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124
datasets available to search
ShareScore release 0.9.0
Dataset results
124 results for “somatic mutation”
Recurrent somatic mutations in POLR2A define a distinct subset of meningiomas [array]
GEO Series GSE84263. Homo sapiens. 121 samples. Type: Expression profiling by array.
A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa
GEO Series GSE132939. Populus trichocarpa. 85 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.
Multiplexed functional genomic analysis of somatic 5' untranslated region mutations across the spectrum of human prostate cancer (Ribosome Profiling)
GEO Series GSE130465. Homo sapiens. 30 samples. Type: Expression profiling by high throughput sequencing; Other.
Discovery of autism/intellectual disability somatic mutations in Alzheimer's brains: mutated ADNP cytoskeletal impairments and repair as a case study
GEO Series GSE113524. Homo sapiens. 39 samples. Type: Expression profiling by high throughput sequencing.
EZH2 is required for germinal center formation and somatic EZH2 mutations promote lymphoid transformation
GEO Series GSE45982. Mus musculus; Homo sapiens. 61 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Molecular profiles (somatic mutations, gene expression and DNA methylation) of multiple pattern-annotated lung adenocarcinoma tumor regions.
<p>Please refer to the methods section of the paper for more detailed explanations. In summary:</p> <ul> <li><strong>chuv_molecular_dataset_annotation.xlsx</strong>: table containing clinical information for each patient, molecular profiles available for each sample, histologic pattern annotation and driver mutations detected.</li> <li><strong>CHUV_MAF.txt</strong>: MAF file containing mutations found in each sample. Mutations were called using GATK4 pipeline and Mutect2. Filtered .vcf files were converted into maf files using vcf2maf. Annotations to patient, region and samples are reported in additional columns.</li> <li><strong>CHUV_DNAmethylation_BetaValues_ComBat.txt</strong>: DNA methylation beta values generated with minfi and batch-corrected with ComBat.</li> <li><strong>CHUV_GeneExpression_RsemExpectedCounts.txt</strong>: Gene-level expression counts computed with RSEM.</li> <li><strong>CHUV_GeneExpression_log2TPM_ComBat.txt</strong>: Gene-level expression normalized as log2(TPM+1) computed with RSEM and batch-corrected with ComBat.</li> </ul>
Data from: NF1-glioblastoma clonal profiling reveals KMT2B mutations as potential somatic oncogenic events
none
SMS - Study of Somatic Mutations Using Genome Sequencing
ClinicalTrials.gov study NCT06851052. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Mechanisms of Somatic Mutation and Tumor Initiation in Pre-malignant Kidney Tubule Cells
ClinicalTrials.gov study NCT06194669. IPD Sharing: Not stated. Countries: 1. Publications: 0.
SMS 2: Impact of Cancer Therapy on the Somatic Mutational Landscape of Normal Tissues
ClinicalTrials.gov study NCT06832150. IPD Sharing: NO. Countries: 1. Publications: 0.
Efficacy of Olaparib in Advanced Cancers Occurring in Patients With Germline Mutations or Somatic Tumor Mutations in Homologous Recombination Genes
ClinicalTrials.gov study NCT03967938. IPD Sharing: NO. Countries: 1. Publications: 0.
Linking Somatic Mutation Rate With Baseline Exposure in East Palestine
ClinicalTrials.gov study NCT06357845. IPD Sharing: YES. Countries: 1. Publications: 0.
Determination of the Feasibility of Tumoural Somatic Mutations Detection in Blood of Patients With Ovarian Cancer
ClinicalTrials.gov study NCT03881683. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Dermatologic Patterns of Tuberous Sclerosis Patients and Somatic Mutation Relationship
ClinicalTrials.gov study NCT04112537. IPD Sharing: UNDECIDED. Countries: 1. Publications: 0.
Somatic Mutation in Chronic Liver Disease
ClinicalTrials.gov study NCT06656767. IPD Sharing: NO. Countries: 1. Publications: 0.
Liquid Biopsies for Detecting Somatic Mutations in Sporadic Cerebral Arteriovenous Malformations.
ClinicalTrials.gov study NCT07103304. IPD Sharing: NO. Countries: 1. Publications: 0.
MS Detection of Somatic Mutations in Hematological Malignancies
ClinicalTrials.gov study NCT03771079. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Next-generation Sequencing of Colorectal Cancer Somatic Cells to Guide Genetic Susceptibility Gene Mutations Screening.
ClinicalTrials.gov study NCT04280666. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Exploring the Landscape of Somatic Mutations in Human Tissue
ClinicalTrials.gov study NCT06585800. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Backtracking Leukemia-Typical Somatic Mutations in Cord Blood
ClinicalTrials.gov study NCT05014165. IPD Sharing: Not stated. Countries: 1. Publications: 0.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.