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82 results for “x-ray structure”
C D FIGURE 8 in X-ray Microanalysis and the Chemical Elemental Composition of Gorgonian and Pennatulacean Axial Structures (Anthozoa, Octocorallia)
C D FIGURE 8. Energy dispersive spectrometer (EDS) linescan dataset. (A) EDS linescan site of interest BSE image in a cross-sectional view of a sea pen Cavernularia sp. axial skeleton acquired by INCA Energy software using same region as Figure 7, horizontal linescan through the middle of the axis was applied for EDS analysis to examine the distribution of elements along the line. (B) Element linescan result displaying grouped linescans as colored: carbon (red), oxygen (orange), fluorine (yellow), sodium (light green), magnesium (green), aluminum (aqua), sulfur (light blue), calcium (blue), strontium (purple), ytterbium (pink). (C) Sum spectrum of the linescan. Scale bar = 300 μm. (D) Bar chart of the quantitative results from the sum spectrum.
FIGURE 4 in X-ray Microanalysis and the Chemical Elemental Composition of Gorgonian and Pennatulacean Axial Structures (Anthozoa, Octocorallia)
FIGURE 4. Energy dispersive spectrometer (EDS) area scan dataset. (A) EDS site of interest BSE image in a cross-sectional view of a gorgonian Plumigorgia hydroides axial skeleton acquired by INCA Energy software using same region as Figure 3, partial area scan was applied due to the visible topographical differences of the surfaces on both sides of the axis, thus only two small areas were selected for EDS analysis. Scale bar = 300 μm. (B) Bar chart of the quantitative results from (C) spectrum 1 for reference in that the analytical results of the two sites are identical as seen in Table 2.
Replication data for "Single-shot X-ray ptychography as a structured illumination method"
<p>Replication data for "Single-shot X-ray ptychography as a structured illumination method," published in Optics Letters on January 15, 2025 at <a href="https://doi.org/10.1364/OL.545836">https://doi.org/10.1364/OL.545836</a>. The author's accepted manuscript is available on the arXiv at <a href="https://doi.org/10.48550/arXiv.2410.19197">https://doi.org/10.48550/arXiv.2410.19197</a>.</p>
Molecular dynamics simulations of BmrA starting from X-ray and cryo-EM structure
<p>This archive contains all the MD trajectories presented in the article<br> 'Drug-bound and -free outward-facing structures of a multidrug ABC exporter point to a swing mechanism'<br> by Chaptal et al,<br> https://doi.org/10.1101/2021.03.12.435132</p> <p><br> MD simulations of the BMRA Xray structure:<br> - 4 replicates with short equilibration:<br> BMRA_Xray_run1<br> BMRA_Xray_run2<br> BMRA_Xray_run3<br> BMRA_Xray_run4 <br> - 2 replicates with long equilibration:<br> BMRA_Xray_run5<br> BMRA_Xray_run6</p> <p>MD simulations of the BMRA Cryo-EM:<br> - 4 replicates with short equilibration:<br> BMRA_Cryo_run1<br> BMRA_Cryo_run2<br> BMRA_Cryo_run3<br> BMRA_Cryo_run4<br> - 2 replicates with long equilibration:<br> BMRA_Cryo_run5<br> BMRA_Cryo_run6</p> <p>MD simulations of BMRA + R6G:<br> BMRA_R6G_run1<br> BMRA_R6G_run2<br> BMRA_R6G_run3</p> <p> </p>
Movie 1 from: Schmidt J, Belousov I, Michalik P (2016) X-ray microscopy reveals endophallic structures in a new species of the ground beetle genus Trechus Clairville, 1806 from Baltic amber (Coleoptera, Carabidae, Trechini). ZooKeys 614: 113-127. https://doi.org/10.3897/zookeys.614.9283
Movie 1 - Trechus exhibitorius sp. n., holotype, volume rendering of the aedeagal median lobe with endophallus. YouTube link: https://youtu.be/u7hzlyrxOTA
Figure 15 from: Schmidt J, Belousov I, Michalik P (2016) X-ray microscopy reveals endophallic structures in a new species of the ground beetle genus Trechus Clairville, 1806 from Baltic amber (Coleoptera, Carabidae, Trechini). ZooKeys 614: 113-127. https://doi.org/10.3897/zookeys.614.9283
Figure 15 - Trechus exhibitorius sp. n., holotype, volume rendering of the aedeagal median lobe with endophallus. a right lateral aspect b dorsal aspect c left lateral aspect d, same as c, but with contours of the two copulatory pieces indicated by coloured lines.
