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1,133

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Dataset results

1,133 results for “single-cell analysis”

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zenodo28/100

GO Enrichment Analysis on Single-Cell RNA-Seq Data

Open the record for dataset details and reuse information.

opencc-by-4.0Jul 2024View details →
ClinicalTrials.gov28/100

Single-Cell and Spatial Transcriptomics Analysis of Steatotic Donor Liver Susceptibility to Post-Transplant Injury

ClinicalTrials.gov study NCT07362745. IPD Sharing: NO. Countries: 1. Publications: 0.

closedIPD-NOFeb 2026View details →
geo24/100

Single-cell transcriptional analysis of human pluripotent stem cell-derived heart epicardium-myocardium organoids uncover principals of human epicardial-derived cells specification and coronary vascul

GEO Series GSE309829. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2026View details →
geo24/100

Decoding Dengue's Neurological Assault: Insights from Single-Cell CNS Analysis in a Mouse Model

GEO Series GSE252515. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2025View details →
geo24/100

Single-cell and single-nucleus transcriptome analysis of pattern formation in the early embryo of the spider Parasteatoda tepidariorum

GEO Series GSE201705. Parasteatoda tepidariorum. 3 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2022View details →
geo24/100

Drop-seq analysis of bleomycin-treated and control mouse lung single-cell suspensions

GEO Series GSE111664. Mus musculus. 10 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2018View details →
geo24/100

Single-cell transcriptomic and proteomic analysis of Parkinson’s disease brains

GEO Series GSE202210. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2022View details →
geo24/100

Single-cell RNA-sequenceing analysis of mouse intestinal organoids cultured in Matriel or type I collagen

GEO Series GSE300601. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2026View details →
geo24/100

Single-cell analysis reveals Mycobacterium tuberculosis ESX-1–mediated accumulation of permissive macrophages in infected mouse lungs

GEO Series GSE263880. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2024View details →
geo24/100

Single-cell RNA sequencing analysis reveals Greater Epithelial Ridge cells degeneration during postnatal development of cochlea in Rats

GEO Series GSE170810. Rattus norvegicus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2021View details →
geo24/100

Analysis of individual patient pathway coordination in a cross-species single-cell kidney atlas

GEO Series GSE291551. Homo sapiens; Mus musculus. 11 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2025View details →
geo24/100

Reference component analysis of single-cell transcriptomes elucidates cellular heterogeneity in human colorectal tumors

GEO Series GSE81861. Homo sapiens. 1220 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2017View details →
geo24/100

Single-cell RNAseq analysis of peripheral blood and tumor infiltration immune cells in glioblastoma

GEO Series GSE247824. Homo sapiens. 37 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2025View details →
geo24/100

Spatiotemporal single-cell analysis of gene expression in the mouse suprachiasmatic nucleus

GEO Series GSE118403. Mus musculus. 82 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2019View details →
geo24/100

Single-cell analysis of human PBMCs in healthy and type 2 diabetes populations: Dysregulated immune networks in type 2 diabetes unveiled through single-cell profiling

GEO Series GSE268210. Homo sapiens. 30 samples. Type: Expression profiling by high throughput sequencing; Other.

openGEO-OpenJun 2024View details →
geo24/100

High resolution mapping of the tumor microenvironment using integrated single-cell, spatial and in situ analysis

GEO Series GSE243280. Homo sapiens. 7 samples. Type: Other; Expression profiling by high throughput sequencing.

openGEO-OpenOct 2023View details →
geo24/100

Analysis of single-cell RNA-seq data from human PBMCs and from in vitro cultures of human cord blood CD34+ progenitors encompassing different DC types

GEO Series GSE115405. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2018View details →
geo24/100

Single-cell RNAseq analysis (10X Genomics Chromium) of cMAF- and Mafb-deficent lung monocytes and interstium macrophages

GEO Series GSE193891. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2023View details →
geo24/100

Single-cell analysis of mouse plasmacytoid dendritic cells (pDCs) unravels their activation trajectory and their molecular regulation in vivo during a viral infection [FB5P-seq_kinetic]

GEO Series GSE151245. Mus musculus. 15 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2020View details →
geo24/100

Comparative analysis between single-cell RNA-seq and single-molecule RNA FISH indicates that the pyrimidine nucleobase idoxuridine (IdU) globally amplifies transcriptional noise

GEO Series GSE263194. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2024View details →

ScienceDex guides

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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record