single cells and live cultures in sub-nanoliter capsules
GEO Series GSE306708. Homo sapiens; Mus musculus; Escherichia coli. 22 samples. Type: Expression profiling by high throughput sequencing; Other.
Single-cell transcriptomic and targeted genomic profiling reveal CRTAM and PLCB1 as novel hub genes for anti-TNFα therapy response in Crohn's disease
GEO Series GSE269631. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Human lineage tracing enabled by mitochondrial mutations and single cell genomics [CC100_ATAC]
GEO Series GSE115215. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Multi-modal single-cell and whole-genome sequencing of minute, frozen specimens to propel clinical applications
GEO Series GSE192402. Homo sapiens. 74 samples. Type: Expression profiling by high throughput sequencing; Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.