Figures 13-14 from: Schmidt J, Belousov I, Michalik P (2016) X-ray microscopy reveals endophallic structures in a new species of the ground beetle genus Trechus Clairville, 1806 from Baltic amber (Coleoptera, Carabidae, Trechini). ZooKeys 614: 113-127. https://doi.org/10.3897/zookeys.614.9283
Figures 13-14 - Trechus exhibitorius sp. n., holotype, volume rendering of selected body parts. 13 frontal view inside the abdomen showing the aedeagus which is fixed between the last abdominal segments 14 right front leg with protarsi i-v. Abbreviations: B = air bubble; cpa = apex of the longer copulatory piece; mla = median lobe apex; mlb = basal bulb of median lobe; pm = parameres; st = sternites; tg = tergites.
Figures 7-12 from: Schmidt J, Belousov I, Michalik P (2016) X-ray microscopy reveals endophallic structures in a new species of the ground beetle genus Trechus Clairville, 1806 from Baltic amber (Coleoptera, Carabidae, Trechini). ZooKeys 614: 113-127. https://doi.org/10.3897/zookeys.614.9283
Figures 7-12 - Trechus exhibitorius sp. n., holotype, volume rendering of selected body parts. 7 head, ventral aspect 8 head, anterior part, dorsal aspect 9 mandibles, view from dorsal (the dorsal surface of the right mandible is cut together with the labrum in order to show the mandibular dentition; the contour of the apical portion of the right mandible is indicated by a dotted line) 10 elytra, caudal aspect 11 elytral epipleuron and left external part of metathorax 12 elytra and abdomen, right lateral aspect. Abbreviations: aed = aedeagus; cl = clypeus; hs = humeral series; lbr = labrum; M = phoretic mite; meps = metepisternum; ms = medial series; mt = mentum; pas = preapical seta; rst = recurrent stria; sas = subapical series; smt = submentum; ta, tb, tm = apical, basal, medial denticle of the right mandible.
Figures 4-6 from: Schmidt J, Belousov I, Michalik P (2016) X-ray microscopy reveals endophallic structures in a new species of the ground beetle genus Trechus Clairville, 1806 from Baltic amber (Coleoptera, Carabidae, Trechini). ZooKeys 614: 113-127. https://doi.org/10.3897/zookeys.614.9283
Figures 4-6 - Trechus exhibitorius sp. n., volume rendering of the holotype, anterior portion. 4 dorsal aspect 5 ventral aspect 6 right lateral aspect.
Figures 1-3 from: Schmidt J, Belousov I, Michalik P (2016) X-ray microscopy reveals endophallic structures in a new species of the ground beetle genus Trechus Clairville, 1806 from Baltic amber (Coleoptera, Carabidae, Trechini). ZooKeys 614: 113-127. https://doi.org/10.3897/zookeys.614.9283
Figures 1-3 - Trechus exhibitorius sp. n., light microscopic images of the holotype. 1 general view of the fossil with contours of the amber piece 2 left lateral aspect 3 dorsal aspect.
Fig. 5. X-ray ORTEP drawing for 2a in Meroterpenoids with diverse structures and anti-inflammatory activities from Rhododendron anthopogonoides
Fig. 5. X-ray ORTEP drawing for 2a.
Structure and distribution of chalky deposits in the Pacific oyster using x-ray computed tomography (CT)
Open the record for dataset details and reuse information.
Data from: New Crystal Forms and Amorphous Phase of Sophoricoside: X-Ray Structures and Characterization
Open the record for dataset details and reuse information.
Data from: Identification of allosteric disulphides from labile bonds in X-ray structures
Open the record for dataset details and reuse information.
