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91 results for “single-nucleus RNA sequencing”

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geo24/100

Single-nucleus RNA sequencing of gastrocnemius and plantaris muscles.

GEO Series GSE185678. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2022View details →
geo24/100

Single-nucleus RNA and ATAC sequencing of IDH1 mutant gliomas

GEO Series GSE205771. Homo sapiens. 5 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2023View details →
geo24/100

Single-nucleus RNA sequencing of dorsolateral prefrontal cortex from normal, pathological aging, and Alzheimer’s disease human brains

GEO Series GSE243292. Homo sapiens. 15 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2023View details →
geo24/100

Single-nucleus RNA sequencing of the kidney from an early-stage chronic calcineurin inhibitor nephrotoxicity mouse model

GEO Series GSE283130. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2025View details →
geo24/100

Single-nucleus RNA-sequencing reveals NRF1/NFE2L1 as a key determining metabolic state and fate decision of brown adipocytes in mice [bulk RNA-seq]

GEO Series GSE225279. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2023View details →
geo24/100

Single-nucleus RNA-sequencing reveals singular gene signatures of human ductal cells during adaptation to insulin resistance

GEO Series GSE207393. Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2022View details →
geo24/100

Single-nucleus RNA sequencing of intermediates during human primed and naïve reprogramming.

GEO Series GSE147564. Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2020View details →
geo24/100

Benchmarking of Computational Demultiplexing Methods for Single-Nucleus RNA Sequencing Data [dataset 1]

GEO Series GSE298265. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2025View details →
geo24/100

Joint single-nucleus RNA sequencing and single-nucleus ATAC sequencing of neuroblastoma cell lines

GEO Series GSE262189. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenSep 2024View details →
geo24/100

Single-nucleus RNA sequencing reveals transcriptional changes of hippocampal neurons in APP23 mouse model of Alzheimer’s disease

GEO Series GSE141044. Mus musculus. 11 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2019View details →
geo24/100

Molecular diversity of auditory critical period plasticity revealed by single-nucleus RNA sequencing

GEO Series GSE140883. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2020View details →
geo24/100

Single-nucleus methylcytosine and transcriptome sequencing in pollen reveals antagonism between MBD5/6 and MBD7 in transcriptional regulation [RNA-seq]

GEO Series GSE275698. Arabidopsis thaliana. 40 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2025View details →
geo24/100

Single-nucleus RNA sequencing of human subcutaneous adipose tissue biopsies from 68 Finnish participants.

GEO Series GSE274778. Homo sapiens. 68 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2024View details →
geo24/100

Dissection of tumor-intrinsic and tumor-extrinsic features of MIT/TFE translocation renal cell carcinoma via single-nucleus RNA sequencing

GEO Series GSE269466. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2024View details →
geo20/100

Characterization of human mosaic Rett syndrome brain tissue by single-nucleus RNA sequencing

GEO Series GSE113673. Homo sapiens; Mus musculus. 20 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenNov 2018View details →
geo20/100

Single-nucleus RNA sequencing of the prefrontal cortex from mice lacking glutaminase 1 in CamKIIa-positive neurons and control mice

GEO Series GSE233639. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2023View details →
geo20/100

Single-nucleus RNA sequencing of ex vivo precision-cut lung slices from normal human lung tissue

GEO Series GSE309373. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2025View details →
geo20/100

Spatial transcriptomics and single-nucleus RNA-sequencing reveal a transcriptomic atlas of human spinal cord [Spinal snRNA-seq]

GEO Series GSE243076. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2024View details →
geo20/100

Single-nucleus RNA sequencing dataset of diverse tissues from wild-type monkey and Tau-P301L transgenic monkey

GEO Series GSE317176. Macaca fascicularis. 24 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2026View details →
geo20/100

Single-nucleus RNA sequencing-based construction of a hippocampal neuron atlas in mice with epileptic memory impairment

GEO Series GSE241349. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2024View details →

ScienceDex guides

Understand access before you commit

These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record

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