Electronic structure fingerprints of nickel-cobalt-manganese oxide from x-ray spectroscopy and high-throughput ab initio calculations
<p>AiiDA archives of the calculations presented in the paper "Electronic structure fingerprints of nickel-cobalt-manganese oxide from x-ray spectroscopy and high-throughput <em>ab initio</em> calculations".</p> <p> </p> <ul> <li>structures_and_general_info.aiida: The "EnumlibCalcJob" to generate the structural candidates, the resulting initial structures and AiiDA "Dict" nodes containing the mapping of the different steps (via their corresponding <em>uuid</em>) to each structure.</li> <li>pre_optimization.aiida: The relevant calculations to perform the pre-relaxation.</li> <li>optimization.aiida: The relevant calculations to perform the final structural optimization.</li> <li>electronic_structure.aiida: The bandstructure and DOS/PDOS calculations. All preliminary calculations such as SCF and NSCF calculations to obtain the eigenvalues are included as well.</li> </ul> <p>Finally, the Pandas DataFrame containing the PDOS for each site of all the structures (resolved into orbital and spin contributions) which builds the foundation for the presented analysis is stored in the `pickle` format in `pdos_all.pckl`.</p>
Figure 16 from: Schmidt J, Belousov I, Michalik P (2016) X-ray microscopy reveals endophallic structures in a new species of the ground beetle genus Trechus Clairville, 1806 from Baltic amber (Coleoptera, Carabidae, Trechini). ZooKeys 614: 113-127. https://doi.org/10.3897/zookeys.614.9283
Figure 16 - Trechus exhibitorius sp. n., reconstruction of the external shape in dorsal view.
Vascular Optimized Radiotherapy Tuned to Critical Structures for Erectile Function Using High-Precision X-Ray Treatment
ClinicalTrials.gov study NCT07293585. IPD Sharing: NO. Countries: 1. Publications: 0.
FIGURE 9. X-ray images showing internal structures. A in The test architecture of Clypeaster (Echinoidea, Clypeasteroida) and its phylogenetic significance
FIGURE 9. X-ray images showing internal structures. A, Clypeaster telurus Clark, 1914; NHM 1953.1.24.34. B, Clypeaster subdepressus (Gray, 1825); NHM 1962.7.2.11. C, Clypeaster rarispinus de Meijere, 1902; NHM 1968.12.6.69. D, Clypeaster humilis Leske, 1778; NHM EE14009. E, Clypeaster ravenelii (Agassiz, 1869); NHM 1937.5.9.18. F, Clypeaster annandalei Koehler, 1922; NHM 1948.12.9.122. Not to scale.
XMM-Newton Large-Scale Structure Deep Full-Exposure X-Ray Source Catalog
This table contains some of the X-ray results from the final release of the multiwavelength XMM-Large Scale Structure (LSS) data set, covering the full survey area of 11.1 deg<sup>2</sup>. The 124 XMM-Newton observations used in the complete XMM-LSS are described in Section 2 and Table 1 of the primary reference paper (Chiappetti et al. 2013, hereafter Paper II). The X-ray data were processed with the latest XMM-LSS XAMIN pipeline version. The catalogs in Paper II supersede the catalog from the first paper in this series (Paper I: Pierre et al. 2007, MNRAS, 382, 279, available at the HEASARC as the XMMLSS table) pertaining to the initial 5 deg<sup>2</sup>. The authors provide X-ray source lists in the customary soft and hard energy bands (0.5-2 keV and 2-10 keV, respectively) for a total of 6721 objects in the deep full-exposure 2XLSSd catalog presented in this table, and 5572 objects in the catalog limited to 10 ks exposures (available at the HEASARC as the XMMLSS10KS table), above a detection likelihood of 15 in at least one band. At the XMMLSS web site which they maintain (<a href="http://cosmosdb.iasf-milano.inaf.it/XMM-LSS/">http://cosmosdb.iasf-milano.inaf.it/XMM-LSS/</a>), the authors also provide a multiwavelength catalog, cross-correlating their list of X-ray sources with infrared, near-infrared, optical and ultraviolet catalogs. Customary data products, such as X-ray FITS images and thumbnail images from the Canada-France-Hawaii Telescope Legacy Survey and the Spitzer Wide-Area Infrared Extragalactic Survey, are made available there, together with their data base in Milan, which can be queried interactively. In this table, the authors provide the source list for the full area (11.1 square degrees) of the XMM-LSS, with a total of 6721 point-like or extended sources above a detection likelihood of 15 in either the 0.5-2 or 2-10 keV bands. This table, the 2XLSSd "deep catalog" version containing the result of the analysis of the full-length exposures, lists the main X-ray parameters, while further multiwavelength parameters and data products (X-ray images and optical/IR thumbnails) are available at the Milan XMM-LSS database site referenced above. It supersedes the first XMM-LSS version (Pierre et al. 2007, available at the HEASARC as the XMMLSS table). Analogously to Paper I, only sources with an off-axis angle < 13 arcmin were processed by the authors' X-ray data processing pipeline software, XAMIN. The catalog includes all the extended sources classified in the customary C1 and C2 classes (see Section 3.6 of Paper II) plus all point-like sources with a point source detection likelihood (DET_LH) greater than 15 (so-called non-spurious sources). This table was created by the HEASARC in February 2013 based on the <a href="https://cdsarc.cds.unistra.fr/ftp/cats/J/MNRAS/429/1652">CDS catalog J/MNRAS/429/1652</a> file 2xlssd.dat. This is a service provided by NASA HEASARC .
XMM-Newton Large-Scale Structure Uniform 10-ksec Exposure X-Ray Source Catalog
This table contains some of the X-ray results from the final release of the multiwavelength XMM-Large Scale Structure (LSS) data set, covering the full survey area of 11.1 deg<sup>2</sup>. The 124 XMM-Newton observations used in the complete XMM-LSS are described in Section 2 and Table 1 of the primary reference paper (Chiappetti et al. 2013, hereafter Paper II). The X-ray data were processed with the latest XMM-LSS XAMIN pipeline version. The catalogs in Paper II supersede the catalog from the first paper in this series (Paper I: Pierre et al. 2007, MNRAS, 382, 279, available at the HEASARC as the XMMLSS table) pertaining to the initial 5 deg<sup>2</sup>. The authors provide X-ray source lists in the customary soft and hard energy bands (0.5-2 keV and 2-10 keV, respectively) for a total of 5572 objects in the catalog limited to 10 ks exposures presented in this table, and a total of 6721 objects in the deep full-exposure 2XLSSd catalog (available at the HEASARC as the XMMLSSDEEP table), above a detection likelihood of 15 in at least one band. At the XMMLSS web site which they maintain (<a href="http://cosmosdb.iasf-milano.inaf.it/XMM-LSS/">http://cosmosdb.iasf-milano.inaf.it/XMM-LSS/</a>), the authors also provide a multiwavelength catalog, cross-correlating their list of X-ray sources with infrared, near-infrared, optical and ultraviolet catalogs. Customary data products, such as X-ray FITS images and thumbnail images from the Canada-France-Hawaii Telescope Legacy Survey and the Spitzer Wide-Area Infrared Extragalactic Survey, are made available there, together with their data base in Milan, which can be queried interactively. In this table, the authors provide the source list for the full area (11.1 square degrees) of the XMM-LSS, with a total of 5572 point-like or extended sources above a detection likelihood of 15 in either the 0.5-2 or 2-10 keV bands. This table, the "standard" 2XLSS catalog containing the results of the analysis of the survey area using uniform 10-ksec exposures for all pointings longer than 10 ksec, lists the main X-ray parameters, while further multiwavelength parameters and data products (X-ray images and optical/IR thumbnails) are available at the Milan XMM-LSS database site referenced above. It supersedes the first XMM-LSS version (Pierre et al. 2007, available at the HEASARC as the XMMLSS table). Analogously to Paper I, only sources with an off-axis angle < 13 arcmin were processed by the authors' X-ray data processing pipeline software, XAMIN. The catalog includes all the extended sources classified in the customary C1 and C2 classes (see Section 3.6 of Paper II) plus all point-like sources with a point source detection likelihood (DET_LH) greater than 15 (so-called non-spurious sources). This table was created by the HEASARC in February 2013 based on the <a href="https://cdsarc.cds.unistra.fr/ftp/cats/J/MNRAS/429/1652">CDS catalog J/MNRAS/429/1652</a> file 2xlss.dat. This is a service provided by NASA HEASARC .
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